Blg03286.0 (mRNA) - B. lanceolatum

Overview
NameBlg03286.0
Unique NameBlg03286.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:1628022..1630738+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03286.0 ID=Blg03286.0|Name=Blg03286.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2717bp|location=Sequence derived from alignment at Sc0000020:1628022..1630738+ (Branchiostoma lanceolatum)
ATGGGTGTCGCCCTAATGTCGATCAGATCCTTTTTCAGACACCAGGAGCG GGTATTGTTTAAAGCTGTTTATCAACTGTGGGCGGAGCGCCAGGTGTGGG ATCTCAGCCTCCTCCAGGCAGAGAGAGAGCCTATCATCTGTGGTGGTGAT GGACGTGCGGACACACCAGGGCATTCTGCCAAATATGGCACCTATACCAT GATGGAGCTCAGGAAGAATGTTGTGATTGATGTGCAACTTGTGCAGGTAT AGTTTACTTGTCTTATAATATCATGTAGGGCTGGTACAGGTTTATCCCGG GTTTAAGTACAGGTTCGGATTTGTACACGTACTTAAACAGGTTTGTTCAA TTATCTGTAACTTTAGTCATACAAGTAACCACCTTTTTGTTTTAGTGTCA AATTGTCATTTTTGAATGAGGATGTACATATTCTGATCTCAAAATTAAAG TATTTAGCTTTCTAACAAGTACAGGACTATCAAAATTGTTGGTCCTGACA CAGTATTTATCTATCTTTAGCCTTTAAGATGGTGTCTACTATAGTTTTAG TTTTGTTCAGGTACAGGTTTATGTACAGATCAAGTTGATTTTTAGGTTTG GACCTGTACCAGACCAAAACAAATTAAAGTACAAACTAGTCCCAACAGAT GTCTTGAATCAAAGATTATTTCTAAGACAATGATGATGATATGGTTTATT ATTCAAATTCAAACTTTACACCATGAACATATACAGTCTCCCAGCCAACA AGTATATATCATACATCATCATCCTGTGCTAGAACAAAAATCTGAATGCA TCTAGTAAATCTTATATACTTAATATTTTAGAGCAATGAGGTAGGAGGGT CCTATCACATGGAGAAAGAGGGACTGGTGCGGTCACTGCACCTACTCCAG GACACATGGAACTTAGATGTTGGCACGTTGGTGACTGACAGACACTCTGG GATTATCAAGTGGCTCCGTGACCATCAACCGGACATCATACATCTATTTG ACATCTGGCATGTTGCTAAAAGTAAGTGAAACTTGCAAAAGGATATTTAG TTGTTCTTTGCTCATTTGGTGATACTAATATCCATAGTTTTAGATTATAT GGGGATACAAATGCCAATGGTAGGTTGAAATCATTCAATTTGTAATGATT GATTTGTCCATGCTTGTATATCCAGATATCAAGAAAAAGCTACAAGGCCT GAGCCGAACAACAGAATGCCAGGCATTGAGACCATGGGTTTCAAGTATCA TTAACCACTTGTATTGGTCTGTCGTGTCCACACCTCATGGGGAAGGAGAG CTCATCACAGACAAGTGGACGTCTGTTGTACAACACATCCACAACCGACA CACAGGGTTTCCCGGGCAGTTTCCGTCATGTATCCATGAACCCCTTGAGG GAAGGGAGCTTAGGAAGCCCTGGCTACCATCGCGTAAGTATGAAAAACTT TTCATGACATCATTAGTGAAATTCCTTGTAATTTCAAAGCAGTACATCGT ATATTCTATTGAGAAAGAGCTAATGTGTTGACACCTTTTTTTACATGTTT TCCAGATACAAAAGTGTCCATTGAAGTGGAGAAAGTGGTGTGCAGGAAGA AATTGTGTGGAGACATCAAACGACTGTCACCTGTACATCAGACATCATCT TTGGAGGCATTCCACAGCCTAATCAACCATTTTGCTCCAAAGATGTATCA TTTCTGCTATGAGGGAATGGAGTGCAGGTAATGAAAATAGAATACTACTG TAAAAGATGCTTTTAGAATATAGCGTTTATGCTCCCATACAAGAATTGTA ATCTTGTTCATGCTCACTTTTTTATATGATTGTGTTTGTGTATGTAGAGT GATTACCCCATTTCTGATCCCTGTTTAGAGTGATTCTTGCTGCCATGCAC TGGAACGAAAATGGATACAGGGCACAGCACACCACTGGAGACGGTAAAGC GACCTACAGCCTGCACTATCCGAAGCACAAGAAGGGAGGGCACGTTGTGC GCAAAGTCCTGGCGAATGCATCTTTTGGTACGTCCCTGTATTTTTATAAC TGGTATCACCGCCATTTTGCATAATACTTATCTTTGTAGGTTATTGTATA CAATGTACATTGTAAAAGTAAAGCTATTGCAGTGTAGTTGTTAGGGTCTG GGATTGGATCCAGACTTACTAGTAATTCATTCACTGCACCTATAAATGTG ATTTGTAATTTCTCTTTCCCCAGACTCACAGTCATCAATGTTTCCAGATG ATTCCTTGTTGTATTTGATTGGATTTATATAAAACTTCTTGATGTTTTCT GCCATTGATTTGTCTCATCCCAATAAGATTGTATTTTGCACTTTGTTACT GATATGCAGATTGAGCCAAGACATTAAATGGGGTAATCACTCTACATAAT GCATTAGATCGTGTATTCACTCTACATAATACATATCAAAATTTGAATAA TACTTTTTCACTAAACATATGTTGTCAATATTTTCTAAGCAGGATAAAAC TTTTGAAAATTCATTTCTTATTCAATGTATATTTCTATCAGGATATGTCA AAAGGTTGCTCAACATGGTGGAGAAGATCTGCAGTGGCCAGTCGTACGAT GGGGATGACATGGAGGTTCCAGACCCAGCCCGCATCCCAGAGCCCCTCAG TGCTTCCTTCCATCATCCGAACATGGAGGCGGCGATTCAGGCCCATGCTA CAAGACTGCATGTTTGA

