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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:296542..305316- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02107.5 ID=Blg02107.5|Name=Blg02107.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8775bp|location=Sequence derived from alignment at Sc0000294:296542..305316- (Branchiostoma lanceolatum)
TCGGCGTAACACCCAGCTTCACAGGCACGCGACGTGTATGCAAGGGATTT
TACCTTTGCTGGGCATGCCCACAAATTACGTTTGATCACGCTCAATGTCT
GCTTAGCCTTTACTTTGTTAATATGGGTACCCCACAGTTCAGTCCAGTTG
TTGATGTAACGCCTAGGCTAGGTACGGGTGGCTTTTTGTAAGTTGCTAGG
GCCTGTCCACAGAACTGTTGTAGGTGGTTACATTTGGGGTTCGTTTGTTT
GTTATGTGCATTATGTAACATTTTTCGGGATTAAACTGCATGATTTGCTT
TGCCATTCCTCGATCTGCGTTCAGATCTGCTTGCAGGAGTTGTGAATCAT
TCTGTGTAGATAACTCTATATATAACAGGCAGTCATCGGTAAATAACCTC
ACAAATGTTGTTCAAATCAAGCTGGCCTGGCAAGTCATATATGTACAAGA
GGAAGAGCAACTTGGTTCCTTGTGGAACGCCTGACGCAACTCTATTAAAT
TGGAGCTGAGGCCTTCCCTTCTACCACTGCCGTCTGACCACATGCATACA
CGTTGCGTCTGTTTGAGATAAGCAAACACCTTGCGTCTATTTGGGATAAG
CAAACACCTTGCGTCTGTTTGGGATAAGCAAACACATTTACGTTTGTTTG
CCGGATAATCAGGTGAGGTCATACAGCGGACAAAGGTCACAGTGCACGAG
GGTCAACGTGCAACTGAACTGGCCGTCTGTGTATGAATATGACCGATGTA
ACATGCCGGTTAACATCCCAACTATACTTCGATCAGGTGTCAGGCTGCCT
ATTTTAGGACTTGGAACATGGAAGGTGACTAATATCTATTGATTTTACAT
GTTAAACATGGTTCAGGGGACATATGTTGATCGTACTTCTCGGACTTTTG
ACACCTGCCTGCCCGTCCCAAATGCTTCCGGCAAGGAGGTTAAGATGATT
TTAACGTCCTTGCTTCAGGCACGAATTCATGCCACGCTTACGGCATAACA
GCGTTATGCGACGGAAAGGTTTCATTATCGCTAGTAACTATATACCTCTG
TTATTTGATATACGACTTCCACAGTTCGACAATGTTCGGCTCTGGAAAAT
AAATCTTGGTCTGCAGTTAAACNCACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACGC
ACACAATCCACTAAGTACTTTTAAATAAGCTTGCAGTCAACTTTGAATAT
TATGATTTTTGTTGCCGCGTCATTTCAACAAATGGATTTCACTACTGAAG
ATAGCTGTAGGATCATGAAACTGCAACCTGTGTGTTTTAGTGGTAGATTG
TAAATGTTCATCGTCACCAAGGTAAATGGTTTGGTCTGGTATAATCATTC
CTGTCTGATGACTTAAATCTTGTACGTTTTCTACCTTTATATTCCGCGTA
ACTGTCATGTGTAATCAACCATTGGCATATCAAAACCGCGAAAAACGTCG
TCATTTATGTTTCTTAGCATGATATCATCCAATCTTTCTTAGTAGCTAAT
CAAATATGTCCTTTATGACTGTGAATAGTCCAAACCGAACGAAGTCGCCA
CAGCCGTGAAGGTGGCCATCGGTGCAGGGTACCGACACATCGACACCGCG
TGGAACTATGGGAACGAGGCGGAGGTGGGGCAGGGGGTGAGGGCTGCCAT
CAGGGACGGGACGGTGGAGCGGAGAGAGCTGTTCATCGTCACCAAGGTAA
GACGTAAAATCCCCTCTCTCCCTGGACCCGCGGCACGTTGGCGGCGTCAC
AGCGTCCTAGACTGGATTTTATATTGGGAATATCATGCCGTTGATACGTA
CCAGTATGACTGAAAAGACAACAAAACACATGCACGAAGCTTGAAAAGAT
TCGTTTTTCATCGATGAAATCGGCTGGTCGCAGCGAGTCGCCAGCGTGCC
