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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000493:29545..37489- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02272.10 ID=Blg02272.10|Name=Blg02272.10|organism=Branchiostoma lanceolatum|type=mRNA|length=7945bp|location=Sequence derived from alignment at Sc0000493:29545..37489- (Branchiostoma lanceolatum)
CGTGCCCTAGACACAGTGGATAAACAGTAACTGTAACTTATTCATGAGGA
AATGCTAGAATAGTCTTCTTTGTCCAGAGAAGACAATTCTTTGGATGACT
TATATTATTCAGGTGTACTCAATATGATCAACTGATACAATTTATGCAAA
TGAGGACCATAATTGCATAATCAATGAGAAGCATTTGCAATATGTTAGTC
GTAAAGGTTAACATCATTTGGCGAAGGTATGAGGTCGTGGGACTCTAGCT
TCGTATGTTGGGAGCAACCTGTAAAGGTATATCAGTACCTCCCCCCTCTT
TTCAATGCTAAATTCAAATAAAGAATAGTTAACAAAACCTGACGTCAAAA
GGAATACACTACCAAAATATTTTGTCTTGCTTTTCTAGTTTTTCTTGCTT
TTCTTAACTCGTGGACAAATTTTATCTTATGAAGAATGTTAAGAATGAAT
AAGAACGAAAAATTGAAGAATTTGTCTGATTCTTTTCATGGAAATTCTCA
CAATAAGAAACACTTTCCTAACTCTCTTAAGTTCAGAAAGTATTCCTCAA
CAACATTATCAAGCTCAGGAATTTTTAGAAATCCAAGACTAAATTTCTTG
CTCTAATTGACTTCAAGATTATTTTTCTTGTTATTTTAAGAAAATATTAG
GATTTTTCTCTCCCCTTTGTTGACTAATCTTACTTCAAGACAAATTTTCT
GAGAAGAAAATACTTAAGAAAAGAATTCTTAACTCGTCGACAAAATGTTT
CTCTTAAACACAGAAAGTTTTCTTCTTTGAATATTTCTTCTGTGTATTGG
AAGAAACAAGAAAAATAAGAAAAGGCATTTTTGGTAGTGTACGTACAAGA
TGTATAAGTGATGTTCTATAAAGTTTGTCCACATTCACGCTGAAAACTCA
GTGCTATTCAGATCGGTAAGTAAATACATGTATAAACTAAAAGAAACCTC
TATCCAAATCAGATGCTAGCTTTCATATAGCCGAATCGGCTCCTGTAATC
GGTCGGGTAGCAACCTGCTACTAGCTTCAGGTTGGTTAGCCAGTGACCAC
TAGTAGATATAACATAAGGTAATAACCTCAACGAAATAAAGCATTTCCAC
AAAAATTAAAGATTTTACATGTTATTCTTTCAGCAAACATGAGTGGTTAC
ATCCCTGTGGTGGATTTCTCAGCCTACAGCCTTGACAAGAAGAATGTGAA
CGACGCTGATTTGGAAACGCTGACGGAAGAACTCATGCAGGCTTTCACTA
CCGTGGGCTTTGTGTACCTGAAAAACGCAGGTATCCCAACAGCAGAGGTA
AGGCCAGGAGAGGTGCTACATTCGCACTACTTTTCGAGCTACTTTCTCAT
CAGGCATACGTGATTGCCACCTAAGTAGCTTGTACTACTGTATCATCAGG
TACATTGATTGTAGACCTATGGAAACTGTATCACTCCTAAGTAACATGTA
TCACTCCGCCTTTTAACTTTGCCTGGGTGCCATCTGATTACTACTAGGGC
TCCTATGCTCGCTACCAATCGATTTTTTCCAGGATAGCGAGGCCAGGCTA
CGTTTAACTGTCAGAGGCAAGAATAGGGATCCACAGTTCAGCTGTCGAAG
ATTTTTTTGTAGCTGCGTTCTTAACTAGTTATAAACTAGCATCGGGGCAT
TGGAGTTCAACATTGTGGGAACTGTTGGTCAGAGCACAACACTGGGAATA
TTTCTTGTGCTATTTCACATGTATTTATGGACTTCTGAGTATCATTATGC
TTCATGTTATGATTTGGTTCGGAAAAAACGAAGGTTAAGTTCCATGATGT
