Blg03275.2 (mRNA) - B. lanceolatum

Overview
NameBlg03275.2
Unique NameBlg03275.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:3193153..3202189-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03275.2 ID=Blg03275.2|Name=Blg03275.2|organism=Branchiostoma lanceolatum|type=mRNA|length=9037bp|location=Sequence derived from alignment at Sc0000020:3193153..3202189- (Branchiostoma lanceolatum)
AATTAGAAGCGTCTATTAAAATCTGATGGCTCTAAAAAGACAATAAAATG TTTTAGGACCTAAATTCCTTGTCTATATTTACGATTTTGTGAATTTTTAT ATAAAGAGTGTTATTTTGATGACGTCAAACGAGTGTGACCTTTCACCCCA CTCTCCCAACATGGCCGCCCAGACAGAAGTGAAGAAGACGATGCCCAAGT ACGTCAAGTTCCTCTTTGGAGGACTTGCGGGGTACGTAGATTACTTCTTA TCCCACAAATCTTTGACAGAAGTATTTTCCATTTGTCTGTGCGAGTTTGA TGCTCCCCAGAGCTTGTAAACGCAGGCATAATCGGGTAAGAGTGTGTCCT TGTCAGCCGGCGTTTGCAATTCTTGGTTCTGTCGCAAGGCTTATTGTAGG ACTGGGGGTTTTGTGGCCGTCTAGATTATCGCAGTTTTGTGCTACTAGTA GTTCTCGGAAGTAGTGTTTAGATTCTATTTTCTTGTTACAGTACAGATTC GGTCCCATGCCAGGATTTTAACATGAGGCGCAAAAGAAATATTTTCTTGT CACGCCCCCCTCTTTCGTTGTGCTTGCCTCTGAAACAGACGAGTTTTGCA TAATTTTTGGGACTAAGTGAGTGCAGGACTGGGTTCACGCCCTCTTGTCG TATGTCAGCAATGTCATGGTCTAGCAGGGGTCTTACCTGTGCATTATTCA AAATGGGCGTTGATTTCTAAAGATTCAACGTTTAAAAATGATAACTTTTG GAAATGTAGACTACTTTATTGAGCTTGAATATCAATAATTGCTTAGTTAG TAATTGAAGTTTCAACAATTCTTGCCTGTTGTCATGTAAAACCTCCTTGC TTTCTAGGGATTCCTTATGAATACAATACTTGCTTAGTTAGTAATTGAAG TTTCAACAATTCTTGCCTGTTGTCATGTAAAACCTCCTTGCTTTCTAGGG ATTCCTTATGAATACATTTTGTACAGTCCAAGCCATTTGATCTCCATTTA AAGTGTGTGCCCTAGGGCTATTAAAGTATTATGTATAAAGGAATGAAGGC CTGCTTCAAAACCTCCTTGGTTCTGCACACTGACAAGTAGCAGTGTTGAA AGAAAGTTTGAATGTGAAAAAAAAAGAAGAAGATGCAAAAGAGTGAGAAA GAATAGTGACAGTAGGAGAAAGAAAGTTCTATAATCAGTAGTAACTTGAT AAAAAAAATCTCTTACCCCTGTTCTAGCTGGCCAGTGACTCGTTGTGACC TTTGACATTTTGCATGATGCAACAGCTGTGTTGTATTGATCTGACAGCAT GATGTTCCTGTGTATCATACTTCTTATAAGAGTATATTTTTGTTTACTTT TGATTGCAAATACTAGTAGTATAAGAAAAGGAGGTCATGGTGTTTGACTA TATTTAAGTTTAACTTTTGCATTTGCATTGTAGCTGACCAGATTGGCATG CATGAATCAGTGCATGTTAAAGATTCTGGTACCCAGGTTACATTACAATA TACTAGCAGCTTACAAGCTCATTCAATGGACCAAGAGGTGCAAAATAGAT TCCTTGGAAATTATTTGACTGGCATCCTCTGCTCTCTCATTGGTCAAATA