Blg02828.2 (mRNA) - B. lanceolatum

Overview
NameBlg02828.2
Unique NameBlg02828.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:437025..445562-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02828.2 ID=Blg02828.2|Name=Blg02828.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8538bp|location=Sequence derived from alignment at Sc0000037:437025..445562- (Branchiostoma lanceolatum)
CACAAATAAACACATCATATGTTGCTTGGCCAAGAATGATTTGAATGACA GCTGCAGATTCTATTACGTACCTTGAAAAAATTGAATTTCTATCAAACCT TTTGATACGCTGATTACCACAACACGTATTGGACATTGGTCAGGCCACAG TCCTCAGCCAGCTCGGTATACTGCAGGAGGGTTTTAATAACTCATGATCA GAGCAAAGTTCAAGGTTTGTGCCTAGGATCTGGCAAGATCAGAGTCTATA GTACTATTTTGTTTACTTCCTACGGGGTGACATGTTTGTTGTGCCAGGGT TTTATGATTTCTAGAACAAGATCACCGAAAAAAGATTATCTGTATCGTTA AACGTTCCTTCACAGCTGCAGGATATTTTCATTCATTGCAGTAATCTTAA TCATTGTCCTCTCTATATTTTTCTGAAATGTAACTAAGAAAAATCTTGAT GGGTCGACATGTAACAATTGCATCNGTCGACATGTAACAATTACATCATT GGTCTATCCACTTATATCCGTCGTAAGTAGATCTAGTAAGGACCAACTTT TACAATGTATTCGTGAATGTGCGTTATACTTGAAACGATGGTGACCTATA ATTTCGCCATGTCAATAGTGCAAAATAGTTATTGACAGGGGGTACACTGG AATCAGTGACCAGTACAATAGCTCAGGGAATGGAATGGTTGCCTTGCATT CAGAAGGCCGGGGGTTCAAACTATTCTCCAAGCAGAGGTTTCGATCGGGC GGCTAGTAGCGGCCGGGATTTTTAACGCTGCCCTCCCTTCAAAAATCCCG GTCACTACGAGCCCCCTGATCGAAACCTCTGCTTGGAGAATAGGTTCAAA CATCTGGCCGGTTAATTTTCTAACATCCATTCATGATCTGCTAACAACAA TAACAAACTAGTGGACATTAATCGGGTCATTGTCCTGAGCTAGGTCGGTA TACTGCAGTGGTACCTATGATCTGATAAGATCAGTTTACAGTGAGCTTTG TTTATTCACTACATGTTCAGTCTTGTGTCACGGGGTTTCTGAGGTCAGCT GCAGAACAACTTCTTAGTGAAGGACGGTGGGCGGAAAGACGGGCTCGAGT TAGGTGACTGGTGACAGTAGTCTCGTCGTGACAGGTAAGTGCAGTACGTT GTAACAAACTCTATATGTCCAGGTGCGTCGGGCGTTTCCAAACTGACCTG CCTCCATGAACGATACATGCCGAACTGGTGATATCAGCTGTTCAGTACAT TGGTCAATAAATGTCAAAATCGCTCATTGGTTGTGTTTATTGTTCACTGG ACAACCGCGTACAACCGTTTAAAACATTTCATCTTGCTCCATTTCTCAAA GTAGAAACTTAGGAAGAAAAAGGAAAGCAGGCGAAGCATAATGATTTTTC AAATAGCTAGCTTTGTCGCGGCTCGATCGCGTTTTTGGCAATGAATTTGA AGTCTGTTTTGGCATTATAGAACAGACTTGGAGTATTTTAAAGAGAGTGA ATCTGTTTACCTTTTGAAAAGCCGTTACTAACAACCAATGGCTGTCTTCA CAAGAAACAAGCCTTATAATTATGAAGAATAATAGAATGAAGGTCATTGT GATAAGCGAAAGGTTTACAGGTCACTGACCTGTTTCAATCATTCTACAAT