GCGGTTCCAGTGAGATAGGGGTTTTAGTCGGTAGCTCAGAAATACACTGA
TATATGTTCGGTAGCTACAAATAGTCCACTTTGGGCTCAGTGATAGATTT
GTTCAACATATTTTGCTGACGATAAGATCCATGCATGCCACTGGTTATTT
CACTAATCATGTGACGCGAACAGATATCATCTCCTCTTTAAAATCAGTGC
ACCTTTTACCTCATGTCTGTACAGCTGTGGTGCACGTTCCATCGGCCTGA
GGACGTGAAACTGGGCATAGCGGACAGTCTGGACAAACTGGGTCTAGACT
ACGTGGATATGTACCTCATGCACGGTCCGCAAGGCTTTAAGGTTAGCATA
GCATACTTTGGACAGGGTGAACTGGCGTGTATCAAACTTTGAATGGCCAA
ACATGCAAGTGGTATACGTCCTAGCAATGTCATAGTTGCAGGTAAACGTA
AATTCGTAATCAGTTAGATCTTTTATTGCTTTTTAAAGGTGAGATACAGC
AATAACCAAAATTCCCTTCCATTTTGCTTATAAAGGTAATTTCAAATCAA
GGTTTGAAACATCTAGTGCACAATCTAGGCCGAAATCTAGGCCGAAATCT
ATGACGCAAAGTCACATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGT
AGGCCGCAATCAAGGCCGCAAAGTAAATTGTAGGCCGCAATCTAGGCCGC
AATCTAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAA
AGAAAAATCCAGGCCGCAATCTAGGCCGCAAAGTAAAATCTAGGCCGCAA
AGTAAAATCTAGGCCGCAATCTATGCCGCAAAGTAACATGTAGGCTGCAA
TCTAGGCCGCAATCTAAGCCACAATCTAGGCCGCAAACTAAGCCGCACAG
TAGGCCGCAATCTAGGCCGTACAGTAGGTCGCAATCTAGGCCGCAATCTA
GGCCGCAATCTAGGGCGCAATCTAGGCCGACAAGTAAAATGTAGGCCGCA
ATCTAGGCCGCAATCTATGCCGCACAGTAAAATGTAGGCCGCAATGTAAA
ATCTAGGCCGCAGTCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTAGG
CCGCAATTAGAGCCGCACAGTAGGCCGCAATCTAGGCCGCAAAGTAAAAT
GTAGGCCGCAATCAAGGCCGCAAAGTAAATTGTAGGCGGCAATCAAAGTC
ACATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTA
GGCCGCAAAGTAAAATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGCA
GGCCGCAATCTAGGCCGCAATCTAGGCCGCACAGTAAAATCTAGGCCGCA
ATGTAAAATCTAGGCCGCGATCTAGGCCGCAAAGTAACATGTAGGCTGCA
ATCTAGGCCACAATCTAGGGCGCCATATATAGGCCGCAATCTAAGCCGCA
CAGTAGGTCGCAATCTAGGCTGCAATCTAGGCCGCAATCTAGGCCGCAAT
GTAAAATCTAGGCCGCAATGTAAAATCTAGGCCGCAATGTAAAATCTAGG
CCGCGATCTAGGCCGCAAAGTAAACTGTAGGCCGCAATCTAGGCCGCAAT
CTAAGCCGCACAGTAGGCCGCAATCTAGGCCGCAATCTAAGNGTAGGCCG
CAATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTAGGCCGCAATCTA
AGCCGCACAGTAGGCCGCAATCTAGGCCGCAATGTAAAATCTAGGCCGCA
TCTAGGCCGCAACTGAGTAAAATGTAGGCCGCAATCTAGGCCGCAATCTA
AGCCGCACAGTAGGCCGCTTTGTGTTGTGTTGTGCTATGTAGTATTGTGT
TGTGTCGGTTTGGTTGTGTCATTTCAATAAGAGAAACACCTGTGTGCCGC
AGGGACCCAAGATACGCCCGACCAGCGACAGTGACTATGATGATACAGAC
TATGTTGACACTTGGCAGGTTAGAAGCAATTATCATTGATATGTTTCAAA
GCATGTACCTTCAGATATTGTATTCAAATATTTTTCTCTAGTTATTGATC
AAGGTCACATTGTACACGTCACATGTTTTCACATGTTTTAGATTCCTATA
GTGATCATCAAAGGTGGCTATATTAGCTATCTTTGCTGATATATAGTGCA
ATAGGACGGACGAGGAAGGGTGGTAGGACCATTTGTAGATGGACAGTTTT
ACCTCCATTATAACGTTCTGCGCCTTTAATTTTACTTTATCCGTAGCTGG
