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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:3034885..3042997- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03284.2 ID=Blg03284.2|Name=Blg03284.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8113bp|location=Sequence derived from alignment at Sc0000020:3034885..3042997- (Branchiostoma lanceolatum)
GATCAGGTGATACTGGCCGGATCACCAGTCATAGTTCCAACGTGGCCAAA
CCGNTCATAGTTCCAACGTGGCCGAACCGAGACGTTTTCACCAAAGGTAG
CCCCAATTTTACAATTTCTGTACAAATTTCTGCGTAGAATTGTGGCTTAG
TTTATTCTTAATGATCTGGTAAGGTTTTGGAGNTCTTAATGATCTGGTAA
GTTTTTGGAGTGATGCGTTGAGTTTAGAGCGAGATTTTCTTTCACAACAA
CATCGTTTTCAAACACACCCTTCCCCTAATACTTTCGGATTCTGAAAGAT
GACGTATCATTTACACGTAAAAATATCAAAATATAGATGTAACGTTAACT
AGTTACCATATTAATTACCTTGTTTGAAATTTTAAAGGTACATCCAAGGC
ATGTTTGAGCATGTATCAACAACACGTCTTACCGATTTTGACGATTTGGT
AGTCGTTTTATATTTGGCAACATAATTTAGTAGCATAATTTTTTAGACAT
ATGGACATTATTTCACGACTTTGAAATATAAATTTATGAAGGGGGGCATC
TATGTTATGTATGATTTTGTATCTTTGTACATTCACAGTAACCACCTAGA
GGATATTATAAAATTATCGCCATAAGTAACCCTAGGACCTCAGTCAGTAT
GTTGATCTAGGCTTGAACAAACAAATCTGTTTAATGTGGCTAATTTTGGA
AGCCATCAGCAAGGAAACTCAAGACATCATAGGTTTTCATCACTTTCAAA
ACATTGAAAAACAACTTCTTAGACGGCAGAACACATAAAATTGGCCTTAG
ATGATTATTTCAGTGTAATCTGGGCCTATTTTTGTTTTATTTGAGAAAAC
GAGAAAATAGCAATTCTCTCAATAATTAGTAATTACTCAAAGTCAACTGA
CTGAAAGAGGTTACAGAGACATGTGACTGAACAAGTCTAGAAGGTTTCAA
ATGATTTATATCAGGTCTAGACAAAGTAAGGTTTTAAAGAGTTTTTTTCT
GCCTTCTTTGTCTTCGTACAGACCACAAGATGGGAGACATGACAACTGCA
GACTCACTGAAGCCTCAGCCCAACATCATTTCCAGGGCCTCTACAAGACT
GGGACAGGTCTGTCAATATCAACTATGATTCTGAATCAGGATTTTATATT
CTATATTATAAACTGTAACATGTATGTGGATTACATTGGTGGCATCGTAT
GTCAGGGCTGTCACCAGGACCCATCCCTCTGTCCCCGGATGGAAATTTGC
CAGTTGGGACGGACAGAAATTTTAACCAATACGTCCCAAAATCTGACCTT
CATGACATGAAATTGATGAAACTGTATCTTTGTAAGCTTAAAGTTATGAA
TCTAAATTCTAAGAACGGTCGGAACTTTAAAACATGGGCTCCCAAAAAAT
GAGTGGGACAGAAAAATTGAAGACAGCCTTGTGAGTCGCTGTGAGGTATG
TGCTAGTAGAGACAGCGTATGTCTGATATGTCCATGTTTCAGTCTAGAAT
ATAGCCCACTCGAAAAGTTACTAGGGGAGACTAAAGGGATACAATAAATG
GCAGTAATGCATGTAGCCCTATGGGGAAGTTGTTAAGAAAGAAGGTGTTA
TTATCTCAGGAATCAAAACATCAGACTACAATAACTTACCCTCAAATACT
TACCAGTTATGTCAACTGTCATCAGATTCATCCCTGACAAATTCTATACG
GCTATTCTCCAGATAAACCCCCCTAATCAGAGCCCTTAAAGGGAATAGGT
