Blg03279.0 (mRNA) - B. lanceolatum

Overview
NameBlg03279.0
Unique NameBlg03279.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:1372007..1373749+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03279.0 ID=Blg03279.0|Name=Blg03279.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1743bp|location=Sequence derived from alignment at Sc0000020:1372007..1373749+ (Branchiostoma lanceolatum)
ATGCTGTTCACAAGTACAAACAACAAAATTGTAGAGAAATATTCTTCGTT ATAGCTTGCAAATGCTGTCTTCCTGCCTGGTATTTTTTGGGGGAGTCATG CGGTAGTCAAATGTATTGCAGCCTGTTTACTCTGAAATATCAACAACAGC AATTATTCCCTAACTTATTTTTTCCCAATTAGAAAAGTCAAATATATTTG CTAATAATGGATATTTAGATTGACATTTCAAAACCCTACTCTCAAATTCT GATGACTTTAAAAAAAAACAACTCTCTATCCGTACTACTTTTCTGAGTTC CTTATAGATACCTGCTTGGCAAGATGTCGGGGGAGATTCACTAACTCACT GTTTGGGGGCAGATTCACCAACTCACTGAGGAGAGATTCACGAAGATTAG CAAGGCCTCTCCTTGGGGAAAATAGTGAAGCCCCTCGTGGGGAAGTTCCA CTATTTTCCCATAGAGAAGCCAAGGCCATCTTCTGTTTTAGAACATGGCC ACTTTCCAGAAGATTGTCTTTTTACCAATATGGATCAAGGACATTGTTTT CAGCATGTTATATTGAAGCAAAATGACCTGTAAACAAGCTTTGTCCATGT CCTATCTGTTATAGAACCTGGCCCGACTACCATGCAGTTTTTATCATTCA TCCCATGGTCTCAAAATATTTAAAAGATATTATATGCAGATTTTAAAACT GGGAGTGGGACACATGTGGCGCAAGCGGTAACGCATGTGGAACCTAGCAT GTGGAAAGCTGTGGATTCAATACTACTATGAATCATTCTAGTTAATTATG GTTGTTCATGATTGTAGATAAGTTTCATTTTTTTTGCACCATTTTTCAGG ATCATCCTCTGGGTTAGGGTTAACAGGATCATGAGGTGTCCACAAGGTTA TCTTAGGATTTGACCCTAGCCTCCTCCTTAATTCATGACCTCACTGTAGG CTGTTGTAAGTCCATAAGTGTTTCTTCTGATCTTTACAGAAGTGGTGTTA GCTGTTATCATCATCATGGCAACTAGTGGGATCAGCTCTGATGACGCGGC AAGCAGAAGGGAAGAAGAGTTTGGTGGCAGAATTACGACTGCAAAGCGCT ACAGGTGTGAGGAGTGTAGCAAGCAGTTCAGTCAGCTCAGTCATCTGAAG AAACATATGAGGACTCATACAGGTGAGAAACCTTACAAGTGTGAGCAGTG CAGCAAGCAGTTCAGTAGGCTGGGTGATCTGAAGAGACACATGCGGACTC ACACGGGAGAAACCCTACAGATGTGAGGAGTGCAGCAAGCAGTTCAGTCA TCTGGGTGATCTGAAGAGACACATGCAGACTCACACAGGGGAGAAACCCT ACAGATGTGAGGAGTGCAGCAAGCAGTTCAGTCGGCTGGGTGATCTGAAG AGACACATGCAGACTCACACAGGGGAGAAACCCTACAGNGCAGACTCACA CAGGGGAGAAACTCTACAGGTGTGAGGTGTGTAGCAAGCAGTTCAATCAT CTGGGTCATCTGAAGACACACATGCGAACTCACACAGGGGAGAAACCTTA CAGGTGTGAGGAATGCAGCAAGCAGTTCAGTCAGCTGGCTACCCTGAAGA TACACATGCGGACTCACACAGGTGAGAAACCCTTTAGGTGTGAGGAGTGC AGCAAGCACTTCAGTCATCTGGGTCATCTGAAGAGACACATGCGGACTCA CAAAGGTGAGAAACTCTACGGGTGTGAGGACTGCAGCAAGTAG

Coding sequence (CDS) from alignment at Sc0000020:1372007..1373749+

>Blg03279.0 ID=Blg03279.0|Name=Blg03279.0|organism=Branchiostoma lanceolatum|type=CDS|length=402bp|location=Sequence derived from alignment at Sc0000020:1372007..1373749+ (Branchiostoma lanceolatum)
ATGCTGTTCACAAAAGTGGTGTTAGCTGTTATCATCATCATGGCAACTAG
TGGGATCAGCTCTGATGACGCGGCAAGCAGAAGGGAAGAAGAGTTTGGTG
GCAGAATTACGACTGCAAAGCGCTACAGGTGTGAGGAGTGTAGCAAGCAG
TTCAGTCAGCTCAGTCATCTGAAGAAACATATGAGGACTCATACAGGGGA
GAAACCTTACAGGTGTGAGGAATGCAGCAAGCAGTTCAGTCAGCTGGCTA
CCCTGAAGATACACATGCGGACTCACACAGGTGAGAAACCCTTTAGGTGT
GAGGAGTGCAGCAAGCACTTCAGTCATCTGGGTCATCTGAAGAGACACAT
GCGGACTCACAAAGGTGAGAAACTCTACGGGTGTGAGGACTGCAGCAAGT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03279.0Blg03279.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03279.0-exon-Sc0000020-1570713199:1372007..1372019Blg03279.0-exon-Sc0000020-1570713199:1372007..1372019Branchiostoma lanceolatumexon
Blg03279.0-exon-Sc0000020-1570713199:1372996..1373178Blg03279.0-exon-Sc0000020-1570713199:1372996..1373178Branchiostoma lanceolatumexon
Blg03279.0-exon-Sc0000020-1570713199:1373544..1373749Blg03279.0-exon-Sc0000020-1570713199:1373544..1373749Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:1372007..1373749 +
Properties
Property NameValue
GeneIDBlg03279