Blg02822.0 (mRNA) - B. lanceolatum

Overview
NameBlg02822.0
Unique NameBlg02822.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:714416..720087-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02822.0 ID=Blg02822.0|Name=Blg02822.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5672bp|location=Sequence derived from alignment at Sc0000037:714416..720087- (Branchiostoma lanceolatum)
CGTGTTACCGCCATGTGGTTAGTGACAGAAAAGTGTCCATGAGGTAAGTT TTGTGTGTTGTGCGGCAGTTTATATCCCTGAGTTTATCAAATTTAGCGAA TTTGAATGGATAAGAAGAAACATAAGTTACCAACTTATGTTTCGTTCGTA ATTTGAGAAGATAAAAAAGTCGTGGCCGTGGAGCTCGAGAAAATTATAGC GGTCGGAAGCGCCTGTCAAAGAAAAGGTCAACAAAGCCGAAGAACAAGTT GCAGAAGGATCCTTTCATATGCTTGTACTAGACACCCAAGACGAAGCCTA AAGACTACAGCTGAGTAATGTCTTCCATTGTATCACATTTTTCTAGATTA GAAGCTTCGGCCTGAGTAGCTACTCACCGTAAAGATCAACATGTAGGAAT TCCCGTTGGGTCGCTCATAGTAATTTTCTGTGGTCTCTCAGACTCTGTGG ACTAATGTCCTGTTTATATAGTTGCTAGTGATGCAGTACATTTGATAAGG GGTCATTTTAAGATTGGTGTGATTATGTACATCTTTAATAGATCTTAATA TATTTTCACAAGTGATGTTTATGAAGCCTTGCTTCTTATTTCAACCTCCT TCAATCTTGGTAAAACATATTGAAGAACGTGGTACTTTGTCAAAATTATG ATGGTATGCATATGAGACATGTGAGAGGAACTTCGTCTAGAATTTGTGAA GCTGTAGTTGATAGTACTTTCAGATTACTAGTACTCAATTGCTGACGTCA TAGGGAGCCATATAAGATCATATAACGTTATGCTTGTAGAATGCTTGTAG AATTTTTGGCAACACCTCAGGGGCAGATGCATTTGTTTTTCTAGTTACCT TCACCAAGTAGATTATGTTTTTGGTAGCTTTTGTATGTGGATATGTATGT TAGTATGTAACGTTGGGTAACATAAATTCGCGATTTTTCCGATAATGGTT GACTGAAATCAATCTAGCAGAACAATAAACCATCCTTTTTTTCTATTATT CTGTCAGTATCATGTACTATCTTTGCACTAATCATATATATGGTAGATTT TGTCTCTAGTCGTGCTGACACCATAATATTTCAACTTGAAACTACCGTCC GCCGCACGCACAATGACGGTGCTGTCGGACAGGGGTGAACATTATTTCGG GAGAGAAGATTCGTCTTGAATATCTTACCGCTAATTACATTTTATACAGC AGCTATTCGTTCCATCCTTGGCTTGAGGAGAGTGCTATGGATATAGACGT GTCCAAGTAAAAAAAATACACGAAAAAACGGCCGTACCGCACACGTCNCA TCAGGCCTTTGGTAACATCCCGTTTGTTGAGTCGGTAGAACGTCACTCAA AGTCGATCCCCACCGTCATGGCAACGTGTACATTATTCATGGGAAGTTAG CTGCATGCCGTAGCAATGGTTATACTACTANATACTACTATGTCCATGTG TTCCTTGTTGTGTTAGGAGCAAACTTTGAGGAAAATATTGTCTTCAGTCC ACTATCACACGCAGCATNCATTTAGACAAAAAAGTGTTCCTCACAAACCT TTGTCGTCTGCTTGACGACAGGATTCTAGGTAATAATATGTCGGCGGGAA AATACACGTGCCGTAGGTTGTAGCAACAAAGAGGAGTTTTGATGATTGAT CACACTTAGAATCCAGTTGCAGGTTAGCAAAAGAGATTGTAATAAGTTGT CTTGTAAATAATTGTGTTTAGCAGGAAGCGGATGTGACATTTGTCTTATA