TGGTGTGACGTTCCCTCCATATCCATCCCCTATGATCCTTCCCGTGTCGT
CCCTATAAATGAACTATGAATTACAGTACCACTGATGTAATTCGTGTTTA
GGCCATGGAGTCTCTTGTTGATGAAGGTCTGACCAGATCTCTGGGCGTGT
CAAACTTCAACAGCCGGCAGGTTGACAGAGTACTGCAAGCGTGCAGAATC
AAACCTATCGTTAATCAGGTGCGTTTAATGCTAATGGCAATATTGCATAC
CACTGATTTTAAACGTTAAACATTGTACAATACTAACTATTTGTCACTGT
TCTGCTTTTCACTAAATCACCCAACAATACTAATCATATCTAGATTGATC
AAAGACTCTTTGTGATTTATTCAACCGACGTTTCGGTGATCAGGGCAATT
ATGACCGGTTCACTCTGCAACGCAGCTGTAGCTATTACAGATGCGGCCCT
AAAAGTACTTGTAATCAAACTTTGTGTCGTTTTTCTCCAGGTAGAACTGC
ACCCATACCTGCCCCAGCTGGACCTGATCAAGTATTGTCAATCCAAGGAT
ATCATCCTTACTGCCTACAGTCCCTTCGGCTCGACCCCTGAAGTTGGAAA
GTAGGTTGATCGTGTCCATTTTCCTCTCGTTCAGACGAGAGAAAATCAGT
GATGACATGATGTTTGTGATTTATGTTTCAGAAGCATTGATGTCTCATAA
AAGCATAAATGGTGTACAGATATATCAAGCTTAATGACGTGGTGGCATAT
GTGGAGAAAATTTTGTACATTTAAAGAACAATTGAATCTCGTCCTGATGA
GATGCCTTTTCTTTTTTACCTATTTCCTGGCCGAGGAAAACTTTTGAGGA
TGTAGTGATCACAATGAAAACTATGTTACCGTAGGTGACTGATGATGTTG
CTTTCTTTCTTTCTTTCTTTCTTCTCACTGCATTTCTAGTGAGCCACGCT
TATTGGAAGACCCAGTCGTTGTGACGATAGGGAAAAGGCACGGGAAAACT
CCCGCACAGGTCCGACTTCATATTTGTTGACTATGTCGCAGCCTATGAAT
TTGAAACACGGCATGATCTGGATCGAAAATGCACATTGAGAAAATGCCAT
GTGACCCTAACGTACTGATTTAGTAACCAGCGATCTATACTTCGATAGGC
CCATGGGCTATCTTGTAGAGAAAATGGACGAGAGAACACGTTTTCTCCTT
TTCTTTTGAATTGATGATGAAGTGTTCCATGTAGGTACTGCTCCGCTATC
ACCTTGAACGTGGGCTCTCCGTCCTGGCAAAGAGTATTACCCCGGCCAGG
ATCCTGCAGAACCTAGAGGTACGTACGTATCGTCATGCCCTCGCCTCAGA
TTCTTCACATTTGAATATATGGCTTTAGGGTGGCGTTACATAGACATGTG
TGAAATAATGGTATAGGGAATGTTTCAAGAAGATGTGATGCAACGTTCTC
TTCCGTGACTTGTTTTCAGAGAATCACATCAGACTGTGCTTTCTCTGTAA
CAGTGATGTTCACCCCAGTATAAAAAAGCTACCTGATGGATTGCACATAT
AAGTAATCTGTTCTTCATTTTGTTGTTTCTTAGGTGTTCGACTTCAGACT
TACAGAAGATGACATCAGGAGTCTGAACAGTCTGAATAGGAATCACCGAT
ACGTCACGTGGCAATAGTGAGTATTTACTGAACGCATTTTCTGACGTGAG
TAAACCCAGTGCTCTCCCTTCTCGGACCATCAATAAAACGTAGCAGGCAA
CCGCCACTACGAACGACAACAGGAATTATATATAACGTTGGGTAACATAA
ATTCGGGATTTTTCCGATAATGGTTGACTGAAATCAATCTAGCAGAACAA
TAAACCATCCTTTTTTTCTATTATTCTGTCAGTATCATGTACTATCTTTG
CACTAATCATATATATGGTAGATTTTGTCTCTAGTCGTGCTGACACCATA
ATATTTCAACTTGAAACTACCGTCCGCCGCACGCACAATGACAGTGCTGT
CGGACAGGGGTGAACATTAATTCGGGAGAGAAGATTCGTCTTGAATATCT
TACCGCTAATTACATTTTATACAGCAGCTATTCGTTCCATCCTTGGCTTG
AGGAGAGTGCTATGGATATAGACGTGTCCAAGTAAAAAAAATACACGAAA
AAACGGCCGTACCGCACACATCAGGCCTTCGGGAACAACCCGTGTGTTGA
GTCGGTAGAACGTCACTCAAAGTCAACCCCCACCGTCATGGAAATTTGTA
CATTATTTGTCGGGGCGTTAGCTGGATGCCGTAGAAATGGTAATACTACT
