Blg02821.7 (mRNA) - B. lanceolatum

Overview
NameBlg02821.7
Unique NameBlg02821.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:1665894..1671264-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02821.7 ID=Blg02821.7|Name=Blg02821.7|organism=Branchiostoma lanceolatum|type=mRNA|length=5371bp|location=Sequence derived from alignment at Sc0000037:1665894..1671264- (Branchiostoma lanceolatum)
AAATTCCGAGTGGGCTTATTGGTATAATAACTTTTAGTCATAACACTTTC ACCAGAGTATAGATAGATGAACCAAGAGAAGAAGCTGCTGACCTGTTCTG GTGCCACTGTCGCCTCCGCCATCGTCTGTCTTAGCTTTCTTCCGCGGAGG TCCCGAGTTCTTACTCTGCATGTTGAACAACATTAACATAATATCAAACT GTGCAGTAATGCTGTACCAATACTCTGAGCATGTTCCCCGATTAGATATG GGATTTAGAAAATTAACTTTATTGTTTAAAAACGGTCTCTTCAAGTAATC GACAAATTACGGTAGCAAAGATAAAGTGTTTGCAGTAAACTTGTCGGAAA CCAAACTGCCCTCCCCTTCATATTTTCCCTTTCAACCTCAATGTCAGCGT CTAGCAGTACGTTATAGCATCACTACAGTATTTGAGAGATGTTTTTAAAG CTTTGGACAACTGTAACTTTTACGCATTTTGCTATAAATCCGTTCAAAAT GAATTTTCATCACACATTATTCAGAACGCGTGGACCCACCTTCTTGTCCG CCATGTTTTCCCGCGAAATTTGCTTACAAAGATTTAAAACAGATCGCCTG ATTGGATGTTTACTCTTACCATCAGCCAATCCCCATACAGAACACAAAAG TCCTAGATCCCTGGTAACCTTCGCTCCCACAATGCCTTGTACTTCCTCTT TCTTTCCTCCATTGCTCTAGAGGTAAGCCTGAAACGGAATTACTACAAAA TCCTTCTAATATTTGTCCTATGTAGAATCATCAGCTCTCAAAAACATTTC ATACCAACGGAAAACATTATAATGGTGACGTGGATGTCGTTATTTTTTGT AAAATCGTGTTGGTATGAAAGCTTGGGGGCCGTGATTTCAACACTCGATC ACGGACCTGAGTTCCAACATGGCGACATGGACAACAAATTCCACTTTATT TTGTTCCCCTCACAATGTATGACACCTATAGATTTGGAAATATTAACCTC TGAAGTATCTTGCCAAGATAAAGCTGATTTTACGTACAAAGTAAAAGAAT TAACATCACGAATCAGTACGATAGCTTAAATCCAAATCCAGTACGATTTC TTCGTGGTAGAAAAAAATTATGGACAAGATGCACAAATGTTCATCCTTGC CGCATGTAATGTTTGCTTCAACAGGACAAAATGAAAGTATAGCTATGATA AGTGCTGTTATAGTGGTACTTTGACTGTATGAGTAATTTATGTTGTGGAG AAGTGTCAAGATTTCGACTTTGTAAGAGCACTTATAATTATATGACACGT ATGATCTGATTTATTTATTCAATAATTTGTGACAATGAGAAATTTTGTCC TATCATGTCCAATTCAGAGTTATGATTTCAGCTCTTTATTGTGCAAATGA TACTAAACAGTAATGAATTATGAGTAATGAAGTCTTACCACTACAGTCTT GGGGTAGCATTTATACTAATTATACCTTAATTATGTTGTATGTGGTGTAT TTGACTGTGATGTTGACTTGGCTATGTATTTTTTTGTAGCCATGAGGACC ATCAAATCTAGCGAGGAGGTGAAAATCCCTGAGGGGAGTAAGTATTCAAA CCATGGCTTATGTTTTGTTTTTAATCATACCTAGCCTAACAAATAGGCCT TCCTAAAGCAATTGTCAGTGCCGTGTGTATCGAAAGTTAAAGGAAGCCAA AAGGTATGGTCGGGAATCCTACTATGCTATGCTAAATATACCAAAAAGTA TAGTCTCCATCGAAATTACATTAGTCCGTCATAATTCACTGCTATATTAT TGATTTGAAAATCGCAGCATACGCCGCCGCCCGGTGACCTCGGTTGACCT CTACTGCCTCGTGACCCCGCGTGACGGCCGCGTGACGTCGCAGGTCTGAG CGTCCCACGGTGACCAACAACAACACTTGCTAGCTGCCCGCGTGCTGTCC GAACTCCGAAGACTTAGATCATGGAGATTGAAGAGAATCCAGTTGAAAAT GAAGACTTTGACGACTTTGATATCCGCCCTCCCACTGGATGCAAGACCTG