Blg02127.0 (mRNA) - B. lanceolatum

Overview
NameBlg02127.0
Unique NameBlg02127.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000450:160820..163159-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02127.0 ID=Blg02127.0|Name=Blg02127.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2340bp|location=Sequence derived from alignment at Sc0000450:160820..163159- (Branchiostoma lanceolatum)
GTCAAAGTCCGGTACCTGTTACACTTGACGCGGATAGCGAAACACAAGGG TGAAAGTTATTTCAGCTGCCTAAAGATTTGCTTGTACCCGTCTTCTCTGT GGACACATCATTGATACACGATGGCAGTAAGTGATAAAGCCTTGGATTTC TCCTGTGACATTTTGTTAAATTTTCAGGTCACTCTGAGAAGTACTATTGG CGTCTTTGGACCACGAATGCCTATCAACGTGACTTGATCTATTGACTCAA GGCCCCACCATGATGTATATTCGACATGAGAATGGTTCAGCCACAATGTA GACTGCTGGACTTCCCTTACACAGTTGATTATACTCTGCATTTGTTAACT TTCTAGAAACCAACATGATATCGTAGACGTGTTGAATATGATTTAGTTAC CAGCCGCAAATATGTTAAGTGCAAAAAGCGGAAATGAAACTAGCTATAGT GGCAAACAAGCAACATTCTAATTCTAACTGCAGAAACTGTATACTGAGTT TATGAGCTCATGTTGTTATATGCAATTGTGGGTTATATACTTTAGCTTAG CTAAAATGTATCTAGCTATTATCTATTTTCGTGTCATCCCTTTCTACTCA GAGTTTTCCGGAGGTCATTCCGTTGAACGTCGGTGGCCGCCATTTTGACA CGACCCTCACGACCTTGCGGAAGTACAAGGACTCCAAGTTGGCCGCCATG TTTAGTGGAAGTGATCATGTCGCCATGGACAAGGTACCTTTTCAGATCTG TTTGATCGAACGTTATTCATCTTAGCTGTCTGGTAGCATATATTCATATA ACGTACGACGTTTGCTCAATACTGTAGTTATGTCCACACTGCACTGACAA AAGGTAAAAACTTGAACGTCTGACCGTTTTAGAAAATCCATCTGATATCT TGTGTATCTTATTACCAATATGTGTTACCTTCATCGATGTCTACAGTTGA TAATTCATACTTTCGGTGGTTATATTGTGAGAATTTCCCGATGAGTTCGA ACTCTGAACGTTCATTTCAGGACGGCCGTTACTTCATAGACCGGGACGGA AGTCACTTCGGCCACATCCTGGACTTCCTCCGTCAGGAAGAACTGCCTCC TCCAGAAGTGGCCAAGGGCGTTCTCAAAGAGGCAGAGGTCTACGGCTTAC ATCAACTCAGCGAGAAGCTGAAGAAGACGTCTGTACCTTTCTTCCTCGAA GCAGTCCTTAAGAAACGAAGTACTGATTTTGTCGAAGCCCATCCAAAGTT AGCTTCGCTCACTCGTGATGTTATTGACGAGGCGCGTAGAAAATTTCAGG AGAATCGAACCGAGACGTCCTCCGTTACAATCTGGATCCCCGCCCAAACG CCCAGGTTTCCCTTTCAGGTTATCAGTGGCTCCCCGCACGACTGTACGGC AGGATGTCTTATTGTTGAGCATATTCCTGAAAACGTGATAAAGGAATATA TTAAGTATAGCAGCAGCCACTTGCAAGAGTGTGGGTATAAAGTTGAGACG GATCTTCAGCAATGTCCGAACATGGTGTTTCAGTGTCCAAATATTAATTG TACGGCAATCTTATCGGTTGATATCAAAGATTTCAGATCAGTTTGTCCAA AGTGTTCAATGTACACGCCTACACCTGAAATAGCTCTCTGTGACAGTCAG AAGCTATGCTTTACGTTCAAGTGGTCTCTTGTGGGCATTAACCCTGCATT GAATCCCTTGTTTGGTGAGTGAATCTTCTTATTTCCAAATCATTCTTTCT TTCTTTCATTACCTTCGCCGGGAATGTATGCATTCGCGGTAAGGTTATGT TATCGGTTACGCCAGCTGTAAAGTGGGTCCGTATGTATGTCGAGATCATA AGTCGAGAGAACTTTGACGGATCTTGCTGATTTTTGGTAGGTAAGTGGCG GTTGTAGAAACGAAGGTCAAGCTCGAAAATGGTTAACCTGGCGTTTTTTT AAGGTGCTCTAGTGGACTTTTTTTGTTAGTGTGTTTGTATGTAGACAACA TAACTCAACGTATTGATGATGGATCTGCATGATTTCTGGTGGGTACGTAG AGATTGTAAAAACGAAGCTCAAGTTCAAAAATGGGTCACCTGGCATTTTC CTGCGGTACTGCAGTGGGCTGTTTTTGTATGCGTATTTGTTTGTTGACAG GATAACTCGAGAAGCTGTTGATGGTTGTGCATGATATTTAGTGAATAGGT AGATTTATTAAAGGGGAAGGTCAAGTTCGATGATGGGCCTCCTAGCGGGT ACTTTGGGTACTGCAGTGTAGCTTCAAAGTTTGAGGTCGAATTTTCTGCA AGTGCTACGGTCATGATTTTTGTGTGGTAGATAGTCCATG