GCTAGCGGCTTTCTACGGTACTGCAGCAGTACTGAACATTGTTAGACTTA
AATGATGCAAAGCATAGCTCGATTTACATAATTAATGAGGAAATGTTCTA
TTCTACTTATTCAGGTAAATAACGTCTTTGACGTATACGATGAATTCTGC
TTTCAACCTGAAGCGGTGAAGGAGAAATACTCCCGGCCGGTGGACAAGAC
AGCTGAGCGGCACGGCTGGATGGCTCTGGAGAGAGAAATGTGAATATTTT
TTTCAGATAGACAATCTGTCTGAGATCATTTCTAAACACATTTTTTTCCG
TTTTGTTTTGTATTGCACGGATTTCTAGGGAATATCTCACTAGACTGTGC
CAAATAGATTGCGAGATGCATTCGCAAAATGGCGCAAGCCGTGTTAATCG
GCGCCAATCGGGGGCCACTTTGTCACCTGAGAATTTTTTTTTTAATATTT
TTTTGAATTGCAATTGTTAAAACGCACAATCATTAACATCTCTTTTTTGG
CTGAATCCTGATCATAGTACAATGCTTTTTACTTCAGTGGCTACACTGCG
ATTTCCAATAATCTTGTATCTGATTTGGAGCAAAACATTTGATATTCCGT
GCGCGGTCATTTTGTTACGTATTTTACGCGTGCATCGCCTGCCCGTGCTG
TGTGACTGCAAGGAATTAGAAAAACTGGCAAAATTTGCAAAGTTGGCACA
ATTTCCTATATTTCAATGTGACGCAGTCCAGTGAAATACCCGTTGTGTAA
AGTCATAACGGCGACTTGCTTTTAAAGTAATAGCAAATTGACGTCATTTT
AGGGACGGTCGTAGTCTCTACCATGCTCCATAGGTCTTCTGAAAAAATAG
TAGAAATTTGCCAAATAGACAGATCACATATCAGAGGATATGACCAGCTC
ACTCTTCTGGTATGCTATCTGTCTATTTGGCCAATTTCTACTATTTTTCC
AGCGACCTATGGAGCATGGTAGAGGCTAAGGCGGCCGTGGATGCGGCGCA
CAAATAAACTGACTGTGTCTTGATAGGTCCTAAGTTCTCGATCTGTCACG
TACTCATAGTCTGGCCGAAATTATGTGGCAAAAGAAAAATCGATAGACGA
AATATGACTGTCTAGGGGTTTTCTTTTATATGTTTTGTGGAGAACAGTGG
TTTTAGATTTTACAAGCTTTCGTTTCCTCCCATCGTTTCTATCTGTAGGT
TGTCTCTGGTGGGAAGAGACAAACCTGCCCCTGGTGACTTAAAGGAATGC
TTCAACATTCATCCACCTCTTACTGAAGGGCAGGTACGTTTCCTTCTCAA
TTGCTAGGGGCACAAAAGGACGGAGTACGTCAAACAAGGCTCTAGAAAAA
GTAGACGTACATCAATAAGAAGGTTCACGGTTCTAAGTACGAATGTGCAG
CGAAATGCACTGTGGGTAATATGTCAAAGGTGAAGACCCCCTAAGACATA
AACAAAACACGCTTGGACATTGTTATGCAAATCGCGACACTGGTCGAGAC
AAGAATTGTTTACAATTACTCACCTTTGACATATTACCCACAATGCATTT
CGCTGCGCATGCGTACCTGGAATGCTGAACCTTCTTATTGGCCTCCTCCA
CACCCACTGCTGGTAAAAGTTTGGCTACCAGGGCGGGGTTGCCAAGCTAT
TGAAAACTGATGTAATTGTCTTCGTGCGGACACAAAATCTTCTGTGACAA
ATCTACTGTTTCCCTTCCTCGCCAGACCTGGCCGGAGGAAGTCCCCGAGT
TTGAGCCAGTGATGATGGATTTCTATAACAAGTGTCACGTGATCGCCATA
CGCCTGCTGAGGATCATAGCCAGGGGACTGGGCCTCGAGGTAACGTTAAT
GTATTTTGTATGTCAAGCTGTTTGTATCCAGTTTCAGCAACTCTTTATCG
ATGAATATGGTGGGTTAGTTAACTCACTCATGATTACTCTAACACGCGTA
CACACCGAGTTGATAGATCCTCATTGCACATACTCTGCCAGCCACCCATC
CACTTATTTACTAACTTAGTATCTCACTAACTAACCAATAAACAAACTTA
CTAAACTCGCTTAACTTACAGACACGCTCGAGGTAATAGGAGAGTCACCT
GTGTCGAGTGATATACGATTCTACTGCAAGGACGTTCACGATTCCAAATG