CCTACAGGCTTCAAACACCCAGTTGAAGACCATCCCACTATATCAGGGGG
GTGCCAAACCCCACAAGGTAGAGAGAGACCATTTATTTCAACTAATTCAG
CAAATACAGAGTCTATCCTACCACAGCCAATCCTATATTGCCCAGATTTC
ACAAAAAATCCCACCAAAAAAGAATTTTCAATGGTTTAAACCATGTTTTT
TACTTGGGGTCTCTCATCGTGGGGTCTGGGCGCAGGCGCAATCCCTTTAG
TCTCCCCTATTACTAGTCACCAGGGATCATGGGGATCGGCATAGGATTGG
TGACTTAGACTAGTTACAGCAGAAATGTTCTGACACCTAGCTATCCTGCC
ACACTTTCTAGATAAAGAGTTTTTCGTTTGTGAATATTAGTCATCCAGGA
AATTAAAGAATAAAATTTTGATTTTAACATCTTGGCAGTTACCTGTTTTG
TTTTAGTTAAGTTAGAAAACAGATATGTAACATTATGTTGCTATGTTCCA
TAAGTCTTAGGTTAACATTTATTTTCCATCACTGATAAAAGATGTCGGAC
GGACATCTGATATTTTCATATTGTAATCCAGTGGTATAGATTGAATTAAA
GTTTTATTCAATGTTTGCCTAACTATGCTTTGTATTTCAATTCATGCTCA
ACAAAAGAGTGCTTTGAATGTCTTGGAACAAAAGATGACTTAGGATATTT
GGAGTTTCTTATTACACAACCAGGTAATCTCACCTGCTGACGTTTCGGTG
TCTGTCAGACACCTTCTTCAGAGCTTCTGACTGGAGTACTGCTTCTCACC
GCTATAAGTAGCCGATGTAGGTGGCGCTTTTGCGGCGAGAACGTAATCCC
AAATATGGCTGAGCTTGTATCCGTCAGCAGGTGAGATTACCTGGTTGTGT
AATAAGAAACTCCAAATATCCTATGTTCTACCAACCTGATGAAATTATTT
TCGGAAGGAAAAGATGACTTGTTTCTCTCTATCACAGATCTACCAGGCAT
GGCTGGATAAGTCCACTCCACACACTGTGGCCAGATGGATCTTCACACTT
GTTGTCTTCATCTCATATGCCATCAGAGTCTATCTTCTAAAGGTACAACA
TGTAGGGTCTATTACTGTAGATGCAGAAATGTTCGCGGTGGTTTTATGTT
CGCGGTGAACTCTTTACCTCAAACTTAAAACCACCACAAAAAGCAGGTCC
ATTGTGTGACTGTAGCACTTCTATCGTATCAAATGCAAACACAAAACCAC
CGCAAACACTCTCAGCATATTCTTCAACGCGAAATTAAATCCCAGTGAAG
ATTTCTGCATTTACATTTACAGTAATAGCTGGTATTCTGCAGTGTATTTG
TATTTATTAGCAATGAAACAAGTCATTACACTGGGTCAGCCAAGGCAGCT
CTTGCTGGTAACGACTGACCCACAGAAATGCTGACGAACATACAACTTAA
CCTACAAGTGATAGAATACAATAGTCATTGATATACCAGAACTCTCCACA
AGCAGAAACAGGTGGCGGGGCATTCAGAATTGTGTATATAATGGAAGAAC
CTCATCTATATTCCGTAAACATACAAGGCTTCTGAATCATAATGATATTG
TTACATACAAGAAGACTATGATGTCTTGGAATGTCTTTAAAACAAAATGT
TCACATGACTCTGCTTATACATGTAATCAAATCTGTAAAAGAACATAGGG
ATTACTGGTAGTGTTTTTTCCACAGCAAATGTGTGTGTACCACATACAGG
TTATAGTATTTGTACCTTTGATGACAGACTAATCATTGAGTATTACCTCT
ACAGGGTTGGTACATTGTGACATATGCCCTGGGGATCTACTATCTGAACC
TGTTCATTGCCTTCCTGTCACCTAAAGTGGACCCTTCCATGGAAGACAAC
GGTCAGGGGACATTCTCTTGTCATTTAGTAACAAATGTTGGTCTCTAGAT
TACACTTACAGTTGACTCAATGATAGAGCTACTATAATACTATAATAACA
GTGTCGAAGTAAGCAAGCAAGGGCACTGAATATGTTTTTAAAAGTGGTAA
ACCAACATGTTTCTTTTAACCCTTGGAAACAGTATGAACTTAGTACTGCA
ACTGTGTTTGTGTAGTAAAACACACCCTGCCTTACTGCCCTTAGGCTAAA