AACCAGCCGACAACAATGTTGTGTAATTCTCCCACGAAGCCCTCAGACTG TTCCAATAAGGGACGGAGAGTTTTTGACCTCGTCGCCTTCTAATGCATGG TTATCGAAGCTTTTCAGACAGTGTTCTGAATACATTAGTCTGTCAGGTTT GCATTTCTAGCGGTATTACTTATGTTGCATCTAGCACATATCCCTAAATA CCCCGTTTTCGAAAAATCACGAATTCAAGTACCCCGCGAATTTATGTTAC CCAACGTTATGTGTGGATGAACAGCATAACTCGAGAATTGCTGGGTGGAT TGTCTTGATATTTGGTATGTTGGTAGGTCTTTACGAGACCTGGAAATTAT TAGATTTTGGGCGCCTGGCAGCTTGTTACGGGACTTCAGCATAACTGCCC ATTTTGATATCTCGTATTTTGGACATGCTATGCCAATAGGGAATTTATTT GCATAATCAAAGAGAAACATTCATATGGCATCAGTCGTAAAGGTTAAAAT CTAGTGCAATATTATAGTGTCAATCAATATGGCTGACTTATCATTTGACT GTTTGCTTTTTCTTGTAGCAATGGTATCTGTGTCTGACTTTTGTGCAAAA CTTTGGTCACTGGACAAGAACAGACTGGTTCGAGGGAGAGACTACGACAT AGACCTGGAGGTGAGATTTGACAAAAAGGAATTTACCATATATAGAGGAT GAGGACACTTATTTGTCATTTTTTGATACCTAATGATAATGTGCCAAGTT TCAGTCATCTTCGTTTATGAAAAATTAGTCTACAAAAATCTTGAATGAAC ACACCGTCTATTCAGGACCCTGATTATACTTCTGCTGGCTGAGACCACTA TCACACCTCGCTCCAATTCCTAGCAGGTGCAAAAGAGAAACTGTCATGAG TTCAGAGATGAAGATAGGCAATTGGGGACCTTCAGCCTCCTGCAATTAGT GCATTTGGAGAAATCTTTATCTACTAGTAACAGCCCTCATGTGTATCTAC ATGTATATTAACTTAAGTAGTAAAAAGATTTTTTTTCAGTACTGGCCAAA ATGTTCCTTTCTTTGTTAATATTTTTCAGGCAGCTATTTTACAGATTTTA TTGTAAAAGTTTTTGACTGTTTAAAATTTACAATAAACTTATCCAGTAAC TGTTGCTCAAGTAACTTTTGTATTTGCATCTTATTACCTGGATGTCCAAC CTTCATCAATATTTTTTTCAGGATGATTTGCTGTTCTCATTTGTGGATGA GGCTAATCTGAAGAGCATCCCGACCTTTAAAGGTGAGAACTTTTGACAGT GAATCTCTGAGAAAACAACATTTGTTTTTACCCAGGAAAGATTGCTGGAA GATTTTTCATTTGAGGGGTAGGGGAGGTAAATATTCCTGTGGTGACTAGA AAACATGGATCTGTATTATGCTCTTCTGAAGAAATGCAAGATTATAATGT TGGGAGGTAGCTATAGCATACACAAAAAAACTATAATGGACAACTTCCTA CAAACAGGGAATTTCATTAACTCCTTGGCCAAATTAACCTCAGTCCATCT TCTTGACAGCTGATATTGTGACCTTATATTCATAATGTACCTTGCTGTTA TAACATTGTTACTGCATCCTCCCCAGCTCTTCGACGCCTGTTTCGCAAAT ACGATCACGTGTATGTCACGGCTCCACATGAGTCAGCTGAAGCTTGGACT TTCCTGAACCATTGCTTGGAGACACCCGTCATGCAAGAGACACACAAATT CCTGGCTCAGGGAGGTTCGATCATTACTAGGTTTTGTTCCTGATACTTCC AGTTGAAAATAACGAGTGGTTAACTGTAATTTATATTCAGTTAGTGCTGA TTCATTTCTAGTATGACATATTGCAGAATGGTGTGCCTATACTGTTATGT GTGTACATATGCAACTTAGTCAGCACAATCGCATCTCCGGCTCCAAGAAT AATCTACCAACTACTAAACAAATGTAATTACAGTACTAGTATTTTAACAG TGCTGATTCGCTCCTCTATAAAAAATGTTACTGAAGGATTGAAATTCTAC CACCTGCAGTGTTTCATCTTTTCTCTCTATCTACAGATTTCATGTCACAA