Coding sequence (CDS) from alignment at Sc0000020:1628022..1630738+

>Blg03286.0 ID=Blg03286.0|Name=Blg03286.0|organism=Branchiostoma lanceolatum|type=CDS|length=1191bp|location=Sequence derived from alignment at Sc0000020:1628022..1630738+ (Branchiostoma lanceolatum)
ATGGGTGTCGCCCTAATGTCGATCAGATCCTTTTTCAGACACCAGGAGCG
GGTATTGTTTAAAGCTGTTTATCAACTGTGGGCGGAGCGCCAGGTGTGGG
ATCTCAGCCTCCTCCAGGCAGAGAGAGAGCCTATCATCTGTGGTGGTGAT
GGACGTGCGGACACACCAGGGCATTCTGCCAAATATGGCACCTATACCAT
GATGGAGCTCAGGAAGAATGTTGTGATTGATGTGCAACTTGTGCAGAGCA
ATGAGGTAGGAGGGTCCTATCACATGGAGAAAGAGGGACTGGTGCGGTCA
CTGCACCTACTCCAGGACACATGGAACTTAGATGTTGGCACGTTGGTGAC
TGACAGACACTCTGGGATTATCAAGTGGCTCCGTGACCATCAACCGGACA
TCATACATCTATTTGACATCTGGCATGTTGCTAAAAATATCAAGAAAAAG
CTACAAGGCCTGAGCCGAACAACAGAATGCCAGGCATTGAGACCATGGGT
TTCAAGTATCATTAACCACTTGTATTGGTCTGTCGTGTCCACACCTCATG
GGGAAGGAGAGCTCATCACAGACAAGTGGACGTCTGTTGTACAACACATC
CACAACCGACACACAGGGTTTCCCGGGCAGTTTCCGTCATGTATCCATGA
ACCCCTTGAGGGAAGGGAGCTTAGGAAGCCCTGGCTACCATCGCATACAA
AAGTGTCCATTGAAGTGGAGAAAGTGGTGTGCAGGAAGAAATTGTGTGGA
GACATCAAACGACTGTCACCTGTACATCAGACATCATCTTTGGAGGCATT
CCACAGCCTAATCAACCATTTTGCTCCAAAGATGTATCATTTCTGCTATG
AGGGAATGGAGTGCAGAGTGATTCTTGCTGCCATGCACTGGAACGAAAAT
GGATACAGGGCACAGCACACCACTGGAGACGGTAAAGCGACCTACAGCCT
GCACTATCCGAAGCACAAGAAGGGAGGGCACGTTGTGCGCAAAGTCCTGG
CGAATGCATCTTTTGGATATGTCAAAAGGTTGCTCAACATGGTGGAGAAG
ATCTGCAGTGGCCAGTCGTACGATGGGGATGACATGGAGGTTCCAGACCC
AGCCCGCATCCCAGAGCCCCTCAGTGCTTCCTTCCATCATCCGAACATGG
AGGCGGCGATTCAGGCCCATGCTACAAGACTGCATGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03286.0Blg03286.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03286.0-exon-Sc0000020-1570713199:1628022..1628267Blg03286.0-exon-Sc0000020-1570713199:1628022..1628267Branchiostoma lanceolatumexon
Blg03286.0-exon-Sc0000020-1570713199:1628853..1629042Blg03286.0-exon-Sc0000020-1570713199:1628853..1629042Branchiostoma lanceolatumexon
Blg03286.0-exon-Sc0000020-1570713199:1629197..1629454Blg03286.0-exon-Sc0000020-1570713199:1629197..1629454Branchiostoma lanceolatumexon
Blg03286.0-exon-Sc0000020-1570713199:1629577..1629748Blg03286.0-exon-Sc0000020-1570713199:1629577..1629748Branchiostoma lanceolatumexon
Blg03286.0-exon-Sc0000020-1570713199:1629900..1630048Blg03286.0-exon-Sc0000020-1570713199:1629900..1630048Branchiostoma lanceolatumexon
Blg03286.0-exon-Sc0000020-1570713199:1630563..1630738Blg03286.0-exon-Sc0000020-1570713199:1630563..1630738Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:1628022..1630738 +
Properties
Property NameValue
GeneIDBlg03286