AATCTGTACTAATCTTATACTTGCACAGCATATCACCCTCATCATACCGG
TATCACCCTAAACTGACCAAATAGTCCAAAATGTTGTGTTTTTACAGAGG
ATGGACCGTCGCTGCCTACCCGATCCAGCGAGGAGTTTAGACCCTTCATC
AGAAGGTTACCTGAGTTCAAGTTCTGGTAAGGGTGACATTAAGTTTGAAG
ACTTAGATCAAGTTAGATGTAGATGTCAAAAGTAGAGTTTATAATCTTGT
ACTTCTAAAGCAATAGCATATACATGTATTGTGTCTATCGGGAAATGTTG
TCATACATGTATGACCAAACATAATGCTGGTTAACTTTCTCAAATCACCT
GTTCTCCTTATGATGTTATTTTCCCATCTGCAATAGTCCAGTCTTGAACC
ATTTGAAGTCACTTCCACCAGGCCCTCCTACGAGCTAATGGATCGTAGAA
TTCATCAGAAAAAGGAATAATTAGCCAGTAGAGTCAGTCCATGGTGAAGA
TCACATTTCGCCCGCGTAGGAGCCTGCAAATAAAACCCTGGCAAATATTC
TCTCTATACCCGGCGTAGTTAGTCTTGTAGAGAAGTACATTTGAAAAGTA
ACTACCAGTTGAAGAGATATACATGTATACAGAACTATTTTAATAATACT
TATTAAGTGCTTTTCAGCAACATGTATTTTCTGTGTTTTTGTAGGTACTC
AGGTACAAAAGCTATCGTTATCGCGATGACGTGCACGTTCTTTGAGGCGT
TCAACGTGCCGGTGTTCTGGCCAATCCTGGTGATGTACTTCATCATCCTC
TTCTGCATCACCATGAAGAGACAAATCAAGGTGAGGTGCCCATCTCAAAA
CTTCATCACTACTTCTCAACAAAATTTGATCCGTCTCAAAACATCATCAG
TACTTCTCCACAAAGTTTGATCTGTCTCAAAACTTCATCAGTACTTCTCA
ACAAAGTTTGATCCGTCTCAAAACGTCATCAGTACTTTTCAGCAAAATTT
GATCTGTCTCAAAACTTCATCAGTACTTCTCAACAAAGTCTGATCCGTCT
CAAAACGTCATTAGTACTTTTCAACAAAATTTGATCCATCTCAAAACTTC
ATCAGTACCTCTGAACAAAGTTTGATCAGTCTATAATGATCTGTTGAATT
TTAAGAGATTCAGCAGAAGTTTTAATACTGTACAAGATTAGCCTGGTAAC
TTTTTGTCCAAAGCTGCTGAGACTCTGAGCATTTTTTTTGCACATTATGA
TTTTTCTAACACTTTGCATAGAGAAAGAAGAGACTGGGCAATAGGTTTGG
ATACCAGGCTGACAGTGGAAAAAGACAAATGGATTTTCAGCAAATTATTC
TGTAACACCTGTTTGTTGACTTCTTTATGAAGAACAAGTTACTATGTGTT
TCACTTATTGACAGACTAACATTGCATCTATATTCAGTTCACAAAAAAAG
CATCATCCTTGATATTTGATCCCATAATTTGCATATACATGTATATTAGA
TATTTTATAACTTTGAAACATGCTCAACCTGTACACAAGTATGTCTGTAG
TTTCTGTAAAAATTTTGAACTGAACACAAAAATTGGACTTACCCAAATTT
TTGACTGTACAGCTTTGTTAAGCGGTGTATTGCTCACTCCTTGACAAAGA
CTGTAGTTGTACTAAAATTTGAGCAAGTGCGATTTTTGTGTTGGAAAATA
AAGTTCAAACTTATCCAAAATGACTTCTACCAACACAGATGAACTTTCAA
GCTGTGTCTGTATTTTGTTCTACTGTAGCCTTGATCCCAACAATTGAATG
ATAAAAGTTTCCCTACGTTTGTTTCAGCACATGGTCAAGTACAGGTACCT
CCCCTTCACCCACGGCAAGACCAAGTACAAGGGAAAGGACGACTCTGGAA
AGGTCTTCTCTAGTTAGGTATACTTAAGAGAGTATCTTTCTTTCTGTCGT
AACAAGCTCTAGGCACTAATCTCTTAGTACTTTACGTGTAATTGTTCATT
ACATGAAATCTCATTTACATGCCATAAACATGTCATAACTAGATACTAAC
CCATATCATCCTGCCATGGATAAAATACATGTTTTTTTATTAGTTTTGAT
ATGAAAAAAGGTGATACAACAAAAATTGTATACTGAAGTGTTGTATGTAA