TTACCTTGTCCCGTTTAGAGTTTCAAGGATGATTTGCTGCAAATAAAGTG TATACAACCAAGGGCACTTATGATATCCTTGACACAACTTGTCGCACAGG GAGTTGTCGTCTTGTCGCCGTAATGATGAACCAGTCGATTCAGAAGCCGT GTAGCAGCGCCGCATGCGGTGGGCCCGGGTACCGCACCCCACTGGATGCC ATGAAGGCACCAAGGGAGCTGCTCGCCTACCTTCCCTGCATTTACTGCAA CACAGGTAAGGCTAACAAGTCAAACTCGTTCAAAGTTCGTTATCAAACTG GAAAAAGTGATAACAAAGCGTGTGAAGGTATAGGAACAAGGGTAAACTTA CTATGCGTAAATTAGATTGTAAGTTTGCGTGGTCAACAAGTAATTTCGGT TTGCCGTTCCATCATATGTTCATGTATATATGCATGTTTTTCCATTACAA ATCAGTGCAAAGACTTATCCTATCATTGCAATTGCAATTGTAACTCCCTA AAATAACAGTAGCAAGTCCAAGATCCACATCTAGATCCGTCATGAAATTC AATCACTCGCTTCCACACCTGTCTAATATAATGAAAATATCATAGAATGG TCATCATTAAATCAGGCAAGATATTTATTGTACATGTTTGCCCCACAGGG CTAATCACAGGTTACATGTTAACAACTATATACATATTCATGAGTATATA AACATCTAGCATACTCTAGTACTTTCGACCTCCTCTCGTTTCTTGGTAAT TGTGTAAAGTTAAATGTAGGAGGCTGTATAGTTAATTAAAGTTGGTTTAT CGAAGGCTGTAAGAAATATGAATTTCTCTCCACTATTCAAATGACAGAAT AGTCTATTTGCCAGAAGCACTACAAAATAGAAAAGGTGACGTGTATGAAT ACTAGTACCAGTTAACTATACGAATTCCGTGCTCAACTTTGACAAGGGTC AGGAAAAATGATTGATTGTTTCAGTTGAACAGACTCACTGTATCGTAACT ATCTCTGTTCCTGACCAGGTATTGATAAACCGGACTACCTTGCAACTGTG GACGTAGATCCAGCTTCACCTACATACAGTAAGGTACGACAGCGACGACC GTGTCCCAACGGAGTAACAACGTTTAAGAATCACATTGTTGTTTCAACCC ACAAATTCAAAGTGCTACAATAATGAGTGAGGCCCTGTGTGGGGGAATTC TAGTAACGCTGAACTGTAAATTAGAGAGCACAGACAACGGTGAGTTGATT TGTTGTTGCGAAATAGCTAACAGGTTTTTGGAACGATCTTGAGCTCATTG GATTGCTTCGTTGTATTCATGGCGTTTCTGGCAGAAGTAGTAAATAGCTC GCTACGCCTCACTGTGAAATGCATAGAGACCCTCATGGGTGTAACGCCTC CCTCTCACTGGACCCGCGGCACGCTGGCGGCGTCGCTTCGTCCTAAACTG CATTTGTGTTACCCTTGACTGTATTATGGGAATATCATTAAAACCGTACA AGCATGACCAAAAAGACCAACAAAACACGCCAAGCTTAAAAAGATTCGTT TTTTTATCGATGAAATTCGTTGAGTGCTTTGTCAATTCGATCGGCCGCAG CGACGTCGCCAGCGTGCCGCGGGTGCAGTGAGAGGGGGGCTTTACGCGCG TTTTGCTTGGTTTGAAGGTGATCCACCGCTTGGAGATGCCTTACCTGAAG GACGAGCTCCACCACACGGGGTGGAACGCCTGCAGCTCGTGTTTTGACGA CCCCACCAAGTGTCGCAACCGCCTCATCTGCCCCGGGCTGACGTCAAGCC GCATATACGTCATCGATACGGGAACCAATCCAAGAGCCCCACAAATTCAC AAGGTGGCTTGCTTCAAGACTTTGATCATTTGAAATTTTCATAAGTAAAA GTATCAAAATAATCGTGTTTTTTTTTCTTAATCAACAAAACACAGTATAC TTACTTACTTACTTAGGCCCTATGCACCGGTTGGAGCATAGGCCACCGAT GATAGTCCTCCATTGCACTCGTCTTTGGCCCTTCTTTCTGAGGTCGTGCC