Blg02860.5 (mRNA) - B. lanceolatum

Overview
NameBlg02860.5
Unique NameBlg02860.5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:488810..498717+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02860.5 ID=Blg02860.5|Name=Blg02860.5|organism=Branchiostoma lanceolatum|type=mRNA|length=9908bp|location=Sequence derived from alignment at Sc0000037:488810..498717+ (Branchiostoma lanceolatum)
TGGCATTTCTTCACCATAATATTTTTCTACTTTCTCTATCAGTCGCTGTA TGCATTAGATTTTTTTGACGTAATAAAACATATCTCTGACCATATCATTC TATGCATCAGTTATTTCACTAAAAGACCTAAATGTTTATGGTGAAAGAAA ATAATGATCTCCCGTAGCTGTAATGGACGAGCCCTTTTTATGTTGAGTTG GCTGTGACTGCAGGAAAAAGGTAGGTGTATCTGTGAATAAAAATGCGAAT TTAAAGATTTTCTGGTGGTGATTGTCGGGCTTTGTGCCAGTTGTAGGATC CATGGCTTTCTCTAGAATTGTCTGTGTTTGTGCAGGTCCGGGAAACGACG GAATCATGACGGAAGGACGAGTTGAAGATGGAATGACAAACGTTCCTCTC TCTTCAGACGATAGTGAAGGTACAAAAACAAAAATATTTGTTTCACTTTC CCTTTTCACAACGGTGAATGACAATTATCCTCTCATCTATATCGTTAGGA AATCAGGTAATTTCTTATAGGTATCTATTCCGGTATAAATGTATGATCTG ATGATAAATTCCATAGCCAGAAATCTGAGTAAGTCATGATTGACATTTAA TCTCCAAGCAGATGTTGGTTGGAAAATTGTAATGTTTCTGACCAAGGACA TTATATAATGTCCTTATATAATGTCCTTGTTCTGACCATCTTGGTTTCTC AGAAAAGGCACATGCCCAGCCATTCAGAAAACAGTACAATTTTCTGTCCC AACATCTGCTTGGAGATAACACAAGCCTCATCCTTTCACTTTTTACGTCC AACTCAGTAGTAGAATCTCCTTGAAATTGAATGAATAACTAAGGATGAGC TATGGAATTGGAAATGTACATTTTGTATCTGCTGCACCAATACAATGACT GTACCCATAGATACATAAATGATATGTTTTAGTTGGTATCAGGTCTTTTC CCCCCCAGGTCGATTCCCCCCCAGTTGTTTCCCCCCCAGGTCGATTCCCC CCCAGTTGTTTCCCCCCCAGGTCGATTCCCCCCCAGTCGTTTCCCCCTGT CTGTACCTGACTAATGCATGGTAGTCGCTATGATTGCTAAAATGCACCAT CTACATACAACGAATATACACACCTTTATTCTGGATGAAATCAGCAACAT TATACCATATATAATGTTATATATACTTTTCGAGCAGGTGCTGATCTGCG CCCCATCATAACCTGACTGTGCAAGCCGGCGATTGTCAAGTCCGCCCGCT GCGCTTGACCAGGCCCACTCCGCCCGCTGTAGTCCCATGAATGTCACAAT GATTTACAGGATTAGAAACTTACAGCATAACTGACACTGCTTTCGTGTCA TTTTTCAGCGTATAGTAATCTGTTAGTAAGCATTTTTTTATTTATTTCTG ACAGTACTGTTGATATATAAAGATGAGGCAGTCGGAATTAATGTACTAAT CATAATTTGGGACCGCCCGACATTTCTGAGTAACGGCAGGCGCAGTGGGC TTGGTCATGACAGGCGTGAGGACTTGGAAATCGCCGCGCCGCCCGCTAGC ACAGGCGAGTTTAGCGGCACGCAGCTAAACTAGTAAAGTTTAGAACGTTA TACAGTACTTATAGAATAATGTGAAAGTAAATTGTGCATCTAGTATATTT AGAATCTAACGTGATAGTCACTAGCTAAACGTAACCTGGTTTACAGCTAG ACAGGGGGGGAAACGACTGGGGGGGGGAATCGACCTGGGGGGGAAACGAC TGGGGGGGAATCGACCTGGGGGGGAATCATCTTCACCAAGACGTTTCCCC CACTGGGGGGAATCGTCCTGAGGGGGAAAAATCTTGAAACCGTTTTAGTT CATGAACTCATGTGTATCTACCATGTTAATACATTTTAAAAGGTGAGGTA