AGATTTGAAAAGTATGACAGAAATCGGTAGGACATATTTCGCTTTATAAG
TCTTTTGTTAAAACTACACAAAACTTTGTTGTCAACATACATGTTTAGGT
TTGTAATTAGCCTCATTAATTTCTCCTATAGAAAGTTGGCAAGTTAGATA
TGTAATGAAATGAAAAACATTTAATATCATCTCCTATGCTTTTTTGTTCA
CATTGTATCTTTGCTGTGTTTCGAAAACTGACAAGCTGATTTGTTTCTTT
GATATTTTCAGATAACTGATGTCACAGGGGAAGTTCAAAGGATTTGAAGA
GGAAAACACTTCATATATAACCTGTAGAAACATCTGATTGTTTTTTCTTA
TGGTACAGTATATCTTTTCTGTGCCCATTTAAAAAGTTACTGTGTTGTCA
CCCAAGGAAAGCTATTATAAGCTGCAGGTAGAATTGCCACAAAAACGTGG
ATGATATTGAATTGAAATGTAAGTATGAAAATCTCAGACTCATGCCAAAA
TTACCTATTTGAACAAAGCCTCTCTGAGTTTTGTTTGTACATGTAAATGG
TTTGTCACTGAAAAACGTCTACATTTTTGCCAATAGGTTTCCTTCCCAAG
CACACACACACACACAGACACACACAGACGAGTAAAACACTTACGTTAGG
ACAGGATTTTGTATTCACTATAGACCATTAACTGTTGTGTGATAACGAAT
GTTTACACAGTTTTAAATTTATTCAGAAATGGAGTAATTGAATTGGGTTG
CTTACAGGAAATTTGCATGTGTGACTACTGGTATGCCCCTTGTTAATTAC
TAATACTGTTCATGTGTATAATTATGTATGATAAGTCACATTGTACACTG
AGACAGTCTTTCTCATTGAAATGTTGTAAATAGTTGGGGTGTTGGTCATT
TATATACTACATGTGTATAAATATAAATCAGAGATTTGACTTGTATTGTA
GTTGACAAAGTGTAAGAAAGTCTATGAGGAAGTATAGAGATGTTGATCCA
CAGTTTAAGGCTTAATGGTTTGAATTTTTAATGTCATTGCCAATTTATTT
CTTTGGTCTGTAAACCATTATCAATTTTAAAGATAGAGGGCAGCTATCTA
AAAGAAAAAGGATAAAATGTACAGTTTGGAATTGCTTATTTGGAAGTATA
CTTATGAATTTTGAAACATGCTTTGAAAAAAGGAAGTTTTCTTTAAAGTT
GTCTTGAAATTATCAGCGAGTCAGGTTTTAACCCCATGATTTTGGCACAA
CAATGGGAAATGCATTACTGTAATTCTCGTTACTTTCACTGTAACTTTGT
TCACTGTTTTCACAGTCACCTCAGTACCGTGAACAAACCTATTGTTATTA
TTTATGATTTCTTCACACATCTGTTCTGTAAATCACTTGCCGCCACTGTG
AAGTTAAAGTTCAGTGAAAATGTCAATTTTCCTTACACGGTGAAATTTTG
CTACTGTGAAGATTAAGTGAATTACAGTATGTATTCTTCTTCCATGAACC
AAGAAATAAATTGGCATTCATAAATGTGTTGATATTTCAATGAGAGCTGC
TGAAATACAGTTGGAAAAACACAGTTGGAAAGCAGTAGTGTAAGTGAAAA
TTACAAGAGAATAAAGAATCTTATAAGTGTATTTATGATGTTTGAAATGC
AGTACCAATAAAACAATAGAGGATGTAAATGGATAATGTCTTTGTGTCTG
AAATGTTTTCTATTTATTTAATGTTGCAAACTCAAGTAATGGTGATTTGC
CTCAAGAAACATATAAGTTGAGGATTAGTTGATTGCAACAAGAAGAATAT
TGTAGACTACTGGTAGGTAGCGTCCTTTGCAGAACTGTGTAGCTGGCAGT
TTTCCTTTGGCTGATGTGCACTCTTCTGATAGCTTACATGTTTCAATGAT
TGGTATGCCAACCCAGAAGATAAAATTTCAACATGCAAGCAAAACAGAGA
TGACCATACCACATTCCACCAGTTCAGTTACATTTACACATATATAATGT
ACATTCCATTTTTTGAAAATTGAGGAAAATGTAGGGTTGCATATTTCTGA