GATAATTGTCATTCTCTCATTGTATGAACTGCTAATTGTGCTGGTTAGTC AGGATTGATCTATTAACATCCAAGTCGACATAAAAATTGCTAACTTACCA TTAACCAAGTTGGCATGGATGCAGCTCAGGTAACGAAATATTTGCATAGA AATGTAGGAATGACTTGCAGTACTTGAAATTAATTTTTTTAAGTGCTTCA ACATTATTGTTCATGACTAACAATTTACTTTTCAATTCTAGCATGGGTGC AACTCTATTTGTTCAACCTCTGGATCTGGTGAAAAATAGAATGCAGCTAA GTGGTGAGTGTATTTACTCATGTATAACTTTTTGATTTACAAATGAAATT CTACCTTGTGATGCTTCAGAATACCCCGGTAATGTACAAGTGAATGTATT ATGAATTCTTATTTGATTGCGTATGTCAGTTAAAATGTGCATGTCCTGTA GGGTTGTGACTATTCAATTACTAGTACTACATGTCCCATTGATATTTTGA TTAGAGTTATAATACATCATAGAAGTACCATTAAATTTGTTTACATACTC TCTGTTTTGCAGTTTTGGTACCACATGGACTGAGTCCTGTTGTAAACACT TGTTGTTCTTGTTTACAGGTGAAGGGGGAGGAAAGAGNTGTTGTTAACAC TTGTTGTTCTTGTTTACAGGTGAAGGGGGAGGAAAGAGACAATATAAGAC CAGTTTTCATGCTGTGACAAGTATATTGAGATCTGAAGGCATAATTGGCA TGTATACAGGGTAAGTAGAACAGACATTTCTTGCTTTTAACTTTAACAAA TTTAATGATTAAAGATATACATTTAATTAAATAGGGGGATTAAGCTTCTT CTAGCAAGCTTTGTGCAATTAAATTTTGCTTACAGTTTCCATTTTCTGAT GATCCTTTTTCTGTGTAATCTTCATTAGGAAAAATTATTAGATGTTTACT TAGATAGCTTCAAGAAAGAGAAAGTCATAAATGACCAAAAGTCAGTTTTA TTACCTCAAATATCATACAGCACATTCATAGCGCATATGTTACTCTATTA GGACTGTCTACTGGACCCATCCCTCCATCCCGGGACAGAAATTTGATTGT TTGGCAGAAAAAATTTCACCCCATCTGTCCAAAAAATCAGAGCTTGAACA CATGAATTAATGTTAATGTATTTTTGTAGGCTTAAAATGACAGACTTAAC AGTGCAAAATTCACCACAAGGGCTCCCAAACAATGAGTGGGACAGAAAGC TGTAGAGAACCCTGTTTCTGACTTTATTTGGATCCACAATTAGCTTGACA TTGCTGTGAGCTATTCTTCTTTTGGTCCTTTACATGTAATACATCAATAC AAAATACTGTACTGTACTCAATTAAGGCTTTTCTCTCTCCAGGTTGTCTG CAGGGCTTCTACGACAGGCCTCCTACACCACTACTCGTCTGGGCATCTAT ACCATTCTGTTTGAGAAGTTTAGCAAGAATGGACAGCCTCCCAACTTCTT CATGAAAGCTGGCATAGGTATGTACATTTAGACATCTCGAGCTCATGAGG AAGAGAGGGTCACTGATGATTTGTGTGAGACATTGCAATAAGGTATTAGG AGGGATAACACATGCCACAGATTTCTAAGGTTATTTGCAATTTCTAAGGT TATTCGCAACCGTAGGTTGTCTCTGGCCGGCCATGTTATGCGCCACGAGA AAATGGCGGGTATGGTTCTCCTCTGGAAACCGAATGAAAGGAGTAGGCGT GGTTGCCTGCCGTTGACACTAAAGAAAGTAATCGAAGAGGATGTTGGCCT TGAAGATGAGGAACTTCGATCTGTCATGTGTGACAGGAACTTGTGGAAAC ACTTGTGTCACCTCTAAAAAGAGGATGAACTGAACTGAACTGATTAGGAG GGATTGTATTTGAAACGCCTAGAAGACAAAATACTTGCCTCAGACTAGAT GCAAGTAAAGACTAATTGTTTCTTGTCCCCAGGTATGACTGCAGGTGCAA TCGGGGCATTTGTAGGAACTCCTGCTGAGATCTCACTTATAAGGATGACA