Blg03293.0 (mRNA) - B. lanceolatum

Overview
NameBlg03293.0
Unique NameBlg03293.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:968714..972447-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03293.0 ID=Blg03293.0|Name=Blg03293.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3734bp|location=Sequence derived from alignment at Sc0000020:968714..972447- (Branchiostoma lanceolatum)
ATGCAGCTCCAAGGCGAGCTGAAGTCCCGCGGAACATACCAGCGCCATTA CCGTAATGTGTTCCACGCCTTCCTTACCGTTGGCCGCGTGGACGGGCTGC TGGCCCTACAGAAGGGCCTTGTGCCGGCGTTATGGTACGGAGAGAATAGA AAAAACAGAGGAGTTAGAATAATGGGTGTGTCTTGGTTTAGCCTGGGTGC CAGCCTTTTTAGCTTGGTTACCATGTCATTGAGACTAAAGCCCCCCTCTC ACTGGACCCGTGTCACACTGGCGGTGTAGCTACGGCCGATCGAATTGACA AAGAACTCAAGGAATTTCATTGACAAAAAGCGAATCTTTTGTGTTTTTTG TTGTCTTTTTGGTCATACTTGTACGATTTGAATGATATTCCCATTGTAAA GTCAAGGGCAACACAAATCTAGTTTAGGACGCAGCAAATTGATCGAACTC AGATATCTGTTTTTTAATTTGCTAGCGCTTGCAAAACAAGTCATAATGCC CAAATTTGCAGTAGCACAGCCGTCTAATTGTATGCATTGTAAGACACTTG AAATACAGTACTTGAAGAAGTCCATGTCTAATTTGAAGTAATTTTACAAA ATACTGATGCCAGTAGAAGTCTTTGTTTGAAATTAAGTTCAAAACAGTAA AATTCATTCATTCACTTACTCACTCACTCACCCCTCACTTGCTCACTCGC CACATACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCA CTCACTCACTCACCCCTCACTCACTCACTCACTCACTCACCCCTCACTCA CTCACTCACTCACCCCTCACTCTCTCACTCACTCACTCACTCACTCACCC CTTAATCAGTCTCTCACTCACTTACTCGCCACTCACTCAATCACTCACTT GAGGTCCCATAGCTAAGAATTAAATTGTAAAATTAGCAACACAGTATTAC TACATTAACCCATTTGCCGCCGTTTTTCAGGTACCAGTTTTTCATGAACG GAGTTCGACTGGGCACGTACCAGACCCTGGACAACCTCGGTCTGACCACA GACAAAGATGGGAACGTGGTGTGGTGGAGAAGTATTGTGGCAGGGGCAGC TTCGGGTTGTGCAGGAGCCTTTGTTGGCAGTCCTATCTATATGGTCAGTA CACATGCCTGCCATCTAGTACAGCAATACAGCTTTTAACTGAATACCAAG AACACAAGATAATAAATGTCGTAACTAGCATTCAAAAGCCAATTGCAGAA CTGCGGACACACACCAATACAAACAAATAAGCAAACAAACAAATACACTT CCATTTTCATGGGGATGAAAAAAGAATGGTGATTTTTTTTAATGATTAGC AAGTTGGGAGGGCACGTGTAAATACTGTACCGTCATTGTCAACCAGTGCT TTCTCCACCATAAGTACATGTATTTCCAACATAACGTTAAATTAAGTAAC AGACACAGGAAAATACGACTTCCGTATGTAAACAGGTACTGAGGAGCATA TCCATGAAGGACAACCTAAAGTTAGAAGGATATGATGGGCCAAATATGGG CATAGAGTGGTACCACCTCAGTCACACCCCCAACACGCCCACCCTCCCCA CCAATCAGAGGCCATGTTTACCTTTTAAAGGGCTCCTGACTTTTTGACCC CCTTTCATTTCCCCATTGATTGTTGTGGCAGCTGAAAGCTTGTAGAAATG ACAAATTCCTGGTTACTAAGCACTCTGTGAACTTGGCCTTCTTCAAATAA GAACCTTTATGGCTTTAGCACATTGACGTAGCAATTTGGCAGCCCATTCT CTATTGGTTACAGAGTTAGGGAGAAGATTAAACATGAAAATAACAGGGAA CAAAAATTGAGAAATACAAAATGTGTGATCTATGAATTCATAGCTTAAGA GTAAAACTGGTTCAGTTCAGTCATCCTTTAGGTGACGCCATAAGGTTTAA CAACAGTTGAGAATAAATTCAAGAATGTATGTAATATATATATATTGTTA TCTAACTGAAATAAAATGCTGTGTAGGTAGTCAAATACATGTACATGAAA ATGATGACCATTGGTACAATCACAACCTACGTGAATATGTGTGGGTACTA GTATGTACCCTGAGTACCAGTACAGTACTGTGAAAATCATTTAGGTACAG GACCAAAATACTGGAACAACAATGGACTGGTACTGTACCTGAATAGACTT ACACTGGTGTGTATAACTTTTTTACATATTTTGTTACTAAATACTTGTTA TCCCTACCCAAGGACATTATCATGTAATGAAAACATTGTGTGGTCGTTGA GATCAGCACAATTTTTTATTTGAGATCCTCTTGAAAGCATGGATTCTCTG CATAAGATACCTGAATTCTAGATAAACGGGCTATAAAAATACCTGTCCTA CAATGTGCTGGGCCGATTTGCACCCAGGAAAAAGGTGTTTGCTGAAGATG TACGACTTTGTCTTATGCCGTTGTCGTATGTCCAGAAATTTTCCCATTGT AAATTGGGTCAAACATTCAGTTAACTGTTTATGCATGTTCTGTTGTCAAA AAGTTCAGATAGATTTGTAAACTTCTTTACCAGTAGCTGAACCTGATGTT GTGTTTAGCTACACATCCCAATGTCAGAGGCTTTTTATTGCAATAATCTG CTTTCATTTCTAACCCAGGTGAAAACCCAGCTCCAATCCCGGTCAGCCTC CACCATTGCTGTGGGTCACCAACACACCCACGCCAGCATGACCCAGGCAT TAAGGGGTATTTACAAGGAGTATGGCATTCTGGGACTGTGGCGAGGGGTC AGCGGGGCCATGCCAAGGGTCACAGTGGGGTCGGCAGCCCAGCTCAGCAC GTTTGCCATTTCCAAGGAGAAAATACAGAACTTAGGGGTAGGAGACTTTC AATTTCTCTCTCTGTCTCTCTCTTTCTGTCTCTCTCTCTTTCTCTCTGTC GCTCTCCGTCTCTCTCTCTGTCTCTCTCTCCCTCTCTCTGTCTCTCTCTC TCTGTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTTTCTT TCTCTCTGTCTCTCTCCATCTCTCTCTCTGTCTCTCTCTCCCTCTCTCTC TCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTG TCTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCCC ACCGTCGAGAGGAACGTCGGATAAAGCGCCTTTCCCAAGGGCACAAGATT GGTCACATGACAGGATTTGAACCCAGGACTTCTGGGTTCTGGGCCAAACA TGACCCCACTGGTAACCAACAAAAAAAAAAGAAATTCAAATTGATATAAT TGGATGGTAATATGGAAAATTTCATGACCGATAACTTCTGAATCTGCTCC CTTGCAGATCTTTCCACACCACAGTTTCGCAGTGCCGATGTTGGGTGCCA TGGTGAGCAGCGTCGTCGTGGTGACGTTCATGACGCCGTTCGACGTCGTT AGCACGCGACTCTACAACCAGCCCGTGGACGCCCGCGGGAAGGGAACCTT GTACCGAGGAGTTTGGGACTGTTTCCAGAAAATATTCCACAAGGAGGGCA TCTGGGGATTCTACAAAGGGACGGCTGCATCATATTTCCGCCTGGGACCG CACACAATTTTGAGCCTGCTTTTCTGGGATCGCTTCAGAGAACTTTACTT ACATCTTGGGAAGGGAAGAGATTCTGCAGTATAG

