Blg02860.2 (mRNA) - B. lanceolatum

Overview
NameBlg02860.2
Unique NameBlg02860.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:488814..498717+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02860.2 ID=Blg02860.2|Name=Blg02860.2|organism=Branchiostoma lanceolatum|type=mRNA|length=9904bp|location=Sequence derived from alignment at Sc0000037:488814..498717+ (Branchiostoma lanceolatum)
ATTTCTTCACCATAATATTTTTCTACTTTCTCTATCAGTCGCTGTATGCA TTAGATTTTTTTGACGTAATAAAACATATCTCTGACCATATCATTCTATG CATCAGTTATTTCACTAAAAGACCTAAATGTTTATGGTGAAAGAAAATAA TGATCTCCCGTAGCTGTAATGGACGAGCCCTTTTTATGTTGAGTTGGCTG TGACTGCAGGAAAAAGGTAGGTGTATCTGTGAATAAAAATGCGAATTTAA AGATTTTCTGGTGGTGATTGTCGGGCTTTGTGCCAGTTGTAGGATCCATG GCTTTCTCTAGAATTGTCTGTGTTTGTGCAGGTCCGGGAAACGACGGAAT CATGACGGAAGGACGAGTTGAAGATGGAATGACAAACGTTCCTCTCTCTT CAGACGATAGTGAAGGTACAAAAACAAAAATATTTGTTTCACTTTCCCTT TTCACAACGGTGAATGACAATTATCCTCTCATCTATATCGTTAGGAAATC AGGTAATTTCTTATAGGTATCTATTCCGGTATAAATGTATGATCTGATGA TAAATTCCATAGCCAGAAATCTGAGTAAGTCATGATTGACATTTAATCTC CAAGCAGATGTTGGTTGGAAAATTGTAATGTTTCTGACCAAGGACATTAT ATAATGTCCTTATATAATGTCCTTGTTCTGACCATCTTGGTTTCTCAGAA AAGGCACATGCCCAGCCATTCAGAAAACAGTACAATTTTCTGTCCCAACA TCTGCTTGGAGATAACACAAGCCTCATCCTTTCACTTTTTACGTCCAACT CAGTAGTAGAATCTCCTTGAAATTGAATGAATAACTAAGGATGAGCTATG GAATTGGAAATGTACATTTTGTATCTGCTGCACCAATACAATGACTGTAC CCATAGATACATAAATGATATGTTTTAGTTGGTATCAGGTCTTTTCCCCC CCAGGTCGATTCCCCCCCAGTTGTTTCCCCCCCAGGTCGATTCCCCCCCA GTTGTTTCCCCCCCAGGTCGATTCCCCCCCAGTCGTTTCCCCCTGTCTGT ACCTGACTAATGCATGGTAGTCGCTATGATTGCTAAAATGCACCATCTAC ATACAACGAATATACACACCTTTATTCTGGATGAAATCAGCAACATTATA CCATATATAATGTTATATATACTTTTCGAGCAGGTGCTGATCTGCGCCCC ATCATAACCTGACTGTGCAAGCCGGCGATTGTCAAGTCCGCCCGCTGCGC TTGACCAGGCCCACTCCGCCCGCTGTAGTCCCATGAATGTCACAATGATT TACAGGATTAGAAACTTACAGCATAACTGACACTGCTTTCGTGTCATTTT TCAGCGTATAGTAATCTGTTAGTAAGCATTTTTTTATTTATTTCTGACAG TACTGTTGATATATAAAGATGAGGCAGTCGGAATTAATGTACTAATCATA ATTTGGGACCGCCCGACATTTCTGAGTAACGGCAGGCGCAGTGGGCTTGG TCATGACAGGCGTGAGGACTTGGAAATCGCCGCGCCGCCCGCTAGCACAG GCGAGTTTAGCGGCACGCAGCTAAACTAGTAAAGTTTAGAACGTTATACA GTACTTATAGAATAATGTGAAAGTAAATTGTGCATCTAGTATATTTAGAA TCTAACGTGATAGTCACTAGCTAAACGTAACCTGGTTTACAGCTAGACAG GGGGGGAAACGACTGGGGGGGGGAATCGACCTGGGGGGGAAACGACTGGG GGGGAATCGACCTGGGGGGGAATCATCTTCACCAAGACGTTTCCCCCACT GGGGGGAATCGTCCTGAGGGGGAAAAATCTTGAAACCGTTTTAGTTCATG AACTCATGTGTATCTACCATGTTAATACATTTTAAAAGGTGAGGTACCAG