GCGGATGGAAGGTAAAGAAACTCTCACTGACTTGATGCATGTGCTATTGA TTTGTACACAACAGCAAAAGACAGTACTGTTCAAATGCTATCTCGAAAAT ACATTTTTCCTTCAAGCTTTTGTGCTTTTTGTTGCATGTGTATTACTTCC TGTTGCTTTTTAAATGTCCCCAAAAGCTGTACATTCTTTTCTCTTATATT TCTCAAATGTTTGAACATATTTTCCCCCTTTGTAGATTACCGGTAGCTGA AAGAAGGAACTACAGCAGTGTTTTTAATGCCTTGGCTCGGATAACAAGGG AAGAAGGCCTTTTTACATTATGGAGAGTAAGTACATGAACCCTTATTTAG TTCAGAATAAATTGTCAATTTGTCATGAAAACAATAAGGAAAATACAGGG AAAGTTGTAGGCCCACATTGTATAGCAAAAACTAAAGGCAGTAAACTTTA GCCTGCAGATATTTGTGCTGGTTAAAATGTTAAACCCGAAGGTTGTGATT AGCATTGTTACTGCAGTCGTTTTTGTGTTCATATTCATAACTACCTTCCC ACTTGCATACTAACCAATACAGAGCTGTTTTGTGTGTGAGCCATAGTATT GTTACAATCTAGTGTCTTGGACAGCACATATACCTTGGTGTTAAGCAGTT TTTGTTTGTGTTCCAGGGTTGTGGTCCGACAGTGTCCAGAGCTGTTGTGG TGAATGCAGCTCAACTGGCATCTTACTCTCAAGCCAAGCAGTTCCTCTTG GGCACAGGTTTGTGTCTTGGAATTTCGAAATGCCAATTTTTGACTAGCTA GACCTAAGTCCTTAAAACGAATTTATGAAGTACAATAGATTTCAAGAGAC TCGTTGCTACAGACAGATTTAGATATATCTTAGATGCAACATCTCTTACA CTGCAATATAGGTAAATATATAAAAGTCTGCTCTGTCATTAGAAAAAATA CTGAAACTCATGCTTAGCCTCACTGGATTGTAACATTATATCAAAGACTT ATGCTATAGCTAGCCCTTGTTGTTTTAATAATTAGGATGTTAGGAAGTTT TATTTTAGACCTCTAGTATTATGTACTATGTTGAATAGTTGTTCCCATAC ATTGTATCGTGTACAATTGTCATGCAATAAAATTCTTCTTTATGAGTTTC TTGATACAAAATGAAAAAGAAAAATTCATTCCTCACATAAAGTTGTTGTT TTTTTCCTCAGGCTGGTTTGGTGATAACATCCTGAGTCACTTTGTGGCCA GTATGATCAGTGGCCTGGTCACCACTGCTGCCTCCATGCCAGTGGACATT GCAAAAACCAGGTCAGTACTCAACCTGTCTGTAGCCATATCAGCGTTCCA AATACCCATGTGGCATCGTGTGGCGCAATCGGTAGGTTGTTTCGCCCAGA ACCGAGAGGTCCCGGGTTCGAAACCACCGGTATGCCCCGATGTTGTGCCC TTGGGAAAGGCACTTGACACGTATTTCCTCACTCCACCCCGGTGTGAATG GGTACCTGGCTTCGGTTGGTCGTATTGAGGTCACCTGCTGGCGCCGAATG GCAGCTGCCAGACCCTTGCGACAGTTACATAAAGTGCAAGTGTGCAAATA TGTATCATGTGTATTATTGTGTATTATGTGATTGTAAACCCTGCAGCAAT TCAGCATTGGCTGCCATTGCATGGGTAATTTCGGACCAATAGATTATTTA TTATTATTATTTTTATTATTATAACCTGTCTGTAGCCATATCAGCGTTCG AAAAACCCGTCTGCAATCTGCAAATTGCAGAAGGATTTTCAAGATTGCAG AAGAAAAATTAAGCAACCTGCAATTTTGCAGAATAAAAAAATCAGGCTCA GGATTCAATGGTTCTCAATTTAGGAGGTTATATAGACTTAGCAAACTAGC GGCGCTGTAGATAAACTAAAACCCACAGCACCGCGCAAGCTGGTGGCGTT TCAGTGCGTTCCGACTGCCTTGCACAGCCTCGCACCGACATGAGTCAAGT