Blg02983.1 (mRNA) - B. lanceolatum

Overview
NameBlg02983.1
Unique NameBlg02983.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000127:367243..372733-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02983.1 ID=Blg02983.1|Name=Blg02983.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5491bp|location=Sequence derived from alignment at Sc0000127:367243..372733- (Branchiostoma lanceolatum)
CTCCACTAATTGGTGAACTCCACGTCAGCTTTTAGGGAAGTGGAAGTTGT TATGGTCTGATGTGTTGCACCAAGAGTTGCCGCCTTTTCTCGTCCGTTCC TCCTGTTCCTGGCTTTTCTTGGTGGATTTCTCAGCTCAGAAATGTTCAAG GACACTACTGAGACGATCAAGGAGCCGTGAAAGATCGCAGAACTTCACAA GAAACCGTTTAAACGTGGATGTCGTAGCGCCGGAAACACAACAACATGAT GATGTTTTTGTGGGTCCACTTTGTTTTATCGTTAGTTTTGACGACGTCTC CTGTGTTTTCTGAACGCGCCACGCCGACTACTTTATCTGTACCGGAGTCC TTACTCTTCGTTTCAACTCTAGACGGTACTCTGTACGCTATCAGCCACAG AACCGGGAAAGTACGATGGATGTTAAAGGAAGATCCCGTCATACAAGTTC CTACAGACATCGCCACAGGACCAACCTTCTTACCAGATCCTAAAGACGGT TCTCTGTACATCTTCGGGGGTTCAGGGACTACAGAAGGACTGGCAAAACT CCCCTTTACGATCCCAGAACTTGTCAACGCCTCTCCCTGTAAGAGTTCGG ACGGGATTCTGTATACAGGGAGGAAGACTGATACGTGGTACGCCATAGAC CCGGTGACTGGGATCAAACAACAGAAGTTGACCATGGAGGGTACAGACAG GGTCTGCCCTAGTTCCGACGCCTCGACTCTGTTTCTGGGTACGCCCTTAA AGATACATCTTAAAGATTCTGTACAACATTACAGACGGTTTTCTTAAAGG TGCTCTACATAAGATTTTGGTACAAAAATTGCCAGATATTCTGGGGAACA AAATTTTCATGGAAATGACACTTTCCAGCACACTTGCATCATTGTTTTTG TATTTTTGGTGTTTGTGAACCGCTGGGTTTCTGAAACCATCTCAAACATT CTATATTGTGCAAATGTTCCATGGAGTACCTTTAAGGACATTGTTTTTAT CAGACGTCTGTTCCACTCTCTGGTTGGTTGTCAAAACAATTAAGTAGACC AAGGACATTATATCCTATATAATGTCCTTGAGTAGACACAGGTGTCTTTT TGACAACAAAATTACGACACACCTGTGCTTAAGAAGTTAAGATGATCATG TGATATTCTTTGTTGTAGGAGTTCATTTTTATGACTGCATCTGTAATGTG TATTGCAAATACTGAGATTTGCAAAGAGAACGAAGAAAAAGGGGAGGGTC TTTGTTACACCATGTGATAAACTTTGAGGATGATGCAACATTGTCACCTT GCATTGTACAGTTACTGTAGCTTTTGTCTGAAGTTGCATAATATCTAAGC AGGTCTTCCGCTGGTAAAATCTTAACTACTGGGCCAAGAGCCCAAGACTA TGGCCCATGGTCCAAGGATTTGTCCATGGGCCATGGGTCAGCAGTTACGA TTTTGCTGCCGGTAGGTCTTTGAGATTAGAGGGAACACTGATAATTTGTG