TAGCCAGTGGTCCTTTTACCTCCCCCAGGTGTGGTGCCTGTTTCTCAGAA AGGCTTCAGGAACAGACTGTACACACTGTGGTTTGGGCCCTACTACAGGC CTAATACGGGCAGGTTAGTACTTTTAAACTTTCAAGTTCTGTCTCCTATC AATGTAGCAATCTTAGTAGTCATCACTAACCATTGCTCTCAATGTTATAT CTTGCTGCAATAAATGTGTTTGTATACGTACCTGCTTGGATTATATATTG TATATCATTGTTCAGTCACCAGGGCCCTTTGTAATAGCAGTTTGGCTAGT TGAGTGGCCCCCGCTGATAATGTCTTTAAACAGCCAAACAAATTAATCAA ATCAAAGCAGCTGTCATTTTGATGCTGTGGATCCCACTGCTTCCAATGTT CTTTTCCAATGTAAGAGTTAACAATCTAATTGTCGAAGTAAGAAATGAAC TGAAACTGAACTGAATTGAAGTGTGTCTGAATCTAGGACCTCGGATGATG GATTGGTGTGCCTTTGTGCAATCAGACAAGGGCATTCTTTTGCACAATAC GATATGAAGTGCAAGTCTCTTTTGATATCTGAACCTGATAGTTTGTTCAA GTATCAGGCCACATTGTATTCAATCTAAACAGATGTTCCACAGCGTTTGA GCACACGTTTGTAGGAGAGCCATGTCATGACTACGTGTACGGCTTCCACA ACTGGGTCCGTCTGTATGAACAGGAGCGGGATCATAGGCTGACCTATGAG GGCTGGGAGGTGAGGTAGCCTTTGTTTATTTGTAGTGCATTTTAAGGCCC CATATTGTTATATATTTGTGAAGTACAAATGTTTTCTAGAAACTGTCTTT TATATGTGTAATTTTTCAGAACAATTGTGTTTGTGTGTGTGTGTGTGTGT CTAATACACTGAAATAGAATTGAAATTGATAAAAATATTTTCATTATGAC GTAAAAGTGACTACATCTGGCCTTTTTCCGTTCTCTAGTTCAGTGTCAGT AACGATCACATCATTGGCATTGACATTGATTGGAATGGCTACATGAGCAA AACGGGAACGAGCTTCTTCGTCGGTACAAGCCCGGAGTTTGAGCTGGCCA TTTACACCACATGCTTTTTGGCTGGAGACGAAGAAACTCGAGTCCGCCTT GGAATCCCCTGGAATGTCACGATTGCGACTTACGATCTGGATGGTGAAAT TGCTGCCTGTTATCCGAAGGTTGAGGTCAGTAAGACCAGAAGTTTGATTA CCGTATTGGTAGTCGTCACCCAGAATATTAAAAAAGAAACACTCTGATTT GAAAAAATAAAGATCATTATTATGTTTAGGGAATGGCTGATCAATGTTTG CAGGTCACAGAGCATATATATGATATGGTAGATTTTCAGATGAAAAATAT GAGCGACCCTCTCACTCTCCCTCTGTCGATTTAAAATCAATTTTCTGGCG ATCAGTTAAGATAGCTGTTTGCCAATGTTTGTTGACTCTGCAACAGGGGT ATTCCAGTTTGATATAATTCTACGGACAAATTTTCCTACAGAATTTAGTC TAACTTTCCATTGTTTATCACTTGTTTAGGACGTGTTAATTGAAGAAGGC AGAGACTTCCTGGAATACCTTGATCAGCGGAACATTGGCCCGGAGCTGGG GAAGTACAAGCTGAAGAACATCTATGAGAATGGCTACACAAACACGTATG GCCAGTATGGACGGAGGCCTGGAACACCCTTCTCTCGGGTCCTTTATACC CTTGAGATGGAGGAGAAGGTCGATGTGTGGACCAACTATCACGGCGTAGA CATTGTCGAGTTTCTCGAGTAG

Coding sequence (CDS) from alignment at Sc0000037:714416..720087-

>Blg02822.0 ID=Blg02822.0|Name=Blg02822.0|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000037:714416..720087- (Branchiostoma lanceolatum)
ATGGTATCTGTGTCTGACTTTTGTGCAAAACTTTGGTCACTGGACAAGAA
CAGACTGGTTCGAGGGAGAGACTACGACATAGACCTGGAGGATGATTTGC