TTTTCTTTTTTTGGGGGGGAGGGGTCCGACAATTTCTGTGATAACTCCAG GGACGAATCATGTGAGAAAATTTCAAATTCGTGCATTTCCGTCTTAACCT CGCCAATCTCCGCGGTCACAATCTCGGAGTCGGCAAAAGCCCTAAAAATT TGTCTTCAACCCTCAAATCACTACCTGTAGTCTAAGTATTTTACTGTAGA CCCATGATACACACTAGAATTCTTGGTCACAAATTGTAGTTAACAAGTAT CCATTACAACAACCAAATCAAAGTCAAACAATGGAATAGGTCAATATAGC CAATTACAGTCAGTTTTGTACTCTTACCGTACATGTTTTACATATTAATT TCTATCAGAGATAACAAATTGTTGGATGCCCATGTACAGGATACAGAACA TGAAGGTCGGACCAGACGGAAAGGCGGAGTACCGTGGTGCGCTTGACGTG CTGTACAAGGTCATCAGACAGGAGGGGCTGTTCAGCCTCTGGAAGGGCTT CACGCCGTACTACTTCCGCCTGGGCCCGCACACCGTCATCACCTTCATCT TCTTGGAGCAGATGAACCGTATCTACAGAAAGGTCGTGCTGGGGGAGGAG GGGACGGGGAGTAGCCTCTAGGGGGAGGGGCTGGTTTTCTCGCAGATTTC TGCTGGGTGCTGTCTCGGTCAACGGGCTAGAGCCAACCGAGACTAGCCTG AGTACCAGCCTTTTTAGCTTCCGTCCACTACCTAAGCTTCGCTACCAGCC GGAAGCAGAGCTTGGGAAGACGGAAGCTAAAAACTAAAAAAGTCTGGTAC TAAAACGAGACAGCACCCAGCCTACTGTAAGACTTGGCTGTAGTAGTAGT ATTGGCATCTCTCAGCTCCTGGAACAAAATGATGTAAAAGGCTCTCCAAC ATAACACTTTGTACGGTTCAGTGCTATGAAGAGGTAGTATTCACCGATGG TATTGTTGAACAATACAGAAATCAATCATGAGAAAAAGGGGTTTCAATTA CTAATGTTAGGTACCATAGAAATAGAAATCATTAGTCCAGGAAAACAAGC CTCGACAAGCCTCGAACCTTGCCTCAAGCATACTATGATTTTTCAATCAT CCATTGTCACTTTAGGTGTATGAGCCAGGTAAATGTGATTCCAATGAAGC AAGTTTTGTTTTTGTTGGTGTTCGGATTTGCATGCTGGCTAAGACCTGAT TTGTTTGGATGCTTAAAAGTCTGTAATTGGAAACAGCTTGGAGTTGTGAG AAACTCTCAAATTCAGATATGCTGGTTGAAACAGTTTTTAACAGTGCAAT GGCCTCTTTTAAGTATGGCTGCTATAAAACATCAATGAAAGTTGGCAGTT ACAAGGTTAAATTTGCACATTGGCACTGAACCATAGATTGCTATGTTGTG CTGGAGAATTTGACAATACATGTACGAAGACATGTGACAAGATTGTCGTT AGTTGGGCTATAATTGCCCCCTTAGTGATTATACCTGTAAAGTCTGGTGA ATCTTTCACTCACTAATGTCTATATTTGTATGTGAACAAACTATTTATGA CACGTTTAGATGCAACCGTATGGAGAAGTGCTATATTTGTCTAATTGATG ATGAACTAGGGACTATCTTGTTACATGTTGGGGCTAAGAGTTATGCGATA ACTACTACTGCAACCAAGTCAAGTAAGTTCAATAAGGTGGCTTAGAAAAA GCTCTAGATAGCTAAACAAATGCTATATCCTACTGCCTGTTACATTTGAT GTCAGCCCTAGAAATGTTACAACATAGTTTGCCACCCAGTGGTGATTTGT AGGGTGGTGATGGAGTAATATTTTGTTAGAACGTATCTACCAAATGTAGA CCTTTGAATGGAATGGATATGACCCACCTCAGGTTATTACCAGTATTGAA ATCTTGGTACAATCAAACCTGCCCAAGAAAACTACTAAGGAGACCGATAA AATCTGGTCTATGTGGACAGGTGGTCACTATTGACAGGATTCTTAGTGCT