ACTAAGGCAGACATTAAGATTCTTATGAAGTTCTTTAAGGATTTGCATTG TTAATTTGTACTCTAAAACAAGATTGAGGTCTATACAATGGAGTTGTGCC AAAATGTACAACTTTGTTATAGTGAACATTCATGTAACCCAACCGTTCCA TCTTACCTTGATTTATGATGATGCCATCTATTGATTTGTACTATGACAAA TATGAGGTTTCATAAACATATATAAATTTGTGTTTCATGTATCATGCATT TGTATTTTCCGATGATATCATTGGATGATTACATCTATTGATTTGTATTA TGACAAATATAAGGTTTTGTAAACAAAGATTTTTGTTTCGTGTAACATTA TATTTTCCAGAGTTTTTTTATGATAGCATCTTTTCTTCTTGGAAGAAGAT AGCATCTCGTCTTCTTGGAAGAAGATAGCATCTCGTCTTCTTGGAAGAAG ATAGCATCTCGTCTTCTTGGAAGAAGATAGCATCTCGTCTTCTTGGAAGA AGATAGCATCTATTGATTTATATTATGACAAATATAAGCTTTCATAAACA CAGATTTTTGTTTCATGTAACGTTATATTTTCCTGTTTTCTATCCATAGG TCGAACGGAGTACAACATCGCCATGTTTGACAGTAAGACGCGTGAGCTGC GGTGGAACGTTACGTACATGGACTACTCCGCGCACGTCGCCAAGGACAGC AGCGACTATCCCCTGCGCCACTACTGCTCCAGCTCCGACGGTCTCATGAT CACGGTCGACTCCGCGTCGGGGAAGGTATTATGGGATGGAAACTTCACCT CCCCCGTCATCGCCATGTACGCCTGGGACAAAGACGAGATGAAGAAAGTA CCGTTCACAAACATCGCCATGGAAACGCTGGAACAGATCGTTGGTCAAGT CAGGGTGCCCGCTTGGGGTGAACTCATCATGGGCAAGTCCCAGGAAACCA AGCTCCTGCCTACGCTGTTTGTCGGGGAGTATGCCCACGGTTTGTACGCG ATCCCGTCCCTTGTAGATGAGGATGTGACGGTCTCCCCCCGTAACGAAGT ACCCCTGCTAGACGGGCCGACTCCAGCACCGAGCCTGCCCACGACGACGT CTATCCCCAGTACCGGGATGCACAGCGAGTCCGCCCGCGCTACCACGAAG AGAAGGGGTTCCGTGGTACTCGGCCATCACGAGTCTCCGCTCGTTGTGAA CTCTCGCTTGCAGCCCAGCCGACATATTCCCCACAACACCGCAGACCCCA ACCTGCCCATACGCGAGGATGGCAACAGGAAAAACAGAAGCAACCCAGAT GTGTTGATAGAATATGAAGAATCTAGCATTCCTGACTGGCTCATACTTGT AAATGGTATTGTTATTGGGGCTATTGTTCTAGTGGTAATAATGGTACTGG TCAAACAGTACAGGAGTGAGCCGCAGTCCTCACGCCTGTCTCGCTTGAGC GAAACATCGACCGCCAGCTACGGTGAAGGATATCCGAACGAGGAGGGCGA AGAAGGTTATCACCAGGTCGGGAAGATCATGTTCAAGCCGGGAGACATCC TCGGATACGGCTGTGAAGGTACCATCGTGTACAAGGGACGATTTGACAAG CGAGACGTAGCGGTCAAGCGAATCCTTCCAGAGTGCTTCAGTTTCGCGGA CAGGGAAGTCAACCTACTGCGAGAGTCGGACGAACATCCGCACGTCATCC GGTACTTCTGCACGGAGTCCGACAAGCAGTTCAAGTACATCGCTCTGGAG CTGTGTGCCGCGACCCTGCAGCAGTACGTACAGAATAAAGACTTTGAGCG GTGGCACTGTCTGGAGCCTATAGAACTGCTGTATCAGGCTATGTCTGGGA TAGCCCACCTCCACTCTCTCGGCATTGTACACAGAGATGTCAAGCCACAC