CACAAGTCATGCGAAAGGTCAGAGGTAAAGGCCCCTGTTCTCGTCTTGAC
CATGCTTTATACACTTCTAGACAATATCGAACGTGTTTTGTTTATGTCTC
TGGGGCATTCACCTTTGACCTTGGGTATACGCACTTGTGATCGCGAGCGT
CCTTATTCTTTTAGAATGGGTTTGTCATTTTAGGATGTTGCCACGCTGAA
CGATTGTTATATTTTCATGATCGTAGGATGTAGACGGTTTCTTGGGAAAC
TTCCAGTATGTCGGGAAGGGTCGTAACGGCACCAACCTGCGAACCCTCCG
CTACCCTCCGGTTCCTGACGTCATCAAGCAGGACCAGGTCAGGTGTGGAG
AACACACGGACTTCGACTGTGTGACCCTGGTGTTCCAGGATAACCCTGGA
TTGGAGGTAGATTTGCCAGCAGAGACAGCTTATTTTACAACGTTTACTCT
AACGTGTGGTTTCTGTTTAGGTCTTATTCGTTAACGCACACTTAGGCGCT
TCTTGCGTAGCTGTAATGCGTTATTATGGCCTGGTCACCAGTGACTATAT
GCCAATTCAAGCCGCTGAATAAAAACGCTGATCATTGACGGTGGCGTAGT
GTGACGTAATGGTTAGAACATTCGGCTGTCAAACAGGGGACCCGGGTTCG
ATCACATGTCTGGACATGCACCCCGACGTTGTGCCCTTGGGATAGGCACT
TAACACAAATTTCGTCACTTCAGGTGAAAATGAGTACCTAGCCTAGGACG
TCCTTCGGATAGGACGTTAAATGGAGGACCCATGTATGGCGAGCCACACT
CCACGCACGTTAAAGAACCCACCACACCTTTCGAAAAAGAGTAAGTGCAT
GCCCCGGTGTGTGATGGTCCAAACCTTACAGTCGGTTGACCCGATACATG
TCAATAATTGCCAATTTCTCGGCAGATAGACATACGTGGTCACGTAGAAG
AAGAAGAACACGGTAAAAGCAAAAGAAGATAACAGCAAATATTAGGCTAG
CCCCTGAGGGAGGGGTCGCCGAAAAGAAAACAGCCATTTAAATCCGATTA
TAGGATGACATTAGCACGTGCATCAATTTTCCTCCGTTTTCAAAAATATA
TTTTTCACCATATTGTAAATCGTACAAAGCAACTGGAAAATGTGCAAATA
TGTGCCGTTAATTCGAAAAAATATCTGAAAATGAATGCTAATGTCGTAAA
ATGTCAAAGTCATTTCAAGAAGATGTGGAGGACCAAACAATTAAGAATTT
ATTGTTAGGCATACCATACCCTGTGTGTTTAGTCATCTGTTCAACATTCA
TGGCCACATAGTTTTTACAATGAAGGCAACTTTTTTCCCAAACATTTTTT
TTCGTATGCTCGCATCAGGATTTGAGTTCCCACAGGATGTCATCCATATA
ATCGAATCAACGTGGCCCAATAGTAATAACAATAATGTACAGTTTTGCCC
TGTGATCCAAATATATACACCGCATTTTACAACATTTCTAGCCCTAATAC
CGCGATATCCTGTTGTCACTGGGTGTTGGGAAGCTCGTACGATGTGTTCA
ATTGTGTACTTTGAGAAACATTCTTTAATGTTCTTTTGCAACGTTACCAG
GTTGTGAACACTGATGGAGAGTACGTCCCAGCCACGCCCATCCCGGGCAC
CATCGTAGTCAACATCGGGGACACCTTACAGAGGTGGTCAGCTGACAAGC
TCAAGTCGACGGTAAGATTAGTGCTTGCTTTTATCCTGGCATGGGGGGGG
GGGGTGCCACATATATTTCCCGTCATGCCAAGGGAGTTGCGTCAAGGTAG
CAGAAAACAGTTTTCGGCCTAAGGGGATTTCTATAGTTAAGGGCCACAAT
GTGACTGGCTTGGACGAGGTGAAAATTATAGAAAGGTACACTTGAAAAAA
AAAGGAAAAACACATTTTTTTTTTAGTTTAGGGTAAAACTGACAAAATTT
TCGAAAACTAAAAAGGTCCGTCGGCGTATCGGCTTCTCACACCAACTTTG
AAACAGCGCTCTGCGAGATATCACCGAACTGCAGCCGACTCACCCAGAGA
GGCAGTTGCGTAAGAAGGTGCATTTATACACGAACTGGACAAGGTTCACT
ATCCAAATCCTACAGTCTACAAGCCGACATATTTTACACCACACAGCACA