Coding sequence (CDS) from alignment at Sc0000020:968714..972447-

>Blg03293.0 ID=Blg03293.0|Name=Blg03293.0|organism=Branchiostoma lanceolatum|type=CDS|length=843bp|location=Sequence derived from alignment at Sc0000020:968714..972447- (Branchiostoma lanceolatum)
ATGCAGCTCCAAGGCGAGCTGAAGTCCCGCGGAACATACCAGCGCCATTA
CCGTAATGTGTTCCACGCCTTCCTTACCGTTGGCCGCGTGGACGGGCTGC
TGGCCCTACAGAAGGGCCTTGTGCCGGCGTTATGGTACCAGTTTTTCATG
AACGGAGTTCGACTGGGCACGTACCAGACCCTGGACAACCTCGGTCTGAC
CACAGACAAAGATGGGAACGTGGTGTGGTGGAGAAGTATTGTGGCAGGGG
CAGCTTCGGGTTGTGCAGGAGCCTTTGTTGGCAGTCCTATCTATATGGTG
AAAACCCAGCTCCAATCCCGGTCAGCCTCCACCATTGCTGTGGGTCACCA
ACACACCCACGCCAGCATGACCCAGGCATTAAGGGGTATTTACAAGGAGT
ATGGCATTCTGGGACTGTGGCGAGGGGTCAGCGGGGCCATGCCAAGGGTC
ACAGTGGGGTCGGCAGCCCAGCTCAGCACGTTTGCCATTTCCAAGGAGAA
AATACAGAACTTAGGGATCTTTCCACACCACAGTTTCGCAGTGCCGATGT
TGGGTGCCATGGTGAGCAGCGTCGTCGTGGTGACGTTCATGACGCCGTTC
GACGTCGTTAGCACGCGACTCTACAACCAGCCCGTGGACGCCCGCGGGAA
GGGAACCTTGTACCGAGGAGTTTGGGACTGTTTCCAGAAAATATTCCACA
AGGAGGGCATCTGGGGATTCTACAAAGGGACGGCTGCATCATATTTCCGC
CTGGGACCGCACACAATTTTGAGCCTGCTTTTCTGGGATCGCTTCAGAGA
ACTTTACTTACATCTTGGGAAGGGAAGAGATTCTGCAGTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03293.0Blg03293.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03293.0-exon-Sc0000020-1570713199:972314..972447Blg03293.0-exon-Sc0000020-1570713199:972314..972447Branchiostoma lanceolatumexon
Blg03293.0-exon-Sc0000020-1570713199:971305..971467Blg03293.0-exon-Sc0000020-1570713199:971305..971467Branchiostoma lanceolatumexon
Blg03293.0-exon-Sc0000020-1570713199:969561..969779Blg03293.0-exon-Sc0000020-1570713199:969561..969779Branchiostoma lanceolatumexon
Blg03293.0-exon-Sc0000020-1570713199:968714..969040Blg03293.0-exon-Sc0000020-1570713199:968714..969040Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:968714..972447 -
Properties
Property NameValue
GeneIDBlg03293