|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:3189969..3194830+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03248.3 ID=Blg03248.3|Name=Blg03248.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4862bp|location=Sequence derived from alignment at Sc0000020:3189969..3194830+ (Branchiostoma lanceolatum)
ATTCATGGCTGCAGCCCGCCCGAGTTGGAATCTGCTATCCTTGGTCACAA
AACGGGCGTTTTCCCCCGTAAATCTGCCCCAAACTGGCCCGACAATTCGT
TTCAGATATTCTACAGCTTTTCGTGATAAGCCCGGTCGCCATTTTCCCCA
CAGGTTAGCCAAAAACACCGACAAAAAACTTTTGTGGAGTGAGAAGATTT
TGTTGTCCTCGTGCCTTTCACGATCTAAATGTCAAAGGTCGCATCTGCCA
AAATCCAGGGGAGTTATTAGTAAATAATACGTTTTTGTAACTTCAAAGAC
TAGCAATGATAAGTCATTTTAGTCCCTATATATACATATCATTATTGTAA
ATTGTTAGTTGGTGGAGAATTATGAATGATTATTGTCTTTATATACTGTA
ATTTGTGAATAAGATAATATGTACACCCCTATGTTTCGTGTGTTCCCTAC
CAGACAACATGGGGGACGAGGACGTGACAGCGTTGGTGATCCTGGCCGAA
GGTGCAGAGGAGATGGAGACAGTCATCTCGGTGGACGTCATGCGCCGCGG
AGGGGTGAGGGGAGGGGATAAACTATACACTATACACAGTCGACGACTGA
AAAGTATCTGGCACTCTTAGAAATGGCTGGTGACAAGAGAGAGCTACGTG
CATCTGAAAATACAACATGGACATGAGATTATGAAATTCTGATCAATTTG
GTAAGATACTTAAGTAGAACAGAAACAAAGGAATTTAAACAAGATATTTA
TTCAAAGTACTACGGGTTATCCCCAATGCATCACAATGGCTTGACTGCAG
CAATTGATAACGTACTGTTTTTTTAGATGCCCCTCCCCCATAATTGTAGA
TGGGGGTGTGGCCATACCAAGTATATAGTACCTAAAATATAGGTCATCTA
TGGATATGGTATGACAGTCTGGCTGACGTGTAAGGTTATGAAGTTCACAG
TTCACAGTTATACAGAACATGGAGTCTCTAACAAGGCTTTCATAGTGCTT
GCGTATGTTTCATATTTTAGTATATAGTCATAATTGCTTTTGCCATAAAT
TTGTAACCATGTTTTGCCCCCAGATCAAGGTGACCCTTGCAGGGCTGGCT
GGAACTGACCCGGTCAAGTGTAGCCGTGACGTGGTCATCTGTCCGGACAC
CAGTCTGGACGAGGCTCGCAAAAAGGTGAGCATCTTGTTTAGACATCTTC
TTCACATTTCAAATATACAGTTAATCATAACTTGGTAAAACAGGATTTCA
ACATGGTGGGATATAATGTTATGTTTTGTCAATATCATCCTGCACCCGAT
GACTTTTTCATATCACAGAAGTCTGCAAAATGATATATCTATCTGTTATG
AGTAAAGAATACTGCTAACATTATATTTCCCAGGGTCCATATGATGTGGT
TTTGTTGCCTGGAGGACTGGGAGGAGCCAAGAACCTGGCTGCTGTAAGTT
ATAACTTGTTAAATATTTGAAAATTGGTTTTCTGACTTGAAAGACACAAT
TGATTATTTGTACACGTATGTCACATGTACATGCACAGTACATTATTTTG
TAAACAGTATGTTACTAGTATTAAGAAATGAGAAATTAAGATTAAAGTTT
TTTTTTAAAGTTAAAGTCCTCTCACACCTGACAGTGTATAGGGCGGCGCC
CTTCTCTGTTTCAGTAGCCCTTGGGCCACACAACTTTGTGCAATCACTAC
AGCAGGGGGCTAGTCCACTGGAAGTGGTGTGTGTTTAACTACTAGTACTA
TACTCTTTGAAAAATGACCACCTTCTTGTTTCCTTCTGACCTCTATAGTC
CCCCAAGGTGAAGGAAGTGTTACAGGAGCAGGAAGGGAAGGGATCTCTGG
TGGCTGCAGTGTGTGCAGGTCAGGGTCCTTTTAAACATGGAATAAGAAGT
GGAGTAATCTATAACAGCATCTCATAAACTTTCTCAATTTTGTTTTGTTT
AGTTTTGCACAGAGGCATGTGTCCTTCTTAATGCAAATTGAAGAGGCTAC