ATTTACACTTGGATGCCTCTTACATGTGACTTTCTACCCAGTCTTCAACA
ATTTTGGCCGTACTACTTTTTGTACCCGCGTCATAGGGAAAATACTGTGT
TCTGCGATCTCAAAACCCTTCCCATCACACACCTCTGCCTTAGCATTATG
GGAAACAAGATGGCGCCCGCAAAACAAACAGCATGGCGCCCCCAAACAAA
CAAACAAACAAGCAACATGGCGCTCGCATACAAAAAGTTTTGGCGGTGCC
CATGAATGGTAGCTAAAACAATAGAAGAAGAAGACCTTTATTGCACGACA
ATTGTACACGGTACAATGTATGGCAACAACTATCGAACAATTAGTACAAA
TTAGAGGTATAGAATAAAACTTGACATCCTAATTACTGATACAATAAGGG
CTAGCGTGAGGGTTTGATATAGTGGTACAATCTAGTGGCGTAATCATTAC
ATTCTGTATTTTTTCTCATGACAAAGCAGTCTTTTATGTATTTACCTATT
TTTGTATTGCGCGGGGGTTGTTGCATCGAAAGCCATAATCAAATCTGTCT
TAGGAGCATCGAGACTCTTCAAATCTGTTGTTCTTGATTTGAGAAATGTG
AAGAACGTATTACGTAAAACATCATATGTAGAGCATTCCATGGCAAAGCA
AAATTCATCTTCAATTTGCTAAAACAATATGGGCTTCTCATTCCTGTACA
TGTAATAACATTAATGTGTGGTGTTGTCCCACAGAGGCACCGTGTACGGG
TGCCGGAGAGCCAGGAGGAGAAACAGCGCGTGCGCCGGTCCATCGCCTAC
TTCTTCCACTGCGACAGTGACGTCGAGATGAGGTGTCTGGACGGGTCGGA
CAAGTACAAGCCAATGTTGGCAAGAGAATACCTGAACCAGCAAGTCGGAG
CCACCTACCTGTCAGGATAGCTGGGCTCCTCAACTGAACATCACCTGAGT
GTGCTGTTTTGATTTGATTTGATTTGATTTGATTTATCATGGTGTATAGA
ATAGCATATAGCCAGGGCTACCCAACTAGCCGGAGGCTAATACAAAAAGA
TAGCCCCGCTAACTAAATGAAATACAATGTACAAATAGAAACCGTTGCAA
TGCATATTTGAATGCGTTAATGGTGACAGCTTTTACGTAGATTATACAAA
GTATGCAAAGCAGGGAGTTATTTTAGATACGGATGCGTCTAGTCTGTGTT
ATTACTAGTAACACCGTGATAAAAAAAACGAACGTTACAAATCTAAAAGC
TATCTGATCTGATCATTATGTGTATACGCTTTGTACAATATCAAGGCAGG
CAGTTCAATGCGTGCAGATTGTTTGCTACCAAGCTGTTTACAGGGTGTTT
CTCATCGAGCGATGTCCAGAGTACAGAGTGTTTGCTATATTTGTCACCTC
CATGAAAATGGTGCAGCTTTGATATTGCTTACCCAAGATCATGAAGTGCA
CTTAGACCTATCAAAAGCTAAGCAGTGCAAACTGCACTGTCTTGATATTT
GCGGAACTTTGATTAGTTAAGCCACCTAGGGCGCCTTGCACCTGGTCTAT
AAAAGTCGGGACACACTGTACTTGTGCTCATTCGAGCCCTAACCATTGAG
AAAACCACAAACAAGGCGAAACTAGTCTGGGTGTGGACTTGAATAAAGTT
GTAAACGGGAGCTCTGTGGCTACAGCGTCTTTTCTGAAGATGTGAGATGG
GTGTGTACGGTTGACTTGAGGTTGTCCTGATGGCAAGGAGTGTCAGGGTT
ATTAAGAGGAGTGATAGGGTAATATAATTTAATTTTTACCACTGGAAAAA
TACAATGAAAACCAGACGTTTCGAGCGCCCATCCGGCAGCCCTTT Coding sequence (CDS) from alignment at Sc0000493:29545..37489- >Blg02272.10 ID=Blg02272.10|Name=Blg02272.10|organism=Branchiostoma lanceolatum|type=CDS|length=960bp|location=Sequence derived from alignment at Sc0000493:29545..37489- (Branchiostoma lanceolatum)
ATGAGTGGTTACATCCCTGTGGTGGATTTCTCAGCCTACAGCCTTGACAA