TGACGTCACGCGGCCGTCACCCGGGGTCACGAGGCAGTAGAGGTCAACCG AGGTCACCGGGCGGCGGCGTATGCCGCGATTTTCAAATCAATAATATAGC GGTGAATTATGACGGACTAATGTAATTTCGATGGAGACTATACTTTCTGG TATATTTAGCATCGCATAGTAGGATTCCCGACCATGCCTTTTGGCTTCCT TTAATGTCTGTCACAGAGGAAAGTTAGAATGTTAATGCTGTATTAACCAT GCCACTTACTTAATGCATTAGACACCATTAGAACCTTGTGTAACAGTGAG AGGTGTTTGTTGTGAAGATATGTTTTTCTTTCTAGATAAGGCATGTCATA TTTACGTAAGAAATTTTGTGACATGAACAAGTACTGGTAAATACTGAATT TGTACTAAAGCATACTTACTTTCAAAGCTTTAGCCTTTAAGGTCTCATAT ATGTGAATGTGAACATGAAAAGAATGTAAGTTTTTGTAACAAGTTTTTTC ATTTCTTTGATTCCAGTCACCGTGAGTGTCAATGCCCGAATGGTCACCGT CAAGGGACCTAGGGGAACCCTGAAGAAAAGCTTCAAACATCTCAATGTAA GAATCACTTGCTCTTTTATTGTATAGCGCTAAAAAGTCAAGAGGTAACTT ATATAAATGTTGAAGCATCTGGCAGCCAAGATATAAAGTTAAAGACCTCG TGTATTACAGATAATTGAGATATTTTTACCCAATTGTACGAAGTTTTTGT TCTCTACAGTACTAACTGAATTTCCCCCCTTAGGTTGAGATGAAGATGCT TGGCAAGAAGAAGCTGCAGGTTAAGAAGTGGTTTGGCAACCGCAAGGAAC TGGCCTGTGTGCGGACTGTCTGCAGCCACGTCAACAACATGATCAAGGGT GTGACACTGGTGAGAACCTTTTCCGTAATCTTTGTCATAAATTTGTCGAT GAAGGTTAGACATCCAGGTAATTATTAAATAGGACACGCACAAAGAGTTT TAGTAGCTTTATCATTATTACCATATTGGTTATAGCTCTGACTTTATATG TCTCTAATGTGTGTCATCCTGCAGTAATTTTTTCTTCTGTGTCCATATGA AGCTGCATGCTGATAAGGCCAAGAAGGCATGAAAGTAGTAATTAGTTATG ATTTTGAGGAAACATTGCATGTCCACAAAGTTTTCATGTAGAACGATTTA GAAGTTGACAGAGACCAGAAAATCTTTCTTTCAAGCTCCCATTTATTTAG CTTCATTTTCTTTATTCTTAGTGTCTTTGAGAAACCATTATTTTATGCCA ACGTGATGGGTAGCTTTCCTCTTTTTTCTCATGTTCCCTTTATCCTCCCA GCAAACAGTTCCTCCACAAACGAATCAATAACATTTGTGTAAATCTGATA TCATTAGGGCTACCGCTACAAGATGAGGTCAGTGTATGCCCATTTCCCCA TCAACTGCACGGTGTCGGAGGGCAACTCCGTCCTGGACATCAGGAACTTC CTGGGTGAGAAGGTGATCCGCCGCGTGAGGATGAGTGAGGGCATCAAGGT CAGCCTGTCCGCGGCCATGAAGGACGAGCTGTACCTGGAAGGGAACGATC TGGAACAGGTGTCTCGCTCAGGTGTGTAGGAATTTTACTAACCTCTTTGT TTTGATATTGATATGCTTATTCTTAAGACCATGTTGATTTGATTTTTTGG ATGACACCGGTGCACGCATCAATTTTCGTCCATTTCAACAACAACAAATT TTCGGCCATACTATAAAGTGTACAAAGCAAAATACAAAATGAGCAATTAT ATACCATGTATTGCAAAAAAAATTACTAATGCTGTGGAATGCCAGTCAAA GAAAAGGTGAAAGAAGAAAAATGAAGAATCCATTATTTGATATACCTTGC TCAGTGTGTTAAGTCATTTGTTTAGCCTTCATCCTTCCAACTATCCTTTA GAATTTGAACAGGGTTGATAAGTGTCTATGGAGAGCTGATAGTGCTATTA CTGTTGTTCTTTGTTTTGTCAAGTGTTCAAATCATCTTGTGTTTTGATAT TTACTTATTTTCTCTGCCCAACAGCTGCCCTTGTCCAACAGAGCACAACT GTAAAGAACAAGGACATCCGCAAGTTCTTGGATGGAATCTACGTCTCAGA AAGGACCACCATCGTGGAGCCCGAAGACTAGACATTTCCACACATAGGAG AAACTATCGAATGAAATGTGAAATACCCGACCTTTGTTTCATCTCTTGTG TTGTTCTTTTAACACTGACAGTACCTTTTTAGTGCAAAGGGTCTCAACTT ATAAATAGAAAGCTTTAGGGGTCATAAGTGCTGTAATAACATGAAGATTG TTAACAACTGGTGGAAGAGTTTTTAATATTTTACACAGCAGTTCTGCCCT TCCTCCCGATATTGACTAAATGAGCCAATATCAGTCAGGATGGTTGGAAG TAGATAGATAAATTTGAAAGTGGTATGAACAGAAATTTTGTAATGTATAT