GAGGTGTGTGGAAGCAAAGCTCTACAGATGCTGTAGGGACCAGCACAGGG ACTAACAGCACCACCAGTAAGTATGCTTTAACCCGGCCTCAGAGTGCCAA GTAAGCTTTCATCTTATTGAAAGCAAAAAAATGTGTGTGTAAGTAATGGT TTACCCCTCCACAAATGTGACATAAATTTGTAGATTGTTTTGTGTTGATG ATTTTGAGGTACCATCCTACTAGTAAGTAGCCTAGCTAACCACAAGTAAC ATATGGATGAAGGTGTTTATTGGAATGATGAAAACCATTAATAAGTGTTG CAATGTTTGGGCTGTTTTACACATCAGGTGTTTCATCTTGTTTATTTCAT CCTTTTGTCTTTTCAGGTCTGTGTGATGAAACATCTGATGAGGCTGAGGA GAAAGCGCGACTCATCTGTCAAGTGTTGGAGTTACAGAATACGCTGGATG GTGAATTAACATACTTTATCATCTAGAGCTTAATAGCGTTACTTTGCCCT TTTTCAANTAGAGCCTTAATAGTATTAATTTGCCCTTTTTCAAGCTAATG TTTGGATAAACTATCAAAAACAATGTTTCCCACAGAGGCACAGAGTGTGC AATGAATACCTTACTGTACACAAAAATGTATTCAAGTTAGGGTAGTTTGG TGTTCGCAGTTTTTAAATTGAAAGCACCGAAAAAAATTATTGTTCTGTCT TCTGCCCACCTACCACCTCGTTTCAACCGTGAACTAAAAGTAGAAACCAC CGCAAAATCTCCATTTTTTCCTTACCGCAAAATTAAATCATTGCAAACTT CAATGTATTTGCAGTACTCTAATGTTCATGTCTGTTTCTTAGACTTGTCC CAGAGAGTGGATGCCGTTAAGGAGGAAAACCTGAAGCTGAAGTCAGAGAA CCAGGTCCTGGGGCAGTACATCGAGAACCTCATGTCAGCTTCCTCTGTCT TCCAGACAACGTCCCCCAAGAGCAAGAAAAAGTAAGGGTGCTAAACAGGG CTTAGAATACCTACCTGCAATTTGCAGAACATTTTTCTAGATTGCATGAT AGACAACGTTTGATTTTGCAAGGTAGCAAATGTCAGGCTTGGTAGGTTTA GTCTACTAAATGAAAAACTTATATTGTAGGTAACAGAAAAAAGGATTTCA AGCCTGCTAACTATTGTACGCCAAAAAGCAATTACTCAAACAACTGGATA TGATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCACTACTTTTCGTC AGTGACTGTGAGCAAGATCAGTTGAACAGCAGGTTTATAACCACGAACTA TGAATTGATATGCAAATAAGGAGAAGACAAATTTTTAGATNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTACGAAGCAGAAACACT GTCACAAAAATCGTATATATGTTTTTAAAAAGGGACATGTTTTTTTATAA GGGGGCAAATTAAATCCACATATGTTTTGAAAATAGGGCCGTTTTTTTAA AGGGGGCAAATTAAATCCACATATGTTTTGAAAATGGCACATGTTTTTAA AAAGGGGGCAAATTAAATCCACATATGTTTTGAAAATGGGACATGTTTTT AAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTTTTTCAAACAAACTTACAGATTTTGATAAAAGCT TTCGAATGCGTCGAAATAACGTCATCTATGACGTCATCGACGTAGCCGCT GCCGTCCTTTTAAGGTCTCGGACCGGAGTTTTTTTGCGATTTCGTATGTA GGCCGACACCCTCAGGTCGACGGGCTACAATTCCGCCGAGAAAAGTAGGA CGGAAAATGTAATCACATGGTCGAAAAGCGGTTTTCTGCTGTTTTCCGAT GTATTTATCGGTATTGTCCGTTGTCCCTTTATTTTGGGTAGAAACCATAG TAAAATGTAAATTTGGCATCCGAAAATTATCATTTTTTTACACTTTTTTG ATCGAACCTGCTCGGAAAAAACGAGTTTTCCTGGGGTCACGGCATATATG CTGAGAAAGCTTAGTAAATGGTGTCTCTGAAAAATGAAAAAAATAAAAAA GTCATGTGATAACTTTTTCGCAATCTCCGATGACGCAAATTCGGTGAAAA TGCATTAAAAACGATGCTATTTGGGTCATCAGGCGAGAAAACCGCATCAC CGTTCCCGCGGACTAATACAAAAAAGGCTTCGATAGCGAACCAACTGCAC