GAAGAATGTGAACGACGCTGATTTGGAAACGCTGACGGAAGAACTCATGC
AGGCTTTCACTACCGTGGGCTTTGTGTACCTGAAAAACGCAGGTATCCCA
ACAGCAGAGGTAAATAACGTCTTTGACGTATACGATGAATTCTGCTTTCA
ACCTGAAGCGGTGAAGGAGAAATACTCCCGGCCGGTGGACAAGACAGCTG
AGCGGCACGGCTGGATGGCTCTGGAGAGAGAAATGTTGTCTCTGGTGGGA
AGAGACAAACCTGCCCCTGGTGACTTAAAGGAATGCTTCAACATTCATCC
ACCTCTTACTGAAGGGCAGACCTGGCCGGAGGAAGTCCCCGAGTTTGAGC
CAGTGATGATGGATTTCTATAACAAGTGTCACGTGATCGCCATACGCCTG
CTGAGGATCATAGCCAGGGGACTGGGCCTCGAGGATGTAGACGGTTTCTT
GGGAAACTTCCAGTATGTCGGGAAGGGTCGTAACGGCACCAACCTGCGAA
CCCTCCGCTACCCTCCGGTTCCTGACGTCATCAAGCAGGACCAGGTCAGG
TGTGGAGAACACACGGACTTCGACTGTGTGACCCTGGTGTTCCAGGATAA
CCCTGGATTGGAGGTTGTGAACACTGATGGAGAGTACGTCCCAGCCACGC
CCATCCCGGGCACCATCGTAGTCAACATCGGGGACACCTTACAGAGGTGG
TCAGCTGACAAGCTCAAGTCGACGAGGCACCGTGTACGGGTGCCGGAGAG
CCAGGAGGAGAAACAGCGCGTGCGCCGGTCCATCGCCTACTTCTTCCACT
GCGACAGTGACGTCGAGATGAGGTGTCTGGACGGGTCGGACAAGTACAAG
CCAATGTTGGCAAGAGAATACCTGAACCAGCAAGTCGGAGCCACCTACCT
GTCAGGATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02272.10-exon-Sc0000493-1570713199:37326..37489 | Blg02272.10-exon-Sc0000493-1570713199:37326..37489 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:36193..36616 | Blg02272.10-exon-Sc0000493-1570713199:36193..36616 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:35451..35575 | Blg02272.10-exon-Sc0000493-1570713199:35451..35575 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:34407..34491 | Blg02272.10-exon-Sc0000493-1570713199:34407..34491 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:33851..33964 | Blg02272.10-exon-Sc0000493-1570713199:33851..33964 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:33134..33313 | Blg02272.10-exon-Sc0000493-1570713199:33134..33313 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:31829..31939 | Blg02272.10-exon-Sc0000493-1570713199:31829..31939 | Branchiostoma lanceolatum | exon |
| Blg02272.10-exon-Sc0000493-1570713199:29545..30655 | Blg02272.10-exon-Sc0000493-1570713199:29545..30655 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000493 | genome | Sc0000493:29545..37489 - |
Properties
| Property Name | Value |
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| GeneID | Blg02272 |
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