TGTTCTCATTTGTGGATGAGGCTAATCTGAAGAGCATCCCGACCTTTAAA
GCTCTTCGACGCCTGTTTCGCAAATACGATCACGTGTATGTCACGGCTCC
ACATGAGTCAGCTGAAGCTTGGACTTTCCTGAACCATTGCTTGGAGACAC
CCGTCATGCAAGAGACACACAAATTCCTGGCTCAGGGAGGTGTGGTGCCT
GTTTCTCAGAAAGGCTTCAGGAACAGACTGTACACACTGTGGTTTGGGCC
CTACTACAGGCCTAATACGGGCAGATGTTCCACAGCGTTTGAGCACACGT
TTGTAGGAGAGCCATGTCATGACTACGTGTACGGCTTCCACAACTGGGTC
CGTCTGTATGAACAGGAGCGGGATCATAGGCTGACCTATGAGGGCTGGGA
GTTCAGTGTCAGTAACGATCACATCATTGGCATTGACATTGATTGGAATG
GCTACATGAGCAAAACGGGAACGAGCTTCTTCGTCGGTACAAGCCCGGAG
TTTGAGCTGGCCATTTACACCACATGCTTTTTGGCTGGAGACGAAGAAAC
TCGAGTCCGCCTTGGAATCCCCTGGAATGTCACGATTGCGACTTACGATC
TGGATGGTGAAATTGCTGCCTGTTATCCGAAGGTTGAGGACGTGTTAATT
GAAGAAGGCAGAGACTTCCTGGAATACCTTGATCAGCGGAACATTGGCCC
GGAGCTGGGGAAGTACAAGCTGAAGAACATCTATGAGAATGGCTACACAA
ACACGTATGGCCAGTATGGACGGAGGCCTGGAACACCCTTCTCTCGGGTC
CTTTATACCCTTGAGATGGAGGAGAAGGTCGATGTGTGGACCAACTATCA
CGGCGTAGACATTGTCGAGTTTCTCGAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02822.0Blg02822.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02822.0-exon-Sc0000037-1570713199:720045..720087Blg02822.0-exon-Sc0000037-1570713199:720045..720087Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:719779..719927Blg02822.0-exon-Sc0000037-1570713199:719779..719927Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:717678..717769Blg02822.0-exon-Sc0000037-1570713199:717678..717769Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:717056..717116Blg02822.0-exon-Sc0000037-1570713199:717056..717116Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:716574..716711Blg02822.0-exon-Sc0000037-1570713199:716574..716711Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:716125..716209Blg02822.0-exon-Sc0000037-1570713199:716125..716209Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:715479..715605Blg02822.0-exon-Sc0000037-1570713199:715479..715605Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:715013..715249Blg02822.0-exon-Sc0000037-1570713199:715013..715249Branchiostoma lanceolatumexon
Blg02822.0-exon-Sc0000037-1570713199:714416..714658Blg02822.0-exon-Sc0000037-1570713199:714416..714658Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:714416..720087 -
Properties
Property NameValue
GeneIDBlg02822