CAACAATATAGAACCACTTGCTAATCTAGAAGCAGATGTAGCAGACTTGT
TTTGGGCATTTTTGGTGGTATTTTGTATGTTTTTCTGGAGGTGTTTCGTA
CATCTTTTAGGGGGTGCACTCTTTTCAACTCCTGCTGGAAAATGTGACCA
CCTCCAGGAATAGGTACAAAACACCTCCAGAAAACACTGCCTGAAATGCT
CAAAAGAAGCCCATCTGCTTGGAGATTAACCTTCTGCATATCTCAGGTCC
CACAGCATTGGTGAGCCATGGCATTGGGAAGGGAAAGACTGTCACCTCTC
ACCCCAGTGTGCAGAAGGTTATGGAGGAAGGTAAGTTCTAACTTCTTTCC
CAAATCAAAGATTTCACCAAAAATTTAGAAAGGCAAAAACAGCACAATGG
AAATGGTGATGCTGTTAGATTCAATATACATTATGTATATGAATGATGCG
TGATCATATGTTGGTAAAAGGTAGTCCCGTGGCCTTTTTGAGGCCATAGG
GGCAGCGGGTTGTTATCCACTGTGTCTAGGCAAGGAGGTCTAGGGCACAG
TATTGGAAGGTGAAGCCCAACCCTCTCCTTCCACCACTTTTTAGCTCTCC
AATCGAAGTCAGATACCCACTTTTACAAGTCCTGTTGCTCAAGATCAGAA
CTCTATATTAGACTGAAAATCTGTAAAACTCATCTTTAGTATCTGTGTTG
AACTTTAACTTTTCCTGTTGTATTCCAGCTGGCCATCCCTACACAGAAGC
CCGAGTGTCCAGAGATGGTCACATCATCACCAGCAGGGGCCCCGGAACAT
GCTTCGAGTTCGCCCTGCAGATCGTGGAGACGCTCCGAGGCAAGGAGGTG
GCCGACAAACTGGTCGCTCCCATGCTCGTCAAACTGTAGCTTTGTCCTCT
GTCGATCCTCCAGGGATCTAAAGCATTATTTGTCTATCAAAGCAGATGGA
AAATCTTCAAACTAAAGTGGTGAATTAGATACGTTATGTTGCTTATGCCT
GTAAAGGAATTGTTGAAACTGCAGCAGGAAAATCAGTTTTGACAGAAAAA
TCTTCAAACTGAAATGGTGAAACAGATATGTTATTTTGATAATGACTATG
AAGGAATTGTTGAAACTGCAGGAAAACCAGTTTTGAGCTTGGCAAGTAGG
AAGTATAATGGTATGAAGTTACGTCTTTCCAGTGCTGCTGTGAACATTAT
TTTCTTATCACTGTAGAAACGATAACGACTTAAAGAGGGCTGTAAGCTGC
TCTGTTACAAAAAAAAAGCTGAGCTTTTAATTCAAAGGCATGTAACACTG
TACTTCGCTTGTAAACTTCCCTTTGCCAATACAAATGTATCATGTTCTTT
GAATACATGTAGGTCACAATGAACAATAGAAGCTCAAGGTGTTCTATGAT
TCTTGGTGAAGTAAAGTATTGAAAATGAAAGTATTCTATTTGGCAAGTCT
TGTTTTGCAGTCTGTTGTTTACTGTCACATACTATGATTTGAAGGATTAT
TTCTAGAATTTTATTTATTTTTATTTATTTATGTTACAATTGAGTGAACA
TCAGTGGCTTGATTGTCCAAGACAACCTTTGATAGTGGAAATGTAGAACA
AAGGAGAGCACTTGACAGCCACAGACCATAATAATAGCTACAAACCTTGT
TGCTAATAAACATTTTTATGTTTGTCAATTTTTACTACCAAAACAAGTTG
ACCACTTTGCATAGACAGATAAACTTGCACAAACCCTTCCCAAAAAAACA
TCAAACTAACAAACAAGTGTATTTCACATTCTATTTTTTCCCTTACATCC
CTTTTTGGTATACACATAAGAATATTCAAACTTGAAGGTGAATTTTGCAC
AGATAATGGCAGGAAAAAGCATCATGTCATGATTTTATGTCAAACTTATT
ATCATTACTGTTACAAAATGATGTTTTACAGCAGCAGATTTGATGACAAG
TTATTTTGTGTCTATCTTTCAAAACTTCACTTTAAATGTTCACAGAAACT
TAAGTTGCAATATTTGATAACACATTTCAAAAAAGAAACATCGTGAAACA
ATTTACTTCCCAAATCCACAAAACATCTGTAGTGCAGTCTTGTTTATGTT
TCATGTTTAGTCTGACTTTTCTAGAGTGTAATAATTTGAATAAAATAAAA
AATAACTGTCTAGTAACAAAAACAACATTTTCTATTCACTACTGTTGTAA
AATTGACAGTATACTAAGACATTGCTAAATGTTTACATAACAGTAAAATA
CTTACTCATCATTATCCCTCATGGTTAACAGCGCAAACATTTTTTTCCAT
CTTAAAATGAGGGATGTACGCAAGATTACACTTTTTAAGATCTGTGTTGT