CGCGCCCAAAAATACTACAACTCACGGGCTTTTCAGAAGATTCAAAATAT TCATACACAGCTAAAACCATCACCAAGCAATCTCGGGCAGAAATCAGGGT GACGACCACGCACTTCCGGCAGATTACCGGGTCATGACCCAACCCCGGTC ACAATTGAACTCCAACCCGGAACCTTAAGTCATTTCCGTTTGGAGTTTGA AATCGACCAGTTTGAAATCGACCAGTTTGAAATCGGCGTAACTGGAAAGC ACCACTATCAAAATGGGGGGTAAATCGGAAACGATAGACCATTTTGAAAG CACCACTTTGCAAACCGGTGGGTTTCCTGGATTGGGGAATAAACTTATAC ACGGTACAAAATGAAAATGGTGTATGTTTTTTTTTCGTCTCATATTCTCA TTTTGGTTATTTTTAAGATGCATATTGTTTTAAAAGATATGACCCATAAG AAAAACCATGTCCTATTTTCAAAACATATGTGGATTTAATTTGCCCCCTT TTTAAAAACATGTGCCATTTTCAAAACATATGTGGATTTAATTTGCCCCC TTTNGATATGATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCACTAC TTTTCGTCAGTGACTGTGAGCAAGATCAGTTGAACAGCAGGTTTATAACC ACGAACTATGAATTGATATGCAAATAAGGAGAAGACAAATTTTTAGATAG TCCAATAGAAAGCGAATTAGACAACTCAAGACAAGGTTGAAGTAAAAGGG GACAATAGCTCCTATTGTTTTAATATAGGAGCTAATGCTGGTTTGCCCCC AAGGCTACATGTATGTCCCAAGTGCCAGACAGTTCCACCCTTAGCCCTCC TTTCCTGTTGAGGGTTGGATTGTATATCCTCTCATATATTGCCTCCTTTA CTCCACGTTCGAACCAGCGGGGTTCGCGGTCAAGGATATCAGTGGATTCG AGATTGAACGAGTGCCCCTGGTTGTGTTTTAGGTGGTGGAAAATGGCCGA GGAGTAGCGGTTAGCGCAATGTTCTTTGTACCTTTCATTAAGTGATCGGC TGGTCTCTCCGATATAAGTGTTGTGGCAGTTGGGTTCTTCACATTTGAGT CTGTAGATGACATCGGCCTTGCTGCCTTTGCGGGGTCGGTCTTTAGGATG TACNTGAAGCTCTGGATCATGTCACCTATCTAAAAATCAAACCCAAATCG GAACAACCCCCTGCTTTCTACGGCCTCCCCAAAATCCACAAACAAGACGT CCCCCTACGGCCCATAGTTTCTGGTATAGGCTCAGTCACCTACGGGGTAG CAAGTTTTCTAGCGAAGATTTTGGGACCTTTAGTGGGGAAGTCTCAACAC CATGTACAGAACAGTGCAGATTTCGTAAACAAAATCAAAGACATCCAGTT AGACGAAGATGATATCATCACTTCGTATGATGTGTGCTCTCTTTTCACCT GCATCCCCCCCAAAGAAGCGGTGTCAGTAGTCAGGGAAGCCTTAGAGGCT GACAACACACTAGCAGACAGAACCAAGTTATCTGTGGACCAAATATGCAA GCTGCTAGACCTCTGCCTGGGGTGCACATACTTCACTTACAAAGGACAAT TCTTCCAACAACTGCACGGCTGTGCTATGGGTTCACCAGTTTCGCCCATC GTGGTAAACCTGTACATGGAGAAATTTGAGAACAAAGCCCTCAGTACTTT CAAGGACACTCCCCCGGCCAACTGGTTCCGTTATGTAGATGACACTTGGT GCAGACTAAAGAAGAGAGTAGCTGATGATTTCTTTGAACATATCAACCAG ATAGATGACAACATCAAGTTCACACAGGAGTCGAGTCAAGATAATATGCT CCCTTTCCTAGACACCAAAACCATCATAGAGAAGGATGGTCGCCTCCAGT TCGAAGTATACAGGAAGCCGACCCATACCGATCAGTATCTGGCCTTTGAT TCTCACCACCCTTTGGAACACAAACTGGCAGTTATAAAAACTCTCTTTCA TCGGGCAGACAACATCATCACCTCAGACACGGCCAAAACAGACGAACATA GACACCTCCGAGGTGCCCTGGGCAAATGTGGCTACCAAAGATGGACTTTC AACAAAGCCCTCAAACCGTCTGACCAGTCCAAGAAAACGCCTAAGTGTAC ACCGTTGACCAACAGAAACAAGGCCAACATCACTATTCCATATGTACAAG GAGTGTCCGAAAAACTCCGACGGATCTTCCAAAACTTCAACATTGCCACC