AGCTATTGCTTATGCTTCTCATCTCCTCCTCTGGGTCCCTCCTCCATCTG TTCTCTGGCCGCCCGCTCTTCTGTTGACCCTGAGGTCAGGGTCTGGTATG TGATGCTGATAAAACACAATAGAGCTTCCCTAAAATCTAACATTTCCGAC AATTCTCTTCTACAGGTATTGGAGCCTAGTGAACTACTGGAGAAGGTGGG GCTTGCTAACCCCCACAACACACACTGTCTGGCCAGCGGGGAGGTCATGA TCAGTACTATAGGTGATCCCTGTGGAAATGGGAGAGGTACAGGAGTTTGT AGTTTGCTTTGTTTTCCCTTGTTTTACATTTGATATCAAATGTTAAATGA ATGGAAGTTCTGTACCGACAGTAGGAGCACATGCCCATAAGATCGTTTTG CTACAAGGCACCATTAGGAAATTTCGACTGTGCCATGGCGTTGCTTTGCA GCAAAACTTGTTGTTTGATTTCATAGTTTGAAACCAGGATGATCTATATC ATAACGACTACATGATTGTGTACTTTTTTATTGCTCATGGTGATGTTTTC TTTTCACTGTATTAGCAATAAAATATTGAAATCTTTTTTCAGTTCAGTAT CAGAACGCTTCAAAATCCGTTACCAATTGCAAAACATCAGCATGTTGCAG ACTAAGTTATCAAATAACCATGTAAGAAATTGTACAGCAAACAGAGATGA AAACTTAGTATTTCAATGCTTATTTGCTGTAGGAGGATTTATTTTGCTTG ACGGAGATACATTTGAGTTGAAGGGAACGTGGTGTGACGAGGAAGACGAC ACAGAGTTCGGGTACGACTTTTGGTACCAACCCAGACACAACGTCATGAT CAGTACCGAGTGGGGCCACCCCAAACTGTTCGAACATGGGTTCAACCCTC AACACTACAAAGATGGTAAGGCGGGACTTGTACTTTTTCTTACGTGCGTG CTATATCAATTAGTCTGCTATATACTCGCGTACATTTATAGTGTGAATCT AAGAACAGGAAGGGTAGTTTCTTTACTACTTCAAAATTGTTCAAATATCT ACCAAAGATTTGTAGTAGCTCTCGGAATGATGGTTATCTTCGGTTACGGC CCCTAACAGCGAGATTTGTATCTAATCGTAAAGGTGATCATGAAGTCTGC AATTTCCAACGCCAAGTTGATTTCTCTTTTTACTGTGTTCGAACGAGTGC AAAGACAGTTAAGCTTTGTTCCAGCGTAAAAAGTTTCGTGTAACAGCTTT CTTCTGGTTGGAATGAATGACCAATCACTGTGGGCACGTGATCTTACGGA CAGATGCCGGGCACATAGCACCAGCATTTGTTTGAAAAATTATTCATCTA TTAATCATACTGTGACACCAGCTATTCCTAAGTGGTATCTTTCTTGTGGC CAGGTCTGTACGGACAGAGCTTGCACGTGTGGGACTGGACAACGCACAGG CGCATCCAGGACATTGACCTCGGCCCAGAGGGCGCCATTCCACTGGAAGT CAGGTTCCTGCACAACCCGGACGAACCGCAAGGGTACGTGGGTTGTGCCC TGGGCAGCAGCGTCTTCAGGTTCCACAGAACTTCGGTAAGGACGGATCAT GGATGTATACCAGTATATAGATGTACGCTGATCATGGATGTATACTATAA ATATATTTCAGTAAGTCATATCAAAAGATAGAAATCAGAGAAGTAATTCG ATTTTGTAGAGCCCATTTGGCATACAGAAGATATTGGCAGAGAACGAAGT ACTGTAATATGATAGACAAATTTCATTCTAACATCTTCTCAACAAATTCC TTTAGACATTGCGTTCGCAAATTAATGATTTTATTCTCAGTTTTAACGTT TCTCTGCTGTCTCCACTGTAGAAGGGTGACTGGGCCACAGAGAAAGTGAT TGACGTAGCGAGTAAAAAGGTGGAGGGCTGGGCGTTACCCGAGATGCCAG GTGAGCAACTTTTTACCACAATAGACGTTCAACCGTATCCCCCAAGCAAA TCTTCCGGTGGTAAAATCGTTATGTCGGCCTAGACAGTGTCTATGAATGG