CCAGGAGGTGTGTGGAAGCAAAGCTCTACAGATGCTGTAGGGACCAGCAC AGGGACTAACAGCACCACCAGTAAGTATGCTTTAACCCGGCCTCAGAGTG CCAAGTAAGCTTTCATCTTATTGAAAGCAAAAAAATGTGTGTGTAAGTAA TGGTTTACCCCTCCACAAATGTGACATAAATTTGTAGATTGTTTTGTGTT GATGATTTTGAGGTACCATCCTACTAGTAAGTAGCCTAGCTAACCACAAG TAACATATGGATGAAGGTGTTTATTGGAATGATGAAAACCATTAATAAGT GTTGCAATGTTTGGGCTGTTTTACACATCAGGTGTTTCATCTTGTTTATT TCATCCTTTTGTCTTTTCAGGTCTGTGTGATGAAACATCTGATGAGGCTG AGGAGAAAGCGCGACTCATCTGTCAAGTGTTGGAGTTACAGAATACGCTG GATGGTGAATTAACATACTTTATCATCTAGAGCTTAATAGCGTTACTTTG CCCTTTTTCAANTAGAGCCTTAATAGTATTAATTTGCCCTTTTTCAAGCT AATGTTTGGATAAACTATCAAAAACAATGTTTCCCACAGAGGCACAGAGT GTGCAATGAATACCTTACTGTACACAAAAATGTATTCAAGTTAGGGTAGT TTGGTGTTCGCAGTTTTTAAATTGAAAGCACCGAAAAAAATTATTGTTCT GTCTTCTGCCCACCTACCACCTCGTTTCAACCGTGAACTAAAAGTAGAAA CCACCGCAAAATCTCCATTTTTTCCTTACCGCAAAATTAAATCATTGCAA ACTTCAATGTATTTGCAGTACTCTAATGTTCATGTCTGTTTCTTAGACTT GTCCCAGAGAGTGGATGCCGTTAAGGAGGAAAACCTGAAGCTGAAGTCAG AGAACCAGGTCCTGGGGCAGTACATCGAGAACCTCATGTCAGCTTCCTCT GTCTTCCAGACAACGTCCCCCAAGAGCAAGAAAAAGTAAGGGTGCTAAAC AGGGCTTAGAATACCTACCTGCAATTTGCAGAACATTTTTCTAGATTGCA TGATAGACAACGTTTGATTTTGCAAGGTAGCAAATGTCAGGCTTGGTAGG TTTAGTCTACTAAATGAAAAACTTATATTGTAGGTAACAGAAAAAAGGAT TTCAAGCCTGCTAACTATTGTACGCCAAAAAGCAATTACTCAAACAACTG GATATGATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCACTACTTTT CGTCAGTGACTGTGAGCAAGATCAGTTGAACAGCAGGTTTATAACCACGA ACTATGAATTGATATGCAAATAAGGAGAAGACAAATTTTTAGATNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTACGAAGCAGAAA CACTGTCACAAAAATCGTATATATGTTTTTAAAAAGGGACATGTTTTTTT ATAAGGGGGCAAATTAAATCCACATATGTTTTGAAAATAGGGCCGTTTTT TTAAAGGGGGCAAATTAAATCCACATATGTTTTGAAAATGGCACATGTTT TTAAAAAGGGGGCAAATTAAATCCACATATGTTTTGAAAATGGGACATGT TTTTAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTTTTTTCAAACAAACTTACAGATTTTGATAAA AGCTTTCGAATGCGTCGAAATAACGTCATCTATGACGTCATCGACGTAGC CGCTGCCGTCCTTTTAAGGTCTCGGACCGGAGTTTTTTTGCGATTTCGTA TGTAGGCCGACACCCTCAGGTCGACGGGCTACAATTCCGCCGAGAAAAGT AGGACGGAAAATGTAATCACATGGTCGAAAAGCGGTTTTCTGCTGTTTTC CGATGTATTTATCGGTATTGTCCGTTGTCCCTTTATTTTGGGTAGAAACC ATAGTAAAATGTAAATTTGGCATCCGAAAATTATCATTTTTTTACACTTT TTTGATCGAACCTGCTCGGAAAAAACGAGTTTTCCTGGGGTCACGGCATA TATGCTGAGAAAGCTTAGTAAATGGTGTCTCTGAAAAATGAAAAAAATAA AAAAGTCATGTGATAACTTTTTCGCAATCTCCGATGACGCAAATTCGGTG AAAATGCATTAAAAACGATGCTATTTGGGTCATCAGGCGAGAAAACCGCA TCACCGTTCCCGCGGACTAATACAAAAAAGGCTTCGATAGCGAACCAACT