Blg02210.10 (mRNA) - B. lanceolatum

Overview
NameBlg02210.10
Unique NameBlg02210.10
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0000697:42..4492+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02210.10 ID=Blg02210.10|Name=Blg02210.10|organism=Branchiostoma lanceolatum|type=mRNA|length=4451bp|location=Sequence derived from alignment at xfSc0000697:42..4492+ (Branchiostoma lanceolatum)
CATCCATAAGATTAAGTTGGTGTGGCCTTATCTAACTCTATACTTGTATT TATTATCAGATATTGTCATCATGTTTTTTTACTGATGGCACACATATTTG ATCATTTGGTAAATCAACTGTACAGTTACATATGTAGATATCTAATGTGT ACATCTTTGTCTTAGTCCTAAGTTAAGTCCTACTGTTAACCACAAGCTTT GCAATGATAATGATATTCTGAACAGTAACTGTTTTTCAACCTGATATTGA AAATTGCTTCATTACACCTTAACACTAGGACTGCTTGTAGACAAGTGTTT TAAAAGTTATGCATAATTTGCTTGTGTAATACTAGTATACACCTCTCAAT ATGCTTTCATTCTTTCTATGCTCTGTAGTACCGGAGCTGTCATATATTTC ACCTTTACTGATGCTTTACTCTCCCCGTCTAAACCCATTGTGCCCTACTA GACTTTCTCACTGAAAAAAGTGAACACCAGTGTGGAATCAACTTCAGACA AATTAGAGGTATTTACTTTCTACTCTCTCTCTTCCTCTCTCTGTCTCTTG CTGGTCCTTACTGCACTGCTCATGTATGCACTGTACCATTGCTATTGTAC TCCCGCAAACCCCTGCATTGCCTCTCCTGTCTGGGTATGCAGGCTTCCCC CCCACCTGTGCAGCCTAAAACGCCTGATGGACTATGGGGCCTCCTTCCCA TCCCAATACAAGCTCCAGAGGTGTTGTATTCTTGCTAGAATTTACATGCA CATGAATTTGTTTTCTATGTTTGTTTTTCTAAGAATATAGAACAAACACA TCATTGCATTGCTTTTCTCCCCTTGCTTCATTTGTTGCTTTATGTCAGTA CCTATTTTCTATTTTGTAACCTTGGTGACATTCTGCCTGTACTTTTCAAG GATCCTGATGACACCTCTGAGGCCCCTTCAGTAGTCCCAAATGTGTCTTC TGTGGCAGAAAGTGGCAAGTCTGAGCCAGAACTCACTACACAGTTGGAAA GTTCAGAGGAAAGTTCAGAAACAATGTGTCATTTAGACTCTAAACCAGAA CCACCTGGTGACACAGAAGGCCAGCTAGAGGCTACCCCCAAGCCGACTAA ATCTGAGGCTGAAACTATTAGTGTTATAGATGCTAAAGACGCCATAATTC CTAGCACTGAGACAGTCTTTACAGCTGAACAAAGTGGGCCAGATGTACCT ACTGTAGCTCCTAAAACAGAGTCAGATGCTATTAACACATCTTTTGAACC TGAAACGTCTAGCACAGAAGTTGTCACTGAACTTGAACAAAAGGCACATG AGGTAGATACCAAAGCAAAAATAGCAGAAGCAGTAATTGTTGACAAATCT GAACCATATGAAGCTCCTAGTACAAAGTCTGTTATCAATACTGAGCAAAT TGGAGAAAAAGATAGCACAACTGAAACTCACTTAGCACAAGTAGAAAGTT TAACCAAACCACAGAATGCTGATGCCAATGGTGAAGCCCATGTAGATCAA TTTGTGTTGGATACAGTAAACCTAAATGGAGAGCTTCAGTCAGAAGTCGT AACAGAGCTTGAGGCTGAAAATGTAAATGTGGAAGTCTTGCCCCTCTCAG AAAATCTGGAGTCAGAAATTCTTTGTCAGGAAGAGACTGTTTCTGATATT GTACCACATGTTGTAGAAGGGAATACCCAAGTCATGCCTCAAGTAGAAAG CCCTGATATTGGAGTTGAGCCTAAAATAGAAGAACCTTACAAGCAAGTCA CAACCCAACCCAAACCTGTTAGCTCTGAAACAGATCTAGAACATGGCCCA AAACCTACTGCTATGGTAGAACCACTTCCACAACTTGGGACACCACAAGA