TCTTGGCTGACATCTTGAACCATTCCGTCACCAGAAGATTTGCTTGGAGA TAACGTCAACCACGTCAAAAGACAGCTGAATTTTGTGCGACATCCACGGC TGTCCCAAGATCGAAAGAGGAATGAGACCGAGCCATTAAAAAAAAGAAAC AGTGAAGACTATCAAGCGTTTTACGTACCTTCGACAAGTTACACAAAAAC ATCAAGCGTTTCGTGCAGGCTGTCAGTAGAATGTTCTTCCATTTTTCCCA GGGATGATCACAGATATTCTGATCTCCATGGACGACCGGTTCCTATACTT CAGCAACTGGCTACACGGTGACGTCAGGCAGTATGACATCACTGACCGCA GGCAGCCGAAGCTAGTTGGACAGGTTAACATTTGATATATCTTCTTCACA ATATCCCTACAAAAATATTTAACTGAAATGATGAGGTGATTTGGGGTTTG AACGGCATCATAACTCCGTCTGTCAGAGGCTCGCCCATAGGGCAAGGCCA GATGTCATGTTTCTTCACAAACATAACCGCGAACCTAAGGGACTGTACGA TATTTAGCAGGTGGAGGGGGGAGTTACAGTCGTCTAGGGGATGGGGGTCG CTAGGACCTTTGATTCGGAAAAGCTGCCTAGGTTGTACTTCGCATTAGAC TTGAAGGAATGATGTGCTGCATTATCTCACATTTCTACAGCTGTTCCTTG GTGGAAGCATCTGCAAGGCCGGTCCTGTGCGCGTGACCCATGACCCGGAG CTGGACGAGCAGCCGGAGGCCCTGGTGCTGGACGGGCGGCGCAGGAAGGG CTCCGCCCCGCAGATGCTGCAGCTCAGTCTGGACGGGAAACGTCTGTACG TCACCACGTCCCTGTTCAGCAGCTGGGATAAACAGTTCTACCCGGACATG ATAAAGTAAGGCGTTTCTACAAACACAATTCTTCTGAACATGGGTATTGA CTTTAAAATTAGTGCAACTATGCATTGCTGCTTGAGTTAGTCGCGGCAAA TTCAGTTTTCCCGTGCCAATTTTTAAAGAAAACAAGGCTACTAGTATTAA GAGCAGTTTAAGAACATTTCATAACATGACTGATATCCAGGGGTTTTCGA TCTAAAGGATAAAATGTGGTCCTAAGAAATACACCTATACAAAGTCCCGA TCGACAGGGTTCGTATTCTAAGGATATTACTGTTGACATTTACATGATAT TATGGTTTTGTACAACTATTTGCTGAATTAGCATAATTTTGTAGAAAACA TGGCGATATTCACATAAAATATTGACTTCACCATCATTTATGCATTTCTC TCAACCAACCAGGGAGGGCTCTCTGATGTTTCAAATCGACGTGGACACAG AAGTCGGAGGCCTGTCCCGGAACCCTGACTTCCTGGTAGACTTCGGGCGG GAGCCGCACGGACCCGCCCTGGCACACGAGGTTCGCTACCCGGGCGGAGA CTGCAGCTCCGACATTTGGCTGTGAAGCTTATTAGTCTGAAATATGTACA CACTGACAAGACTTACGATTTTGATGTCGTAAGATTTTTAAGCAGGCTTT GACAGAACCAACCACCGATAAGAATCAAAGCTAAATTTTCTGTAACAGGA CAGCTGGATTGTGTACGACATGTTCATGACTAGCCCAAGAATGCGCTCAT TTGGCGTTTGTACGACGATGGTGGGATGAATGTGACCAGGCCCATATCAA GCAACGCCCATGCTCAGATAGAATCGAAATATCTATTCAGTAATGGATTT GGTGTTTAAAGCAAATCTTACCTCATAGAATAGATTATGTATTAACTGTA CTTTAGTAGTATTGGATGGAACGGTTTCTTGTTATAATGGAATGTTGTGA TTTTCAAATGGTTTATCGATCTGACTGAGGTCATGCAAAGAATTATTCTC ATAACTGTCGCAAATAATGTATTTCAAATAAGAAATATATGACTGGCAAA ATATATAAACAACTGTTGCAGTCCCAAACTAAGTGTTTCTTCAGAAATCA CCCCTTGGTCACGTATAACGTTGAACACATGAAAACGATAAGTTACAGCT