AACGTCCTGATATCCCAGCCTAACGCACACGGACAGGTCAAAGCCATGAT CTCGGACTTTGGATTATGCAAGAAACTAGCTCAGGGAAGACATTCTTTCT CGCGGCGATCCGGCGCGGCAGGAACGGAGGGGTGGATCGCACCGGAGATG TTGGACGACGAGAAAAGGACCACCTGCTCGGTCGACATCTTCTCAGCGGG ATGCGTGGTGTTCTACGTGTTGACCATGGGGAAGCACCCGTTTGGTGACT CGCTGCGGCGACAAGCCAACATCTTGTCGGGAGAGTACAGCCTCGACGAT CTGTGCGTGAAAGAAAAGGTGAAAGAAGTTTCCCTGTCTCCCATGTGGAC ACGGAAAGTGCAGAAGCCGACGGTACTTCCCAGAATAGACGAGAGCCAAC GTGTCGCAGCGAAAGAGTTGATCAAGATGATGATCCGGCCAGACCCGACG ATGCGTCCGACGGCGGGGTCCGTCCTGAAGAGCCCGTTCTTCTGGAGTAA GGAGAAGCAGCTGCAGTTCTTCCAAGACGTGAGCGACAGGATCGAGAAGG AAGCGCTCGACGGAGCGCTCGTGACGGAGCTGGAACTCGGCGGCAGGACT GTCGTGAAGGGCGACTGGCGGTCGCGTATCGGCGTGGAGCTGCAGACGGA TCTCCGGAAGTTTCGCTCGTACAAAGGCGGGTCGGTGAGGTGCCTCTTGC GTGCGATGCGTAACAAGAAGCATCACTACTTGGATCTTCCCGAGGACGTC AGACGCGCTTTAGGCAGTGTCCCTGACGAGTTCGTGTCGTACTTCACACG TCGCTTCCCGATGCTCCTCTGGCACACGTACAAGGCCATGCTGTGTTGCA GGAACGAGAGAGTCTTCCACGGGTACTACGAAATGGACGACAAGTCAATA GTGCCGGCAAAACTTCCGCCGAGAAATAAGGAAGACTCAAAACAGAGTGT AGAAGAAGTGACCCATGAAAATGGACAACAACAGAAAGAAACAGTGAAGA ATTCTGAAGCAGTTGACAAAAGACTAGATAAAGGAAATGATGTGGAAACA CACAGGAGAAATAAGAATGCAAAGTCTTAATTTCTGTGACTTCAAATTGA AGAAGGGACCAACATTGTAAATGTCTTAAAAGTTAGTCACAACAGACATG TCTTCTTAACTTGTATATAACACAGAGAAGAATGTATTTGATGTGTATTT TTGCTCTGGAAGAAGTTCAGAACTATTTTAATAGATATAAATGCTACTTT ATTAACTGATATTATGCTTCTCATATGAATATGACAATTATGTACATAAA CTATTGGAGAAATTGCTGTATAAAATGTTGGTACTGGTATGTATATGTAT ATGTTGTATTTGGAGGTATGCTGCTGCGATGCCCAAGAAACTGGTGGAAA GGAACTGCAATTTTTAAATCATTGATTAATAATTAATGTCCTCAATCTAA CAGAGACATGTTTACCTATGGAAAGAATTCACATGTGACTAGATTATAAA TCTATCTTGCCTGTTCTTGTTCTTGACAGCTACATGTAGACCTGGAAAAT TTTTTAAAAAGATTTCATAGCTTGGACTACTAGAAATTATGTCTGAAACT TTTGTCCTATCTTTACTGTGTTAACCCAAGGATATTTTAACCTCCTTGGT CAACCATAGTTTACCACAATTTACCATAGTGTTTTGTTTTCCATGTGAGC TTGGTTCGTTTGCTGTGTATTGGGAAACTTGTGAGGAATACTTTTATCAA GTGACAAAGAAACTTGCTTTGTCTTTGGGGAAATGTCTATAGATCTATAC CATGTCATAATGTTGTACCCAAATCTCCAAGCAGATGTTGGAAGGCAAAA TCATTCTTCTAGCTTTTTCCTGTTAGATCTAGAGGGTCAACTGTTGTTTT TAACAGAAGCAGGGAGAATATCTACTTGGAGATTAGTGGCATGCTTCTAA TTACACCTTTAGATAATTTGTTGTGTCAGTGCAACCAAGAATATTAAAGA AGGAAAATTTTTGAAAAGATGATGCTTTCCTCAATTAGGTGTCATTTTTT AGTAACATAGACCCAAAGGCCATGTTGATTTGATTATATGG

