Blg02988.0 (mRNA) - B. lanceolatum

Overview
NameBlg02988.0
Unique NameBlg02988.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001087:6734..9647-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02988.0 ID=Blg02988.0|Name=Blg02988.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2914bp|location=Sequence derived from alignment at Sc0001087:6734..9647- (Branchiostoma lanceolatum)
ATGCGTAAATACGGAAAATACGTCGACGTTAAGTACTGTTTAAGCATCCG TAAATATCGTTTTTCGTGCCGTGAGAGAGCCAGACAGAGAATCAGACAGA AGGTAAGACGGACGGTAAACCAGACAGCCAGAGACCTAGTCAGACAGGAA GCCAGACAGAGAATCAGATAGAGGGGCAGGACAGACGGAAAACCAGACAG CCAGAGACCTAGTCAGACAGAAAGCAAGTCAGAGAATCAGACAGAGGGTC AGACAGACGGAAAACAAGACAGCCAGAGACCTAGTCAGACAGACAAAGGG CCAGCCCCAAAAAGAGCAAGTCAGAGGATAAACAGACAATAATCAGGCAG ACCGAGACCTAGCCAGACAGAAAGCCAGTCAGAGAATCAGACAGAAGGTC AGACAGACGGAAAACCAGACAGCCAGATACCTAGTCAAACAGGGAGCCAG ACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAG ACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAG ACGGAACACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAG AATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAG TCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAA AACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAG ACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGAC AGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAG ACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAG GGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAG CCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCC AGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAG ACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGAC AGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGAC CTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGAC GGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAA TCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTC AGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAA CCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGAC AGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAG GGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGAC AGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGG TCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCC AGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAG AGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGAC AGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAG AGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCT AGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGG AAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATC AGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAG ACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACC AGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAG AGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGG AGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAG CCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTC AGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAG ACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAG ACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAG ACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAG AATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAG TCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAA AACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAG ACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGAC AGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAG ACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAG GGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGAAG CCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGTAAACCAGACAGCC AGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAAGGTCAG ACAGACAGAAACCCAGACAGCTAGAGACCCAGTCAGACAGGGAATCAGAC AGAGAATCATATAG

Coding sequence (CDS) from alignment at Sc0001087:6734..9647-

>Blg02988.0 ID=Blg02988.0|Name=Blg02988.0|organism=Branchiostoma lanceolatum|type=CDS|length=2670bp|location=Sequence derived from alignment at Sc0001087:6734..9647- (Branchiostoma lanceolatum)
ATGCGTAAATACGGAAAATACGTCGACGTTAAGTACTGTTTAAGCATCCG
TAAATATCGTTTTTCGTGCCGTGAGAGAGCCAGACAGAGAATCAGACAGA
AGGCAGACCGAGACCTAGCCAGACAGAAAGCCAGTCAGAGAATCAGACAG
AAGGTCAGACAGACGGAAAACCAGACAGCCAGATACCTAGTCAAACAGGG
AGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAG
CCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTC
AGACAGACGGAACACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAG
ACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAG
ACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAG
ACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAG
AATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAG
TCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAA
AACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAG
ACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGAC
AGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAG
ACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAG
GGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAG
CCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCC
AGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAG
ACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGAC
AGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGAC
CTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGAC
GGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAA
TCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTC
AGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAA
CCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGAC
AGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAG
GGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGAC
AGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGG
TCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCC
AGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAG
AGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGAC
AGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAG
AGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCT
AGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGG
AAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATC
AGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAG
ACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACC
AGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAG
AGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGG
AGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAG
CCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTC
AGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAG
ACAGAGAATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAG
ACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAG
ACGGAAAACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAG
AATCAGACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAG
TCAGACAGGGAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGAA
AACCAGACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAG
ACAGAGGGTCAGACAGACGGAAAACCAGACAGCCAGAGACCTAGTCAGAC
AGGAAGCCAGACAGAGAATCAGACAGAGGGTCAGACAGACGGTAAACCAG
ACAGCCAGAGACCTAGTCAGACAGGGAGCCAGACAGAGAATCAGACAGAA
GGTCAGACAGACAGAAACCCAGACAGCTAGAGACCCAGTCAGACAGGGAA
TCAGACAGAGAATCATATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02988.0-exon-Sc0001087-1570713199:9546..9647Blg02988.0-exon-Sc0001087-1570713199:9546..9647Branchiostoma lanceolatumexon
Blg02988.0-exon-Sc0001087-1570713199:6734..9301Blg02988.0-exon-Sc0001087-1570713199:6734..9301Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02988.0Blg02988.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001087genomeSc0001087:6734..9647 -
Properties
Property NameValue
GeneIDBlg02988