GCACCGCGCCCAAAAATACTACAACTCACGGGCTTTTCAGAAGATTCAAA ATATTCATACACAGCTAAAACCATCACCAAGCAATCTCGGGCAGAAATCA GGGTGACGACCACGCACTTCCGGCAGATTACCGGGTCATGACCCAACCCC GGTCACAATTGAACTCCAACCCGGAACCTTAAGTCATTTCCGTTTGGAGT TTGAAATCGACCAGTTTGAAATCGACCAGTTTGAAATCGGCGTAACTGGA AAGCACCACTATCAAAATGGGGGGTAAATCGGAAACGATAGACCATTTTG AAAGCACCACTTTGCAAACCGGTGGGTTTCCTGGATTGGGGAATAAACTT ATACACGGTACAAAATGAAAATGGTGTATGTTTTTTTTTCGTCTCATATT CTCATTTTGGTTATTTTTAAGATGCATATTGTTTTAAAAGATATGACCCA TAAGAAAAACCATGTCCTATTTTCAAAACATATGTGGATTTAATTTGCCC CCTTTTTAAAAACATGTGCCATTTTCAAAACATATGTGGATTTAATTTGC CCCCTTTNGATATGATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCA CTACTTTTCGTCAGTGACTGTGAGCAAGATCAGTTGAACAGCAGGTTTAT AACCACGAACTATGAATTGATATGCAAATAAGGAGAAGACAAATTTTTAG ATAGTCCAATAGAAAGCGAATTAGACAACTCAAGACAAGGTTGAAGTAAA AGGGGACAATAGCTCCTATTGTTTTAATATAGGAGCTAATGCTGGTTTGC CCCCAAGGCTACATGTATGTCCCAAGTGCCAGACAGTTCCACCCTTAGCC CTCCTTTCCTGTTGAGGGTTGGATTGTATATCCTCTCATATATTGCCTCC TTTACTCCACGTTCGAACCAGCGGGGTTCGCGGTCAAGGATATCAGTGGA TTCGAGATTGAACGAGTGCCCCTGGTTGTGTTTTAGGTGGTGGAAAATGG CCGAGGAGTAGCGGTTAGCGCAATGTTCTTTGTACCTTTCATTAAGTGAT CGGCTGGTCTCTCCGATATAAGTGTTGTGGCAGTTGGGTTCTTCACATTT GAGTCTGTAGATGACATCGGCCTTGCTGCCTTTGCGGGGTCGGTCTTTAG GATGTACNTGAAGCTCTGGATCATGTCACCTATCTAAAAATCAAACCCAA ATCGGAACAACCCCCTGCTTTCTACGGCCTCCCCAAAATCCACAAACAAG ACGTCCCCCTACGGCCCATAGTTTCTGGTATAGGCTCAGTCACCTACGGG GTAGCAAGTTTTCTAGCGAAGATTTTGGGACCTTTAGTGGGGAAGTCTCA ACACCATGTACAGAACAGTGCAGATTTCGTAAACAAAATCAAAGACATCC AGTTAGACGAAGATGATATCATCACTTCGTATGATGTGTGCTCTCTTTTC ACCTGCATCCCCCCCAAAGAAGCGGTGTCAGTAGTCAGGGAAGCCTTAGA GGCTGACAACACACTAGCAGACAGAACCAAGTTATCTGTGGACCAAATAT GCAAGCTGCTAGACCTCTGCCTGGGGTGCACATACTTCACTTACAAAGGA CAATTCTTCCAACAACTGCACGGCTGTGCTATGGGTTCACCAGTTTCGCC CATCGTGGTAAACCTGTACATGGAGAAATTTGAGAACAAAGCCCTCAGTA CTTTCAAGGACACTCCCCCGGCCAACTGGTTCCGTTATGTAGATGACACT TGGTGCAGACTAAAGAAGAGAGTAGCTGATGATTTCTTTGAACATATCAA CCAGATAGATGACAACATCAAGTTCACACAGGAGTCGAGTCAAGATAATA TGCTCCCTTTCCTAGACACCAAAACCATCATAGAGAAGGATGGTCGCCTC CAGTTCGAAGTATACAGGAAGCCGACCCATACCGATCAGTATCTGGCCTT TGATTCTCACCACCCTTTGGAACACAAACTGGCAGTTATAAAAACTCTCT TTCATCGGGCAGACAACATCATCACCTCAGACACGGCCAAAACAGACGAA CATAGACACCTCCGAGGTGCCCTGGGCAAATGTGGCTACCAAAGATGGAC TTTCAACAAAGCCCTCAAACCGTCTGACCAGTCCAAGAAAACGCCTAAGT GTACACCGTTGACCAACAGAAACAAGGCCAACATCACTATTCCATATGTA CAAGGAGTGTCCGAAAAACTCCGACGGATCTTCCAAAACTTCAACATTGC