Coding sequence (CDS) from alignment at Sc0000127:367243..372733-

>Blg02983.1 ID=Blg02983.1|Name=Blg02983.1|organism=Branchiostoma lanceolatum|type=CDS|length=2874bp|location=Sequence derived from alignment at Sc0000127:367243..372733- (Branchiostoma lanceolatum)
ATGATGATGTTTTTGTGGGTCCACTTTGTTTTATCGTTAGTTTTGACGAC
GTCTCCTGTGTTTTCTGAACGCGCCACGCCGACTACTTTATCTGTACCGG
AGTCCTTACTCTTCGTTTCAACTCTAGACGGTACTCTGTACGCTATCAGC
CACAGAACCGGGAAAGTACGATGGATGTTAAAGGAAGATCCCGTCATACA
AGTTCCTACAGACATCGCCACAGGACCAACCTTCTTACCAGATCCTAAAG
ACGGTTCTCTGTACATCTTCGGGGGTTCAGGGACTACAGAAGGACTGGCA
AAACTCCCCTTTACGATCCCAGAACTTGTCAACGCCTCTCCCTGTAAGAG
TTCGGACGGGATTCTGTATACAGGGAGGAAGACTGATACGTGGTACGCCA
TAGACCCGGTGACTGGGATCAAACAACAGAAGTTGACCATGGAGGGTACA
GACAGGGTCTGCCCTAGTTCCGACGCCTCGACTCTGTTTCTGGGTCGAAC
GGAGTACAACATCGCCATGTTTGACAGTAAGACGCGTGAGCTGCGGTGGA
ACGTTACGTACATGGACTACTCCGCGCACGTCGCCAAGGACAGCAGCGAC
TATCCCCTGCGCCACTACTGCTCCAGCTCCGACGGTCTCATGATCACGGT
CGACTCCGCGTCGGGGAAGGTATTATGGGATGGAAACTTCACCTCCCCCG
TCATCGCCATGTACGCCTGGGACAAAGACGAGATGAAGAAAGTACCGTTC
ACAAACATCGCCATGGAAACGCTGGAACAGATCGTTGGTCAAGTCAGGGT
GCCCGCTTGGGGTGAACTCATCATGGGCAAGTCCCAGGAAACCAAGCTCC
TGCCTACGCTGTTTGTCGGGGAGTATGCCCACGGTTTGTACGCGATCCCG
TCCCTTGTAGATGAGGATGTGACGGTCTCCCCCCGTAACGAAGTACCCCT
GCTAGACGGGCCGACTCCAGCACCGAGCCTGCCCACGACGACGTCTATCC
CCAGTACCGGGATGCACAGCGAGTCCGCCCGCGCTACCACGAAGAGAAGG
GGTTCCGTGGTACTCGGCCATCACGAGTCTCCGCTCGTTGTGAACTCTCG
CTTGCAGCCCAGCCGACATATTCCCCACAACACCGCAGACCCCAACCTGC
CCATACGCGAGGATGGCAACAGGAAAAACAGAAGCAACCCAGATGTGTTG
ATAGAATATGAAGAATCTAGCATTCCTGACTGGCTCATACTTGTAAATGG
TATTGTTATTGGGGCTATTGTTCTAGTGGTAATAATGGTACTGGTCAAAC
AGTACAGGAGTGAGCCGCAGTCCTCACGCCTGTCTCGCTTGAGCGAAACA
TCGACCGCCAGCTACGGTGAAGGATATCCGAACGAGGAGGGCGAAGAAGG
TTATCACCAGGTCGGGAAGATCATGTTCAAGCCGGGAGACATCCTCGGAT