CGCCCCCCCTCCCAAATTGATATTTCCTCAATTCTTTCACTCACCCACCC ACCCGAACTGTCTTAGAATTGCGTCCGAGAATGCCAGTAAAAGCTACTAG ATAATGACTCAAAATGATTATTTGTTTTTGAAACATTGCCCAGTATACAA GCCTGATATTGCAACAAAGCTCCAAGAAATTATACATCAGTAGTTTATTT GACAAAAGCTCAGAAAAGTACATATGGCCTGCTCTTTTAAAAGTAGTAAC TAATGATGACAATAATCATTAGATCTTTACATGAGGTTGATAATATATGA TTATTTTGTTTAGGGAGTGCTGTCACTAAAGTACAAAACACATGAAGCAG ATTGCTGACACATCTTCACACGAGAAGTAAAACCACACACGACCTTTGAT AAAGCAGTTATTAGTCAAGCTTCCAATACTTCATTTATGATAATTGAGAT TGATTACAGTATACAAATAGCATGTTGATCAATTCAAGTTCCATTGATTA AGATATAACATGGCACACATTTATTACACAAACACAACACCAGGAAGTCA ATAAATGCATTGTTTAATTTAAACATAAGAATAGCAAGTCAAAATACATG AGATTATTGGGAAATCAACCTTGCTTATGCCCTAGACGTCTTAACAGTCC CCAGGCAAAGCTAGTAACAAGCCTGTTATGTACAGTGGGACCCTTTGACG TCATACAAATAGATTATAATCTGAGCATAAATGTGTTATCTACTCTAGTC TACAATGTTATTTTCTTGCCCTGGCAGTGAAGATATTTCATAAACTCTCA AGGACAACTCAGAGTGAACAC

Coding sequence (CDS) from alignment at Sc0000037:1665894..1671264-

>Blg02821.7 ID=Blg02821.7|Name=Blg02821.7|organism=Branchiostoma lanceolatum|type=CDS|length=492bp|location=Sequence derived from alignment at Sc0000037:1665894..1671264- (Branchiostoma lanceolatum)
ATGTATTTTTTTGTAGCCATGAGGACCATCAAATCTAGCGAGGAGGTGAA
AATCCCTGAGGGGATCACCGTGAGTGTCAATGCCCGAATGGTCACCGTCA
AGGGACCTAGGGGAACCCTGAAGAAAAGCTTCAAACATCTCAATGTTGAG
ATGAAGATGCTTGGCAAGAAGAAGCTGCAGGTTAAGAAGTGGTTTGGCAA
CCGCAAGGAACTGGCCTGTGTGCGGACTGTCTGCAGCCACGTCAACAACA
TGATCAAGGGTGTGACACTGGGCTACCGCTACAAGATGAGGTCAGTGTAT
GCCCATTTCCCCATCAACTGCACGGTGTCGGAGGGCAACTCCGTCCTGGA
CATCAGGAACTTCCTGGGTGAGAAGGTGATCCGCCGCGTGAGGATGAGTG
AGGGCATCAAGGTCAGCCTGTCCGCGGCCATGAAGGACGAGCTGTACCTG
GAAGGGAACGATCTGGAACAGGTGTCTCGCTCAGGTGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02821.7Blg02821.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02821.7-exon-Sc0000037-1570713199:1671098..1671264Blg02821.7-exon-Sc0000037-1570713199:1671098..1671264Branchiostoma lanceolatumexon
Blg02821.7-exon-Sc0000037-1570713199:1669678..1670639Blg02821.7-exon-Sc0000037-1570713199:1669678..1670639Branchiostoma lanceolatumexon
Blg02821.7-exon-Sc0000037-1570713199:1668619..1668698Blg02821.7-exon-Sc0000037-1570713199:1668619..1668698Branchiostoma lanceolatumexon
Blg02821.7-exon-Sc0000037-1570713199:1668306..1668431Blg02821.7-exon-Sc0000037-1570713199:1668306..1668431Branchiostoma lanceolatumexon
Blg02821.7-exon-Sc0000037-1570713199:1665894..1667807Blg02821.7-exon-Sc0000037-1570713199:1665894..1667807Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:1665894..1671264 -
Properties
Property NameValue
GeneIDBlg02821