TTCTCAAGATGAC Coding sequence (CDS) from alignment at Sc0000020:3034885..3042997- >Blg03284.2 ID=Blg03284.2|Name=Blg03284.2|organism=Branchiostoma lanceolatum|type=CDS|length=585bp|location=Sequence derived from alignment at Sc0000020:3034885..3042997- (Branchiostoma lanceolatum)
ATGGGAGACATGACAACTGCAGACTCACTGAAGCCTCAGCCCAACATCAT
TTCCAGGGCCTCTACAAGACTGGGACAGATCTACCAGGCATGGCTGGATA
AGTCCACTCCACACACTGTGGCCAGATGGATCTTCACACTTGTTGTCTTC
ATCTCATATGCCATCAGAGTCTATCTTCTAAAGGGTTGGTACATTGTGAC
ATATGCCCTGGGGATCTACTATCTGAACCTGTTCATTGCCTTCCTGTCAC
CTAAAGTGGACCCTTCCATGGAAGACAACGAGGATGGACCGTCGCTGCCT
ACCCGATCCAGCGAGGAGTTTAGACCCTTCATCAGAAGGTTACCTGAGTT
CAAGTTCTGGTACTCAGGTACAAAAGCTATCGTTATCGCGATGACGTGCA
CGTTCTTTGAGGCGTTCAACGTGCCGGTGTTCTGGCCAATCCTGGTGATG
TACTTCATCATCCTCTTCTGCATCACCATGAAGAGACAAATCAAGCACAT
GGTCAAGTACAGGTACCTCCCCTTCACCCACGGCAAGACCAAGTACAAGG
GAAAGGACGACTCTGGAAAGGTCTTCTCTAGTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03284.2-exon-Sc0000020-1570713199:3042965..3042997 | Blg03284.2-exon-Sc0000020-1570713199:3042965..3042997 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3042902..3042937 | Blg03284.2-exon-Sc0000020-1570713199:3042902..3042937 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3041891..3041976 | Blg03284.2-exon-Sc0000020-1570713199:3041891..3041976 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3040156..3040260 | Blg03284.2-exon-Sc0000020-1570713199:3040156..3040260 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3039347..3039443 | Blg03284.2-exon-Sc0000020-1570713199:3039347..3039443 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3038922..3039000 | Blg03284.2-exon-Sc0000020-1570713199:3038922..3039000 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3038268..3038403 | Blg03284.2-exon-Sc0000020-1570713199:3038268..3038403 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3037181..3037270 | Blg03284.2-exon-Sc0000020-1570713199:3037181..3037270 | Branchiostoma lanceolatum | exon |
| Blg03284.2-exon-Sc0000020-1570713199:3034885..3036686 | Blg03284.2-exon-Sc0000020-1570713199:3034885..3036686 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:3034885..3042997 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03284 |
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