AACTTCAAACCTCAATCAACTCTCAGACAAAGACTGGTACATCCTAAAGA CCGACCCCGCAAAGGCAGCAAGGCCGATGTCATCTACAGACTCAAATGTG AAGAACCCAACTGCAACAACACTTATATCGGAGAGACCAGCCGATCACTT AATGAAAGGTACAAAGAACATTGCGCTAACCGCTACTCCTCGGCCATTTT CCACCACCTAAAACACAACCAGGGGCACTCGTTCAATCTCGAATCCACTG ATATCCTTGACCGCGAACCCCGCTGGTTCGAACGTGGAGTAAGGGAGGCA ATATATGAGAGGATATACAATCCAACCCTCAACAGGAAAGGAGGGCTAAG GGTGGAACTGTCTGGCACTTGGGACATAGCCTTGGGGGCAAACCAGCTTT AGCTCCTATATTAAAACAATAGGAGCTATTGTCCCCTTTTACTTCAACCT TGTCTTGAGTTGTCTAATTCGCTTTCTATTGGACTATCTAAAAATTTGTC TTCTCCTTATTTGCATATCAATTCATAGTTCGTGGTTATAAACCTGCTGT TCAACTGATCTTGCTCACAGTCACTGACGAAAAGTAGTGGATGCTACTTG AAACGTCTGACCGTTTCCAAAATCATATCCAGTTGTTTGAGTAATTGCTT TTTGGCGTATCTTATTACCTGGATGTCTAATCTTCATCGACGTGCTAACT ATTGTGGTTGAAATTGAAATAGATGTCCTAATTCACAAACCTACCTTTTT TAGCATGTGACACATTTGTGTCCTTCTTAAGAATTTGGGCCTAATGCAGT GTGTGCATTCCTTTCCAATAGGTCTTCTGGTAAGGGTTCTAAGAAGGGAG AGAAGTGACTCTCTACACAACCATCCTTGAAATCAACCGTTCCGGTATTC ATTACATGCCTGTAAAGGACCATTGTCTCAAACAAACAGTCATTCCATAT TGGTGTTGTGTTATAAATCATATAGACAGAGTATGTAAGCTGAGAAAGTG TATTGTATGTACAACAAGATGTCAAACAAACATGGACTGCTTTTAATCAA TGTAATTCTAATGTTCATATAACTCAGTGGATGTACACCTTTGTAAAGAT TGGAAGTCCTTGTCAACTTTGTTATGTTATGAGTGTGTTGAGCATATCAT TAGATGTATGATGCTTTTATCAGGNATGTTATGAGTGTGTTGAGCATATC ATTAAATGTATGATGCTTTTATCAGGTAATTGAGGGAATTTATGATGTAT GTATATTTATTACAAATACTTTCAGGCATCACCAATATGTTTTCTTGTCT TCAAACTTACACCAAATGCTCAGCCTACACATTCTGAATATAATGTAATG GCTAAAACGGTCTATCACTACACAGAATTTACAGTTTCCAGAAATATTGT TCCAGTAATATTGAAAAAAGATAAAGGGTACAGAAGTGGAAACTTTTTTA GATAAGCAGCATGACATATTTCACAGCAAAGTTTCAAAATAAAAAGTTAC CGCTAAAATGTTTCCCCTCAACCTCTAGAAATAGTATTGGTGTTTCCTGT CATGATTATTGCTATGAATTATTGTATTATGTATGTATTATGGTGTAACA CTTATGGTGCTGTTTCTTTTTACTGTGCAATGTGGGATCTATTGGTGTCA CACTGGCAGCTTGTATTATATTGTTTCAAAGAAACGGTTATGTGTAAAAG TTGCTTTACCACTGGAGAGTACATGTTCTATTTCTAACATAATGTATCAA TTTTGCATATTGTGATCACTGATTTTTAGTACTACCTACCTAGTACTACG GTTACTCTAATGTTTGGTACTTTTTATTGACTTTGTTATGAGATTCTACT CATTCTTTCTGTTGTTTTTTGTCACTCAGAAGGACTAGCTTTTTGTTTCC CGGAGGTTTCAGTTTAAGTGTATTGCTTGACATATAGTTATACCATGTAT GGTCCACATGTAGTTGAGTAAAGGCACAACAGCTGGTATATAGAATGTAA AAGTTGTCCGTAGAAGATCCAATTACAAGAAGTAGAAGAATGATCCAGCA TTATTGTGGGGTTGGTCATATTTATTGTTCTGCAAATAAAGGCTACAATG AAATCGTGAACGGCATTTATATTTCTCAATTTTTACATGTGGTATAGTTG TTCAGGAACTTGTTGCAGTTTCAGAAGAGTAATTGAAACAACTGCTACAG TTTCTAAAATCTGCCTTACATAATAACAAGGAAAGTGTTGAACTTGAAAA GAAAATGATGATGTGGAATATACCTTAGCCATTTGCACTTGCATGAGGAC