TGTTTGAGTTGTGGAAAAGTATCTAACTAAGGGACAACCAAAAAGTGGTC ATATTGGCCAAATGGTCCTTACCTGGTATGTAGAGGTGGTCACTTGTACA GGTTTGACTGTATTTAGCTCTGCTTTTGGGAGACAATGTACGTAATATAG TAATGTGCTGTAGTAACCGTGCAGCATGCGGATATAACATCACAAATACT GTGGCTAATCCTGGCCATGAAACAACACAGATCTTAAAAAGTGTAATCTT GCGTACATCCCTCATTTTAAGATGGAAAAAAATGTTTGCGCTGTTAACCA TGAGGGATAATGATGAGTAAGTATTTTACTGTTATGTAAACATTTAGCAA TGTCTTAGTATACTGTCAATTTTACAACAGTAGTGAATAGAAAATGTTGT TTTTGTTACTAGACAGTTATTTTTTATTTTATTCAAATTATTACACTCTA GAAAAGTCAGACTAAACATGAAACATAAACAAGACTGCACTACAGATGTT TTGTGGATTTGGGAAGTAAATTGTTTCACGATGTTTCTTTTTTGAAATGT GTTATCAAATATTGCAACTTAAGTTTCTGTGAACATTTAAAGTGAAGTTT TGAAAGATAGACACAAAATAACTTGTCATCAAATCTGCTGCTGTAAAACA TCATTTTGTAACAGTAATGATAATAAGTTTGACATAAAATCATGACATGA TGCTTTTTCCTGCCATTATCTGTGCAAAATTCACCTTCAAGTTTGAATAT TCTTATGTGTATACCAAAAAGGGATGTAAGGGAAAAAATAGAATGTGAAA TACACTTGTTTGTTAGTTTGATGTTTTTTTGGGAAGGGTTTGTGCAAGTT TATCTGTCTATGCAAAGTGGTCAACTTGTTTTGGTAGTAAAAATTGACAA ACATAAAAATGTTTATTAGCAACAAGGTTTGTAGCTATTATTATGGTCTG TGGCTGTCAAGTGCTCTCCTTTGTTCTACATTTCCACTATCAAAGGTTGT CTTGGACAATCAAGCCACTGATGTTCACTCAATTGTAACATAAATAAATA AAAATAAATAAAATTCTAGAAATAATCCTTCAAATCATAGTATGTGACAG TAAACAACAGACTGCAAAACAAGACTTGCCAAATAGAATACTTTCATTTT CAATACTTTACTTCACCAAGAATCATAGAACACCTTGAGCTTCTATTGTT CATTGTGACCTACATGTATTCAAAGAACATGATACATTTGTATTGGCAAA GGGAAGTTTACAAGCGAAGTACAGTGTTACATGCCTTTGAATTAAAAGCT CAGCTTTTTTTTTGTAACAGAGCAGCTTACAGCCCTCTTTAAGTCGTTAT CGTTTCTACAGTGATAAGAAAATAATGTTCACAGCAG

Coding sequence (CDS) from alignment at Sc0000020:3193153..3202189-

>Blg03275.2 ID=Blg03275.2|Name=Blg03275.2|organism=Branchiostoma lanceolatum|type=CDS|length=984bp|location=Sequence derived from alignment at Sc0000020:3193153..3202189- (Branchiostoma lanceolatum)
ATGACGTCAAACGAGTGTGACCTTTCACCCCACTCTCCCAACATGGCCGC
CCAGACAGAAGTGAAGAAGACGATGCCCAAGTACGTCAAGTTCCTCTTTG
GAGGACTTGCGGGCATGGGTGCAACTCTATTTGTTCAACCTCTGGATCTG
GTGAAAAATAGAATGCAGCTAAGTGGTGAAGGGGGAGGAAAGAGACAATA
TAAGACCAGTTTTCATGCTGTGACAAGTATATTGAGATCTGAAGGCATAA
TTGGCATGTATACAGGGTTGTCTGCAGGGCTTCTACGACAGGCCTCCTAC
ACCACTACTCGTCTGGGCATCTATACCATTCTGTTTGAGAAGTTTAGCAA
GAATGGACAGCCTCCCAACTTCTTCATGAAAGCTGGCATAGGTATGACTG