TGCAGTTGATATTCCACCAGACTCTTCATTACTAGAGGTACACTTCTGCC CTTAGAAAACGATACAACATAATGTAATTATTTTCTGTCTTGTCATTCTT TATCTTTATTGTTGTGCCTTTTCTCCTTGTTCATTATTGTATTTATCATG CACAAACAACTTATTTTTCTCATTTTGTTCCTTCTTTGAAATGATCAGCT TTCTTCCCTTTTGCCACATTTCCAGACCACACCAGCAGTTCCCATTAATA AAGTAGATCTGCTTCCGGAAATACCAGCTGTTGAGGTATTGCTTCATTGT GGTACTGTACTTGTTGGCTGCATGGTTCTTGACTTAACAATTTGGGCTGT AAAATAGGTTTGGATAAAGTCTTACTCTATCTCACTAAGATAGCTTTCTC TTTACTTTTTCCCTCTGTGAAACAGTGTCTTGAAGATGAAATCTTCCCCA TGTCTGAGGACCTGTCACTGGCAGAGTCTACTAAATCAGAACAGGGAAAA GATACATACGAAAAGGTAGCAAACATAGACCAGCATGCATTGAAGATACT AACTGCTTAAAGATACAACAAGAACAGTGGTATTCTGTATAGGGACATTT CAGTCAAGAACATTGTTGTTGATCAAACTTTAAAGTGTATGGATCAACGC ATATTCAAACTTAGATAAGTTGGAATGACTGTCACTGTCAGTAGTAATCA ATTGTGTTGGGCATTATCAGTTCCATGTAGTAGATCTTAGCCTCTTTATT AGACTTGAATCTAACCCTCACCCTGCTGAGATGGCCCTTTTTTACCAAAT TTGTGTTGGTTACTGGGTTAGGCAGCAGCAAAGATGGACTCGCCTTATGA TTATACTTTGTTTACTCTTGCAAAAGGAATTGGTTGCAGACTTGTGCAAG GTAGCTTCCAAACAGCTGGTTGACTTGGACGATGTTTCCATCTTAGACAC AGATGACTTGGAGGTTGGTTACAGCAGCTCTAACCCAGTCATGTGGCTTG TTGACTGACTCAACCATGTAATAGCACAATAATATCAGGCAACTTATAGA CTTTCAGAATGCTGCAGTGAAATTACTCACAGCAATTGTACTATGCTTCT TTCACATGGTAACAAGTAAATCACCAGAGCACATGTACCGTATATGCTGG ACCTAAACCCCAAGTTAGATAGTTGGAAATATTATAATGATGATTTTGGA TGTTGAATGCTATTTCTCACTCTTCTGAGTTTTTATTAGTTGTATCTTTG GAATGGCTGATTACTAAATGCCTCCTATGTTTGAACTACTTCTACCTGCT TTCTTTTTACATCCTACAAAGATTGTGGAATGTGGATTTGAAGATAATAC AGAAGATGACTCAGTCTTTACGGATGAGGTATATGACGTGCACGCTTCAT TGTTTTTTTTCTGATTGCAATGGGTTTAGAAATATTGACATAGCTAACTT TTATCATCCTGATATTCTCTTCTGTTTCACTTATTTTTCTGTTTCTTTGA TTGCCTTGCTCTTCTGATGTGTTTATTTTTGTGTTGTTTTTTTCTGTGCA AAAGTGTCTGTCACTATCTAGCTCAGCATCCACAAGGGATATTGAATCCT TAAAAGTGACATTCAGTGACGACATTGCTGTAAGTTGTCAGTCACCGTGG ACTTTGACACTGTTTTATCTTGCCTTAAAAAAACCTGGCTAACGGTTTGT TTTCTTTATTTTCTTGACATTTCCTTGTACTTTCTTTGGTGATTTCTAGT ATGGTGCGGGGGGGCAAAAGGAGCCTACAGATGACTTTTCCTGCGACACA CTTTCTGAATTGAGCCTCGAGGTATCTGTTGTGTCAACTTTGTATCTGCT TTTCTACCTTTTTCATTTTTGCTGTCATTCCTTCTACAGTCTGTGTTCCT ATCACCTTTGTCTTCCATTATTGTTTCCTGTGTATGATTATTCATTTTGA TACGAAAACAATTTCTTACCCTGTGAAGAGCGACCTACCAAAAAGTGAAG ATTCTTCAGCAGAACCTAAAGCAAAACTACAGTCAAAATCAAAGTCGCCC AAATTGAAAAAGGTACAATACTACCCCTTTGCACATCATGAACGCAGCAT TGCTACTTTATCTCTGTTGAACAGGCTATCATATTTTCTCATTTCTTGTC CTTTTGTTTTTGAGTCAACCTATTTTGCACAACGTTGAAGTGTGCATCTT