Coding sequence (CDS) from alignment at Sc0000450:160820..163159-

>Blg02127.0 ID=Blg02127.0|Name=Blg02127.0|organism=Branchiostoma lanceolatum|type=CDS|length=840bp|location=Sequence derived from alignment at Sc0000450:160820..163159- (Branchiostoma lanceolatum)
ATGGCAAGTTTTCCGGAGGTCATTCCGTTGAACGTCGGTGGCCGCCATTT
TGACACGACCCTCACGACCTTGCGGAAGTACAAGGACTCCAAGTTGGCCG
CCATGTTTAGTGGAAGTGATCATGTCGCCATGGACAAGGACGGCCGTTAC
TTCATAGACCGGGACGGAAGTCACTTCGGCCACATCCTGGACTTCCTCCG
TCAGGAAGAACTGCCTCCTCCAGAAGTGGCCAAGGGCGTTCTCAAAGAGG
CAGAGGTCTACGGCTTACATCAACTCAGCGAGAAGCTGAAGAAGACGTCT
GTACCTTTCTTCCTCGAAGCAGTCCTTAAGAAACGAAGTACTGATTTTGT
CGAAGCCCATCCAAAGTTAGCTTCGCTCACTCGTGATGTTATTGACGAGG
CGCGTAGAAAATTTCAGGAGAATCGAACCGAGACGTCCTCCGTTACAATC
TGGATCCCCGCCCAAACGCCCAGGTTTCCCTTTCAGGTTATCAGTGGCTC
CCCGCACGACTGTACGGCAGGATGTCTTATTGTTGAGCATATTCCTGAAA
ACGTGATAAAGGAATATATTAAGTATAGCAGCAGCCACTTGCAAGAGTGT
GGGTATAAAGTTGAGACGGATCTTCAGCAATGTCCGAACATGGTGTTTCA
GTGTCCAAATATTAATTGTACGGCAATCTTATCGGTTGATATCAAAGATT
TCAGATCAGTTTGTCCAAAGTGTTCAATGTACACGCCTACACCTGAAATA
GCTCTCTGTGACAGTCAGAAGCTATGCTTTACGTTCAAGTGGTCTCTTGT
GGGCATTAACCCTGCATTGAATCCCTTGTTTGGTGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02127.0Blg02127.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02127.0-exon-Sc0000450-1570713199:163034..163159Blg02127.0-exon-Sc0000450-1570713199:163034..163159Branchiostoma lanceolatumexon
Blg02127.0-exon-Sc0000450-1570713199:162427..162558Blg02127.0-exon-Sc0000450-1570713199:162427..162558Branchiostoma lanceolatumexon
Blg02127.0-exon-Sc0000450-1570713199:160820..162139Blg02127.0-exon-Sc0000450-1570713199:160820..162139Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000450genomeSc0000450:160820..163159 -
Properties
Property NameValue
GeneIDBlg02127