CAGGTGCAATCGGGGCATTTGTAGGAACTCCTGCTGAGATCTCACTTATA
AGGATGACAGCGGATGGAAGATTACCGGTAGCTGAAAGAAGGAACTACAG
CAGTGTTTTTAATGCCTTGGCTCGGATAACAAGGGAAGAAGGCCTTTTTA
CATTATGGAGAGGTTGTGGTCCGACAGTGTCCAGAGCTGTTGTGGTGAAT
GCAGCTCAACTGGCATCTTACTCTCAAGCCAAGCAGTTCCTCTTGGGCAC
AGGCTGGTTTGGTGATAACATCCTGAGTCACTTTGTGGCCAGTATGATCA
GTGGCCTGGTCACCACTGCTGCCTCCATGCCAGTGGACATTGCAAAAACC
AGGATACAGAACATGAAGGTCGGACCAGACGGAAAGGCGGAGTACCGTGG
TGCGCTTGACGTGCTGTACAAGGTCATCAGACAGGAGGGGCTGTTCAGCC
TCTGGAAGGGCTTCACGCCGTACTACTTCCGCCTGGGCCCGCACACCGTC
ATCACCTTCATCTTCTTGGAGCAGATGAACCGTATCTACAGAAAGGTCGT
GCTGGGGGAGGAGGGGACGGGGAGTAGCCTCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03275.2-exon-Sc0000020-1570713199:3201959..3202189Blg03275.2-exon-Sc0000020-1570713199:3201959..3202189Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3200287..3200348Blg03275.2-exon-Sc0000020-1570713199:3200287..3200348Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3199830..3199920Blg03275.2-exon-Sc0000020-1570713199:3199830..3199920Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3199073..3199197Blg03275.2-exon-Sc0000020-1570713199:3199073..3199197Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3198529..3198607Blg03275.2-exon-Sc0000020-1570713199:3198529..3198607Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3198214..3198304Blg03275.2-exon-Sc0000020-1570713199:3198214..3198304Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3197783..3197873Blg03275.2-exon-Sc0000020-1570713199:3197783..3197873Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3197229..3197328Blg03275.2-exon-Sc0000020-1570713199:3197229..3197328Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3195839..3196150Blg03275.2-exon-Sc0000020-1570713199:3195839..3196150Branchiostoma lanceolatumexon
Blg03275.2-exon-Sc0000020-1570713199:3193153..3195726Blg03275.2-exon-Sc0000020-1570713199:3193153..3195726Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03275.2Blg03275.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:3193153..3202189 -
Properties
Property NameValue
GeneIDBlg03275