GAACACAGATGGTACACGTGGAAGGTGAACTAGAGCTACTGTCCAGGCGT ACTGCCATATCCAGTCGCAGCCTTGTTGGTGAGCGAACCCTCCCTCGTCT CCTCCTCTGTAACTACCAGCATGATGTCCTCCGCCTCCTGACCAGCAGCA CCTCTGTTCGGCTTTCTCACAACGGTGGTGTCGTCCGTGACGTGGAAAGG CTCGAAACAGCAGCACTCTTTGTCCTCCTGAGAAACAAAACAAAACTGAT TAGTTCATGATGACCAGCGTCGATTCCATCTGTGAGCTTAGTATCTACGA CGTTTTAGTACTTCTTGGTTGTGCCCACACGAATAAAAAGTTGAGATGTC TAGAATTGCCATTTACAATATAGAAGACGGAAAAGGGTAATGCTTCGTAT CAGTCTGAAGTCACCCGTTTTAACTTTTTTTCATATGGAAGACCGAGATA TGACAGAATCTTTATCATAATCGGTTTTTCCTCTGGAAAAGTGAACAGTA TGGGAAAGAGAATGGAAGTTGAACACAAAGCGGTACCCGTGGACTAGCTC CCTGCTGTAGTATCATCTATGTTTGCACAGTTGTGTGGCCCATTGGCATT GGCTAATAAGGAAGCTAGATGTGTGCCGCCCAGTTTACACCACATGGTAT GAGAACTTTAACAAATGTAAAGTTGATTTCTATATTAACATTACTCACCA GGTACATGCCCATGATGTTGTCCGTCTTACAGTTCAGC

Coding sequence (CDS) from alignment at Sc0000037:437025..445562-

>Blg02828.2 ID=Blg02828.2|Name=Blg02828.2|organism=Branchiostoma lanceolatum|type=CDS|length=1449bp|location=Sequence derived from alignment at Sc0000037:437025..445562- (Branchiostoma lanceolatum)
ATGATGAACCAGTCGATTCAGAAGCCGTGTAGCAGCGCCGCATGCGGTGG
GCCCGGGTACCGCACCCCACTGGATGCCATGAAGGCACCAAGGGAGCTGC
TCGCCTACCTTCCCTGCATTTACTGCAACACAGGTATTGATAAACCGGAC
TACCTTGCAACTGTGGACGTAGATCCAGCTTCACCTACATACAGTAAGGT
GATCCACCGCTTGGAGATGCCTTACCTGAAGGACGAGCTCCACCACACGG
GGTGGAACGCCTGCAGCTCGTGTTTTGACGACCCCACCAAGTGTCGCAAC
CGCCTCATCTGCCCCGGGCTGACGTCAAGCCGCATATACGTCATCGATAC
GGGAACCAATCCAAGAGCCCCACAAATTCACAAGGTATTGGAGCCTAGTG
AACTACTGGAGAAGGTGGGGCTTGCTAACCCCCACAACACACACTGTCTG
GCCAGCGGGGAGGTCATGATCAGTACTATAGGTGATCCCTGTGGAAATGG
GAGAGGAGGATTTATTTTGCTTGACGGAGATACATTTGAGTTGAAGGGAA
CGTGGTGTGACGAGGAAGACGACACAGAGTTCGGGTACGACTTTTGGTAC
CAACCCAGACACAACGTCATGATCAGTACCGAGTGGGGCCACCCCAAACT
GTTCGAACATGGGTTCAACCCTCAACACTACAAAGATGGTCTGTACGGAC
AGAGCTTGCACGTGTGGGACTGGACAACGCACAGGCGCATCCAGGACATT
GACCTCGGCCCAGAGGGCGCCATTCCACTGGAAGTCAGGTTCCTGCACAA
CCCGGACGAACCGCAAGGGTACGTGGGTTGTGCCCTGGGCAGCAGCGTCT
TCAGGTTCCACAGAACTTCGAAGGGTGACTGGGCCACAGAGAAAGTGATT
GACGTAGCGAGTAAAAAGGTGGAGGGCTGGGCGTTACCCGAGATGCCAGG
GATGATCACAGATATTCTGATCTCCATGGACGACCGGTTCCTATACTTCA
GCAACTGGCTACACGGTGACGTCAGGCAGTATGACATCACTGACCGCAGG