TGAAGGTACAAACACTTGAGATTCTATTTGAAAATGCCTGGCCACTTCTT TTGCTAGTTTGTCAAATCTAATACTAGTACATAGATCTTCCATAGCTTAC TTTTCAGGCTGGTCCAGTCATATATGTACATGTAGCTAACAAGTTTTATC TAAATATAGCCACTACAGTACATGTTTGTAGTTCAAACTAATTGTGAAGT GTCTTTTGGTTATGTGTTGCTGTACTCCTTGCAGCTACAGTCTGGCTCAA CGTTAACGGGGGTTGATGTGCACAGAACCATCAGTAGCCTTTTCTTCCTC GAAATCTGTTCCTGTTGTCAACCTGGAATGATGAAAAAATAACATATGTA TGTACATTATATTGATTTATATAACATAGTTTGGGGAAGTAAATCTCATG TCTAAAACAACGCTTATCTATAGTTTGACCTTATGAAAAAGTCCATTTCA AGATAATAGAATGAAGATGCTACTTAAAATGGTTTGCCAAGTTTGGGATA GGGTAAGAACACTACACTAATCAGATATTGAATAGAATCAATTTTTCTCA CTGC

Coding sequence (CDS) from alignment at Sc0000037:488814..498717+

>Blg02860.2 ID=Blg02860.2|Name=Blg02860.2|organism=Branchiostoma lanceolatum|type=CDS|length=402bp|location=Sequence derived from alignment at Sc0000037:488814..498717+ (Branchiostoma lanceolatum)
ATGACGGAAGGACGAGTTGAAGATGGAATGACAAACGTTCCTCTCTCTTC
AGACGATAGTGAAGGTGAGGTACCAGGAGGTGTGTGGAAGCAAAGCTCTA
CAGATGCTGTAGGGACCAGCACAGGGACTAACAGCACCACCAGTCTGTGT
GATGAAACATCTGATGAGGCTGAGGAGAAAGCGCGACTCATCTGTCAAGT
GTTGGAGTTACAGAATACGCTGGATGACTTGTCCCAGAGAGTGGATGCCG
TTAAGGAGGAAAACCTGAAGCTGAAGTCAGAGAACCAGGTCCTGGGGCAG
TACATCGAGAACCTCATGTCAGCTTCCTCTGTCTTCCAGACAACGTCCCC
CAAGAGCAAGAAAAAGTCTTCTGGTAAGGGTTCTAAGAAGGGAGAGAAGT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02860.2Blg02860.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02860.2-exon-Sc0000037-1570713199:488814..489029Blg02860.2-exon-Sc0000037-1570713199:488814..489029Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:489145..489228Blg02860.2-exon-Sc0000037-1570713199:489145..489228Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:490702..490779Blg02860.2-exon-Sc0000037-1570713199:490702..490779Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:491080..491163Blg02860.2-exon-Sc0000037-1570713199:491080..491163Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:491556..491694Blg02860.2-exon-Sc0000037-1570713199:491556..491694Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:496685..497004Blg02860.2-exon-Sc0000037-1570713199:496685..497004Branchiostoma lanceolatumexon
Blg02860.2-exon-Sc0000037-1570713199:497058..498717Blg02860.2-exon-Sc0000037-1570713199:497058..498717Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:488814..498717 +
Properties
Property NameValue
GeneIDBlg02860