ACGGCTGTGAAGGTACCATCGTGTACAAGGGACGATTTGACAAGCGAGAC
GTAGCGGTCAAGCGAATCCTTCCAGAGTGCTTCAGTTTCGCGGACAGGGA
AGTCAACCTACTGCGAGAGTCGGACGAACATCCGCACGTCATCCGGTACT
TCTGCACGGAGTCCGACAAGCAGTTCAAGTACATCGCTCTGGAGCTGTGT
GCCGCGACCCTGCAGCAGTACGTACAGAATAAAGACTTTGAGCGGTGGCA
CTGTCTGGAGCCTATAGAACTGCTGTATCAGGCTATGTCTGGGATAGCCC
ACCTCCACTCTCTCGGCATTGTACACAGAGATGTCAAGCCACACAACGTC
CTGATATCCCAGCCTAACGCACACGGACAGGTCAAAGCCATGATCTCGGA
CTTTGGATTATGCAAGAAACTAGCTCAGGGAAGACATTCTTTCTCGCGGC
GATCCGGCGCGGCAGGAACGGAGGGGTGGATCGCACCGGAGATGTTGGAC
GACGAGAAAAGGACCACCTGCTCGGTCGACATCTTCTCAGCGGGATGCGT
GGTGTTCTACGTGTTGACCATGGGGAAGCACCCGTTTGGTGACTCGCTGC
GGCGACAAGCCAACATCTTGTCGGGAGAGTACAGCCTCGACGATCTGTGC
GTGAAAGAAAAGGTGAAAGAAGTTTCCCTGTCTCCCATGTGGACACGGAA
AGTGCAGAAGCCGACGGTACTTCCCAGAATAGACGAGAGCCAACGTGTCG
CAGCGAAAGAGTTGATCAAGATGATGATCCGGCCAGACCCGACGATGCGT
CCGACGGCGGGGTCCGTCCTGAAGAGCCCGTTCTTCTGGAGTAAGGAGAA
GCAGCTGCAGTTCTTCCAAGACGTGAGCGACAGGATCGAGAAGGAAGCGC
TCGACGGAGCGCTCGTGACGGAGCTGGAACTCGGCGGCAGGACTGTCGTG
AAGGGCGACTGGCGGTCGCGTATCGGCGTGGAGCTGCAGACGGATCTCCG
GAAGTTTCGCTCGTACAAAGGCGGGTCGGTGAGGTGCCTCTTGCGTGCGA
TGCGTAACAAGAAGCATCACTACTTGGATCTTCCCGAGGACGTCAGACGC
GCTTTAGGCAGTGTCCCTGACGAGTTCGTGTCGTACTTCACACGTCGCTT
CCCGATGCTCCTCTGGCACACGTACAAGGCCATGCTGTGTTGCAGGAACG
AGAGAGTCTTCCACGGGTACTACGAAATGGACGACAAGTCAATAGTGCCG
GCAAAACTTCCGCCGAGAAATAAGGAAGACTCAAAACAGAGTGTAGAAGA
AGTGACCCATGAAAATGGACAACAACAGAAAGAAACAGTGAAGAATTCTG
AAGCAGTTGACAAAAGACTAGATAAAGGAAATGATGTGGAAACACACAGG
AGAAATAAGAATGCAAAGTCTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02983.1-exon-Sc0000127-1570713199:371996..372733Blg02983.1-exon-Sc0000127-1570713199:371996..372733Branchiostoma lanceolatumexon
Blg02983.1-exon-Sc0000127-1570713199:367243..370634Blg02983.1-exon-Sc0000127-1570713199:367243..370634Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02983.1Blg02983.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000127genomeSc0000127:367243..372733 -
Properties
Property NameValue
GeneIDBlg02983