CAGCCGAAGCTAGTTGGACAGCTGTTCCTTGGTGGAAGCATCTGCAAGGC
CGGTCCTGTGCGCGTGACCCATGACCCGGAGCTGGACGAGCAGCCGGAGG
CCCTGGTGCTGGACGGGCGGCGCAGGAAGGGCTCCGCCCCGCAGATGCTG
CAGCTCAGTCTGGACGGGAAACGTCTGTACGTCACCACGTCCCTGTTCAG
CAGCTGGGATAAACAGTTCTACCCGGACATGATAAAGGAGGGCTCTCTGA
TGTTTCAAATCGACGTGGACACAGAAGTCGGAGGCCTGTCCCGGAACCCT
GACTTCCTGGTAGACTTCGGGCGGGAGCCGCACGGACCCGCCCTGGCACA
CGAGGTTCGCTACCCGGGCGGAGACTGCAGCTCCGACATTTGGCTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02828.2Blg02828.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02828.2-exon-Sc0000037-1570713199:445349..445562Blg02828.2-exon-Sc0000037-1570713199:445349..445562Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:444429..444542Blg02828.2-exon-Sc0000037-1570713199:444429..444542Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:443658..443813Blg02828.2-exon-Sc0000037-1570713199:443658..443813Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:442830..442894Blg02828.2-exon-Sc0000037-1570713199:442830..442894Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:442060..442245Blg02828.2-exon-Sc0000037-1570713199:442060..442245Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:441577..441697Blg02828.2-exon-Sc0000037-1570713199:441577..441697Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:440948..441130Blg02828.2-exon-Sc0000037-1570713199:440948..441130Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:440278..440459Blg02828.2-exon-Sc0000037-1570713199:440278..440459Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:439913..439991Blg02828.2-exon-Sc0000037-1570713199:439913..439991Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:439440..439561Blg02828.2-exon-Sc0000037-1570713199:439440..439561Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:438908..439122Blg02828.2-exon-Sc0000037-1570713199:438908..439122Branchiostoma lanceolatumexon
Blg02828.2-exon-Sc0000037-1570713199:437025..438500Blg02828.2-exon-Sc0000037-1570713199:437025..438500Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:437025..445562 -
Properties
Property NameValue
GeneIDBlg02828