TCCAAATGTTATTTTTACCCATGGGTGTGTACTATACTAGGAGTCTACCA AGCCTGGTTCCAAGCAACCAACACCAAAATCTTCTAGAAAGGAGTCAGCC ACAGAGAAAGGCAGCAAGGTAGATGGATAGGATGGGTAAACCAGCATTTT GCCATAAGGCCTTGTCATGTGTTAACAAGTTTAATAGTTTCGGGAGAATC TTGAAGTTGTCTCTTGCATGACCTGAGATGTGTTACGTGGGAGTCTGATA TTGACATGTAGCTGGTAGCATTATTGCCTCCTATAATCTACTTCCACACA AGTAACTTCTGTACATACCTATCTAGCAGTCTTGCACATATAGACTAGTA GTAGAACTGAAGATGACCATAGTTTCTGTCAGGTTTTCTTTCCTATTCTT C

Coding sequence (CDS) from alignment at xfSc0000697:42..4492+

>Blg02210.10 ID=Blg02210.10|Name=Blg02210.10|organism=Branchiostoma lanceolatum|type=CDS|length=996bp|location=Sequence derived from alignment at xfSc0000697:42..4492+ (Branchiostoma lanceolatum)
ATGTGTCATTTAGACTCTAAACCAGAACCACCTGGTGACACAGAAGGCCA
GCTAGAGGCTACCCCCAAGCCGACTAAATCTGAGGCTGAAACTATTAGTG
TTATAGATGCTAAAGACGCCATAATTCCTAGCACTGAGACAGTCTTTACA
GCTGAACAAAGTGGGCCAGATGTACCTACTGTAGCTCCTAAAACAGAGTC
AGATGCTATTAACACATCTTTTGAACCTGAAACGTCTAGCACAGAAGTTG
TCACTGAACTTGAACAAAAGGCACATGAGGTAGATACCAAAGCAAAAATA
GCAGAAGCAGTAATTGTTGACAAATCTGAACCATATGAAGCTCCTAGTAC
AAAGTCTGTTATCAATACTGAGCAAATTGGAGAAAAAGATAGCACAACTG
AAACTCACTTAGCACAAGTAGAAAGTTTAACCAAACCACAGAATGCTGAT
GCCAATGGTGAAGCCCATGTAGATCAATTTGTGTTGGATACAGTAAACCT
AAATGGAGAGCTTCAGTCAGAAGTCGTAACAGAGCTTGAGGCTGAAAATG
TAAATGTGGAAGTCTTGCCCCTCTCAGAAAATCTGGAGTCAGAAATTCTT
TGTCAGGAAGAGACTGTTTCTGATATTGTACCACATGTTGTAGAAGGGAA
TACCCAAGTCATGCCTCAAGTAGAAAGCCCTGATATTGGAGTTGAGCCTA
AAATAGAAGAACCTTACAAGCAAGTCACAACCCAACCCAAACCTGTTAGC
TCTGAAACAGATCTAGAACATGGCCCAAAACCTACTGCTATGGTAGAACC
ACTTCCACAACTTGGGACACCACAAGATGCAGTTGATATTCCACCAGACT
CTTCATTACTAGAGACCACACCAGCAGTTCCCATTAATAAAGTAGATCTG
CTTCCGGAAATACCAGCTGTTGAGGTATTGCTTCATTGTGGTACTGTACT
TGTTGGCTGCATGGTTCTTGACTTAACAATTTGGGCTGTAAAATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02210.10-exon-xfSc0000697-1570713199:42..549Blg02210.10-exon-xfSc0000697-1570713199:42..549Branchiostoma lanceolatumexon
Blg02210.10-exon-xfSc0000697-1570713199:942..1928Blg02210.10-exon-xfSc0000697-1570713199:942..1928Branchiostoma lanceolatumexon
Blg02210.10-exon-xfSc0000697-1570713199:2117..4492Blg02210.10-exon-xfSc0000697-1570713199:2117..4492Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02210.10Blg02210.10-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0000697genomexfSc0000697:42..4492 +
Properties
Property NameValue
GeneIDBlg02210