CACCAACTTCAAACCTCAATCAACTCTCAGACAAAGACTGGTACATCCTA AAGACCGACCCCGCAAAGGCAGCAAGGCCGATGTCATCTACAGACTCAAA TGTGAAGAACCCAACTGCAACAACACTTATATCGGAGAGACCAGCCGATC ACTTAATGAAAGGTACAAAGAACATTGCGCTAACCGCTACTCCTCGGCCA TTTTCCACCACCTAAAACACAACCAGGGGCACTCGTTCAATCTCGAATCC ACTGATATCCTTGACCGCGAACCCCGCTGGTTCGAACGTGGAGTAAGGGA GGCAATATATGAGAGGATATACAATCCAACCCTCAACAGGAAAGGAGGGC TAAGGGTGGAACTGTCTGGCACTTGGGACATAGCCTTGGGGGCAAACCAG CTTTAGCTCCTATATTAAAACAATAGGAGCTATTGTCCCCTTTTACTTCA ACCTTGTCTTGAGTTGTCTAATTCGCTTTCTATTGGACTATCTAAAAATT TGTCTTCTCCTTATTTGCATATCAATTCATAGTTCGTGGTTATAAACCTG CTGTTCAACTGATCTTGCTCACAGTCACTGACGAAAAGTAGTGGATGCTA CTTGAAACGTCTGACCGTTTCCAAAATCATATCCAGTTGTTTGAGTAATT GCTTTTTGGCGTATCTTATTACCTGGATGTCTAATCTTCATCGACGTGCT AACTATTGTGGTTGAAATTGAAATAGATGTCCTAATTCACAAACCTACCT TTTTTAGCATGTGACACATTTGTGTCCTTCTTAAGAATTTGGGCCTAATG CAGTGTGTGCATTCCTTTCCAATAGGTCTTCTGGTAAGGGTTCTAAGAAG GGAGAGAAGTGACTCTCTACACAACCATCCTTGAAATCAACCGTTCCGGT ATTCATTACATGCCTGTAAAGGACCATTGTCTCAAACAAACAGTCATTCC ATATTGGTGTTGTGTTATAAATCATATAGACAGAGTATGTAAGCTGAGAA AGTGTATTGTATGTACAACAAGATGTCAAACAAACATGGACTGCTTTTAA TCAATGTAATTCTAATGTTCATATAACTCAGTGGATGTACACCTTTGTAA AGATTGGAAGTCCTTGTCAACTTTGTTATGTTATGAGTGTGTTGAGCATA TCATTAGATGTATGATGCTTTTATCAGGNATGTTATGAGTGTGTTGAGCA TATCATTAAATGTATGATGCTTTTATCAGGTAATTGAGGGAATTTATGAT GTATGTATATTTATTACAAATACTTTCAGGCATCACCAATATGTTTTCTT GTCTTCAAACTTACACCAAATGCTCAGCCTACACATTCTGAATATAATGT AATGGCTAAAACGGTCTATCACTACACAGAATTTACAGTTTCCAGAAATA TTGTTCCAGTAATATTGAAAAAAGATAAAGGGTACAGAAGTGGAAACTTT TTTAGATAAGCAGCATGACATATTTCACAGCAAAGTTTCAAAATAAAAAG TTACCGCTAAAATGTTTCCCCTCAACCTCTAGAAATAGTATTGGTGTTTC CTGTCATGATTATTGCTATGAATTATTGTATTATGTATGTATTATGGTGT AACACTTATGGTGCTGTTTCTTTTTACTGTGCAATGTGGGATCTATTGGT GTCACACTGGCAGCTTGTATTATATTGTTTCAAAGAAACGGTTATGTGTA AAAGTTGCTTTACCACTGGAGAGTACATGTTCTATTTCTAACATAATGTA TCAATTTTGCATATTGTGATCACTGATTTTTAGTACTACCTACCTAGTAC TACGGTTACTCTAATGTTTGGTACTTTTTATTGACTTTGTTATGAGATTC TACTCATTCTTTCTGTTGTTTTTTGTCACTCAGAAGGACTAGCTTTTTGT TTCCCGGAGGTTTCAGTTTAAGTGTATTGCTTGACATATAGTTATACCAT GTATGGTCCACATGTAGTTGAGTAAAGGCACAACAGCTGGTATATAGAAT GTAAAAGTTGTCCGTAGAAGATCCAATTACAAGAAGTAGAAGAATGATCC AGCATTATTGTGGGGTTGGTCATATTTATTGTTCTGCAAATAAAGGCTAC AATGAAATCGTGAACGGCATTTATATTTCTCAATTTTTACATGTGGTATA GTTGTTCAGGAACTTGTTGCAGTTTCAGAAGAGTAATTGAAACAACTGCT ACAGTTTCTAAAATCTGCCTTACATAATAACAAGGAAAGTGTTGAACTTG AAAAGAAAATGATGATGTGGAATATACCTTAGCCATTTGCACTTGCATGA