TTCATGGCCAGGATTAGCCACAGTATTTGTGATGTTATATCCGCATGCTG
CACGGTTACTACAGCACATTACTATATTACGTACATTGTCTCCCAAAAGC
AGAGCTAAATACAGTCAAACCTGTACAAGTGACCACCTCTACATACCAGG
TAAGGACCATTTGGCCAATATGACCACTTTTTGGTTGTCCCTTAGTTAGA
TACTTTTCCACAACTCAAACAAGCACTAAGAATCCTGTCAATAGTGACCA
CCTGTCCACATAGACCAGATTTTATCGGTCTCCTTAGTAGTTTTCTTGGG
CAGGTTTGATTGTACCAAGATTTCAATACTGGTAATAACCTGAGGTGGGT
CATATCCATTCCATTCAAAGGTCTACATTTGGTAGATACGTTCTAACAAA
ATATTACTCCATCACCACCCTACAAATCACCACTGGGTGGCAAACTATGT
TGTAACATTTCTAGGGCTGACATCAAATGTAACAGGCAGTAGGATATAGC
ATTTGTTTAGCT Coding sequence (CDS) from alignment at Sc0000020:3189969..3194830+ >Blg03248.3 ID=Blg03248.3|Name=Blg03248.3|organism=Branchiostoma lanceolatum|type=CDS|length=513bp|location=Sequence derived from alignment at Sc0000020:3189969..3194830+ (Branchiostoma lanceolatum)
ATGGGGGACGAGGACGTGACAGCGTTGGTGATCCTGGCCGAAGGTGCAGA
GGAGATGGAGACAGTCATCTCGGTGGACGTCATGCGCCGCGGAGGGATCA
AGGTGACCCTTGCAGGGCTGGCTGGAACTGACCCGGTCAAGTGTAGCCGT
GACGTGGTCATCTGTCCGGACACCAGTCTGGACGAGGCTCGCAAAAAGTC
CCCCAAGGTGAAGGAAGTGTTACAGGAGCAGGAAGGGAAGGGATCTCTGG
TGGCTGCAGTGTGTGCAGGTCCCACAGCATTGGTGAGCCATGGCATTGGG
AAGGGAAAGACTGTCACCTCTCACCCCAGTGTGCAGAAGGTTATGGAGGA
AGCTGGCCATCCCTACACAGAAGCCCGAGTGTCCAGAGATGGTCACATCA
TCACCAGCAGGGGCCCCGGAACATGCTTCGAGTTCGCCCTGCAGATCGTG
GAGACGCTCCGAGGCAAGGAGGTGGCCGACAAACTGGTCGCTCCCATGCT
CGTCAAACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03248.3-exon-Sc0000020-1570713199:3189969..3190121 | Blg03248.3-exon-Sc0000020-1570713199:3189969..3190121 | Branchiostoma lanceolatum | exon |
| Blg03248.3-exon-Sc0000020-1570713199:3190422..3190522 | Blg03248.3-exon-Sc0000020-1570713199:3190422..3190522 | Branchiostoma lanceolatum | exon |
| Blg03248.3-exon-Sc0000020-1570713199:3191042..3191143 | Blg03248.3-exon-Sc0000020-1570713199:3191042..3191143 | Branchiostoma lanceolatum | exon |
| Blg03248.3-exon-Sc0000020-1570713199:3191767..3191836 | Blg03248.3-exon-Sc0000020-1570713199:3191767..3191836 | Branchiostoma lanceolatum | exon |
| Blg03248.3-exon-Sc0000020-1570713199:3192215..3192298 | Blg03248.3-exon-Sc0000020-1570713199:3192215..3192298 | Branchiostoma lanceolatum | exon |
| Blg03248.3-exon-Sc0000020-1570713199:3192697..3194830 | Blg03248.3-exon-Sc0000020-1570713199:3192697..3194830 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:3189969..3194830 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03248 |
|