ATGTCCATGTGTTTCTGCTTGTGCTAAGAGCNCCCCACCGTCATGGAAAT
TTGTACATTATTCATCGGGGCGTTAGCTGGATGCCGTAGAAATGGTAATA
CTACTATGTCCATGTGTTTCTGCTTGTGCTAAGAGCAAACTTTGAGGAAA
ATATCGCCATCAGTCCACTATCACACACAACATTTAGACAAAAAAGTGTT
CCTCGCAAACATTTGTCGTCTGCCGAATAGCAGGATTCTGGGTAACGAAT
ATGGCGGCGGGAAAATTCACCGTAGTGCCGTAGCCATTGGTTGTAGCAAC
AAAGAGGCGTTCTGATGATTAATCACACTTAGAGTCCAGTTGTAGGTTAG
CAAAAGAGATTCTAATAAGTTGTATTGTAAATAATTGTGTTGAGCAGGAA
GCGGATGTGACATTTGTCTTATAAACCAGCGAACAACTATGCAGTATAAT
TCTCCCACGCAGCCCTCAGACTGTGACAATAAGGGACGGAGAGTTTTTGA
CGTAGCCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGANTAATTCTC
CCACGAAGCCCTCAGACTGTGACAATAAGGGACGGAGAGTTTTTGACGTA
GCCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGACAGTGTTCTGAAT
ACGTTAGTCTGTCAAGTTTGCATTTCTAGCGGTATTACTGATGTTGCATC
TAGCACATATCCCTAAATACCCCGTTTTCGAAAAATCCCGAATTTAAGTA
CCCCGCGAATTTATGTTACCCAACGTTATATTATGTATTACGTTCGTGAA
AGTTCTGACGGTAATACTTTTCAATTTACGGGCCGATTTATACTGAACTA
CTGGCACACTAGTTTCTTATAGCCATACGTCTTGCATTATAATGGTGTAT
TGCGTTTAAGCCATTTCACTTTTGTTTCAGCTCCAGGACACATAAATATT
ACCCCTTCGATGACCAGTCAAGATCGGCACAATGACACTTGAAATATCAC
CCTACCCAAACTGGCCAACTGAATTATGTAACTATAATATCTGTCGTGAC
GATCAGTTCATAAAGATGTGTAAACTGTCATTATCTTTACTTAAAATGTT
ATATATATGGAGTACAATTATTGGGGTAGAATAGTTCAATTTCTGCCTCA
TTTTTATGAATATAAAATTCTCAAGGTTAGTTTGTTGAACTGTACGACGT
GGTCCATTATTAAAGGTAGCGACGTGCATCAATGCAGGTAGCTCTATACA
TACTATTACCGTCATTTACTGCAGACACATAGTAGAATGTTATCTGTTTA
TTTGTTCAATACTTTATTTGAAAATCAACTGTGGAGTTTAAGACACTGAT
AGCAATGTATGCATGTACGTGGATTGCTCCAAGTGACGTGTCGACTAAAT
TTACATTCGTAGAAAGTCACATCCACCATGGTTGATTATGCGGAGTCATT
GAAGGGGAAGTACTTGTGGGTCTTGCAGCTGAAAAGGGATGGAAAAGACT
GTTACATATTGTGTATCATTATAGACGCAGAAAGTTTGTGATAGAAATCA
GACGCAAGTTTGCCATTTACACTGAATTTTCACAAATACCTAGATGTCTC
ACTACACTAGTAACTATAACAACGTTTGGTGAATCATAGACGTAACATGA
AGAGAAGTACATCAAGGGGTTCTTACAATGACCAGTCAACATAGCGGTTC
TTCCGGTCTAGGCTGCCCAGCGTCTTGATATCGTCGGCGGTCAGCGAAAA
GTCGAGAACCTGAAAAGAAGTATAAAAAAGTTTCAATGTGCACGCAATAT
CTTCTGGATTGAGCAATAGGTCTATGAACATGGCATCGTGATATGGAGAT
GTTCCAAGTACTGTAGTTAAAATAAGAAGTACGTTTGATGAACATTATGT
TGAGTTGAGAAGTAGAAATGTTTGGGTACTTTACCTGTAGGTTTTCCTTG
ATCCTACTTGGGGTGACACTTTTCGGGATGACAACAATCCCGCGATCCAA
GTGATAGCGCAGCAGGACCTGTAATTATTAATCAACAACCGCGTTTTCAT
TGAAAGTTCACACATTTACTAGTAGATGTCATGTGCGACCACTTGCAACT
AAAAATGTGTTAACGAAAATGCTATAGACCTGTGCAGGTGTCTTCCCATG
GTTCTTAGCGATGTCCAGGACGACAGGGTCCTCCAGAACCCTGGCCTCTC
CTGGCTGGGCACTGCAGGGAAGGGGAAAATCAAGGTACATGTTGGATACG