GGACTGAAGGTACAAACACTTGAGATTCTATTTGAAAATGCCTGGCCACT TCTTTTGCTAGTTTGTCAAATCTAATACTAGTACATAGATCTTCCATAGC TTACTTTTCAGGCTGGTCCAGTCATATATGTACATGTAGCTAACAAGTTT TATCTAAATATAGCCACTACAGTACATGTTTGTAGTTCAAACTAATTGTG AAGTGTCTTTTGGTTATGTGTTGCTGTACTCCTTGCAGCTACAGTCTGGC TCAACGTTAACGGGGGTTGATGTGCACAGAACCATCAGTAGCCTTTTCTT CCTCGAAATCTGTTCCTGTTGTCAACCTGGAATGATGAAAAAATAACATA TGTATGTACATTATATTGATTTATATAACATAGTTTGGGGAAGTAAATCT CATGTCTAAAACAACGCTTATCTATAGTTTGACCTTATGAAAAAGTCCAT TTCAAGATAATAGAATGAAGATGCTACTTAAAATGGTTTGCCAAGTTTGG GATAGGGTAAGAACACTACACTAATCAGATATTGAATAGAATCAATTTTT CTCACTGC

Coding sequence (CDS) from alignment at Sc0000037:488810..498717+

>Blg02860.5 ID=Blg02860.5|Name=Blg02860.5|organism=Branchiostoma lanceolatum|type=CDS|length=402bp|location=Sequence derived from alignment at Sc0000037:488810..498717+ (Branchiostoma lanceolatum)
ATGACGGAAGGACGAGTTGAAGATGGAATGACAAACGTTCCTCTCTCTTC
AGACGATAGTGAAGGTGAGGTACCAGGAGGTGTGTGGAAGCAAAGCTCTA
CAGATGCTGTAGGGACCAGCACAGGGACTAACAGCACCACCAGTCTGTGT
GATGAAACATCTGATGAGGCTGAGGAGAAAGCGCGACTCATCTGTCAAGT
GTTGGAGTTACAGAATACGCTGGATGACTTGTCCCAGAGAGTGGATGCCG
TTAAGGAGGAAAACCTGAAGCTGAAGTCAGAGAACCAGGTCCTGGGGCAG
TACATCGAGAACCTCATGTCAGCTTCCTCTGTCTTCCAGACAACGTCCCC
CAAGAGCAAGAAAAAGTCTTCTGGTAAGGGTTCTAAGAAGGGAGAGAAGT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02860.5Blg02860.5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02860.5-exon-Sc0000037-1570713199:488810..489029Blg02860.5-exon-Sc0000037-1570713199:488810..489029Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:489145..489228Blg02860.5-exon-Sc0000037-1570713199:489145..489228Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:490702..490779Blg02860.5-exon-Sc0000037-1570713199:490702..490779Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:491080..491163Blg02860.5-exon-Sc0000037-1570713199:491080..491163Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:491556..491694Blg02860.5-exon-Sc0000037-1570713199:491556..491694Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:496685..496997Blg02860.5-exon-Sc0000037-1570713199:496685..496997Branchiostoma lanceolatumexon
Blg02860.5-exon-Sc0000037-1570713199:497049..498717Blg02860.5-exon-Sc0000037-1570713199:497049..498717Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:488810..498717 +
Properties
Property NameValue
GeneIDBlg02860