TTTCATCAAGCACACTGAAACATTT Coding sequence (CDS) from alignment at Sc0000294:296542..305316- >Blg02107.5 ID=Blg02107.5|Name=Blg02107.5|organism=Branchiostoma lanceolatum|type=CDS|length=618bp|location=Sequence derived from alignment at Sc0000294:296542..305316- (Branchiostoma lanceolatum)
ATGTACCTCATGCACGGTCCGCAAGGCTTTAAGGGACCCAAGATACGCCC
GACCAGCGACAGTGACTATGATGATACAGACTATGTTGACACTTGGCAGG
CCATGGAGTCTCTTGTTGATGAAGGTCTGACCAGATCTCTGGGCGTGTCA
AACTTCAACAGCCGGCAGGTTGACAGAGTACTGCAAGCGTGCAGAATCAA
ACCTATCGTTAATCAGGTAGAACTGCACCCATACCTGCCCCAGCTGGACC
TGATCAAGTATTGTCAATCCAAGGATATCATCCTTACTGCCTACAGTCCC
TTCGGCTCGACCCCTGAAGTTGGAAATGAGCCACGCTTATTGGAAGACCC
AGTCGTTGTGACGATAGGGAAAAGGCACGGGAAAACTCCCGCACAGGTAC
TGCTCCGCTATCACCTTGAACGTGGGCTCTCCGTCCTGGCAAAGAGTATT
ACCCCGGCCAGGATCCTGCAGAACCTAGAGGTGTTCGACTTCAGACTTAC
AGAAGATGACATCAGGAGTCTGAACAGTCTGAATAGGAATCACCGATACG
TCACGTGGCAATACTCCAGGACACATAAATATTACCCCTTCGATGACCAG
TCAAGATCGGCACAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02107.5-exon-Sc0000294-1570713199:305282..305316 | Blg02107.5-exon-Sc0000294-1570713199:305282..305316 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:303571..303738 | Blg02107.5-exon-Sc0000294-1570713199:303571..303738 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:303026..303142 | Blg02107.5-exon-Sc0000294-1570713199:303026..303142 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:301399..301464 | Blg02107.5-exon-Sc0000294-1570713199:301399..301464 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:300899..301015 | Blg02107.5-exon-Sc0000294-1570713199:300899..301015 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:300517..300626 | Blg02107.5-exon-Sc0000294-1570713199:300517..300626 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:300108..300177 | Blg02107.5-exon-Sc0000294-1570713199:300108..300177 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:299799..299882 | Blg02107.5-exon-Sc0000294-1570713199:299799..299882 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:299451..299533 | Blg02107.5-exon-Sc0000294-1570713199:299451..299533 | Branchiostoma lanceolatum | exon |
| Blg02107.5-exon-Sc0000294-1570713199:296542..297886 | Blg02107.5-exon-Sc0000294-1570713199:296542..297886 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:296542..305316 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02107 |
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