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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:296972..304634- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02107.3 ID=Blg02107.3|Name=Blg02107.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7663bp|location=Sequence derived from alignment at Sc0000294:296972..304634- (Branchiostoma lanceolatum)
AAGGTCACAGTGCACGAGGGTCAACGTGCAACTGAACTGGCCGTCTGTGT
ATGAATATGACCGATGTAACATGCCGGTTAACATCCCAACTATACTTCGA
TCAGGTGTCAGGCTGCCTATTTTAGGACTTGGAACATGGAAGGTGACTAA
TATCTATTGATTTTACATGTTAAACATGGTTCAGGGGACATATGTTGATC
GTACTTCTCGGACTTTTGACACCTGCCTGCCCGTCCCAAATGCTTCCGGC
AAGGAGGTTAAGATGATTTTAACGTCCTTGCTTCAGGCACGAATTCATGC
CACGCTTACGGCATAACAGCGTTATGCGACGGAAAGGTTTCATTATCGCT
AGTAACTATATACCTCTGTTATTTGATATACGACTTCCACAGTTCGACAA
TGTTCGGCTCTGGAAAATAAATCTTGGTCTGCAGTTAAACNCACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACGCACACAATCCACTAAGTACTTTTAAATAAGCTT
GCAGTCAACTTTGAATATTATGATTTTTGTTGCCGCGTCATTTCAACAAA
TGGATTTCACTACTGAAGATAGCTGTAGGATCATGAAACTGCAACCTGTG
TGTTTTAGTGGTAGATTGTAAATGTTCATCGTCACCAAGGTAAATGGTTT
GGTCTGGTATAATCATTCCTGTCTGATGACTTAAATCTTGTACGTTTTCT
ACCTTTATATTCCGCGTAACTGTCATGTGTAATCAACCATTGGCATATCA
AAACCGCGAAAAACGTCGTCATTTATGTTTCTTAGCATGATATCATCCAA
TCTTTCTTAGTAGCTAATCAAATATGTCCTTTATGACTGTGAATAGTCCA
AACCGAACGAAGTCGCCACAGCCGTGAAGGTGGCCATCGGTGCAGGGTAC
CGACACATCGACACCGCGTGGAACTATGGGAACGAGGCGGAGGTGGGGCA
GGGGGTGAGGGCTGCCATCAGGGACGGGACGGTGGAGCGGAGAGAGCTGT
TCATCGTCACCAAGGTAAGACGTAAAATCCCCTCTCTCCCTGGACCCGCG
GCACGTTGGCGGCGTCACAGCGTCCTAGACTGGATTTTATATTGGGAATA
TCATGCCGTTGATACGTACCAGTATGACTGAAAAGACAACAAAACACATG
CACGAAGCTTGAAAAGATTCGTTTTTCATCGATGAAATCGGCTGGTCGCA
GCGAGTCGCCAGCGTGCCGCGGTTCCAGTGAGATAGGGGTTTTAGTCGGT
AGCTCAGAAATACACTGATATATGTTCGGTAGCTACAAATAGTCCACTTT
GGGCTCAGTGATAGATTTGTTCAACATATTTTGCTGACGATAAGATCCAT
GCATGCCACTGGTTATTTCACTAATCATGTGACGCGAACAGATATCATCT
CCTCTTTAAAATCAGTGCACCTTTTACCTCATGTCTGTACAGCTGTGGTG
CACGTTCCATCGGCCTGAGGACGTGAAACTGGGCATAGCGGACAGTCTGG
ACAAACTGGGTCTAGACTACGTGGATATGTACCTCATGCACGGTCCGCAA
GGCTTTAAGGTTAGCATAGCATACTTTGGACAGGGTGAACTGGCGTGTAT
CAAACTTTGAATGGCCAAACATGCAAGTGGTATACGTCCTAGCAATGTCA
TAGTTGCAGGTAAACGTAAATTCGTAATCAGTTAGATCTTTTATTGCTTT
TTAAAGGTGAGATACAGCAATAACCAAAATTCCCTTCCATTTTGCTTATA
AAGGTAATTTCAAATCAAGGTTTGAAACATCTAGTGCACAATCTAGGCCG
AAATCTAGGCCGAAATCTATGACGCAAAGTCACATGTAGGCCGCAATCTA
GGCCGCAAAGTAAAATGTAGGCCGCAATCAAGGCCGCAAAGTAAATTGTA
GGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGG
CCGCAATCTAGGCCGCAAAGAAAAATCCAGGCCGCAATCTAGGCCGCAAA
GTAAAATCTAGGCCGCAAAGTAAAATCTAGGCCGCAATCTATGCCGCAAA
GTAACATGTAGGCTGCAATCTAGGCCGCAATCTAAGCCACAATCTAGGCC
GCAAACTAAGCCGCACAGTAGGCCGCAATCTAGGCCGTACAGTAGGTCGC
AATCTAGGCCGCAATCTAGGCCGCAATCTAGGGCGCAATCTAGGCCGACA
AGTAAAATGTAGGCCGCAATCTAGGCCGCAATCTATGCCGCACAGTAAAA
TGTAGGCCGCAATGTAAAATCTAGGCCGCAGTCTAGGCCGCAAAGTAAAA
TGTAGGCCGCAATCTAGGCCGCAATTAGAGCCGCACAGTAGGCCGCAATC
TAGGCCGCAAAGTAAAATGTAGGCCGCAATCAAGGCCGCAAAGTAAATTG
TAGGCGGCAATCAAAGTCACATGTAGGCCGCAATCTAGGCCGCAAAGTAA
AATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTAG
GCCGCAAAGTAAAATGCAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAC
AGTAAAATCTAGGCCGCAATGTAAAATCTAGGCCGCGATCTAGGCCGCAA
AGTAACATGTAGGCTGCAATCTAGGCCACAATCTAGGGCGCCATATATAG
GCCGCAATCTAAGCCGCACAGTAGGTCGCAATCTAGGCTGCAATCTAGGC
CGCAATCTAGGCCGCAATGTAAAATCTAGGCCGCAATGTAAAATCTAGGC
CGCAATGTAAAATCTAGGCCGCGATCTAGGCCGCAAAGTAAACTGTAGGC
CGCAATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCAATCTAGGCCG
CAATCTAAGNGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGC
AATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCAATCTAGGCCGCAA
TGTAAAATCTAGGCCGCATCTAGGCCGCAACTGAGTAAAATGTAGGCCGC
AATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCTTTGTGTTGTGTTG
TGCTATGTAGTATTGTGTTGTGTCGGTTTGGTTGTGTCATTTCAATAAGA
GAAACACCTGTGTGCCGCAGGGACCCAAGATACGCCCGACCAGCGACAGT
GACTATGATGATACAGACTATGTTGACACTTGGCAGGTTAGAAGCAATTA
TCATTGATATGTTTCAAAGCATGTACCTTCAGATATTGTATTCAAATATT
TTTCTCTAGTTATTGATCAAGGTCACATTGTACACGTCACATGTTTTCAC
ATGTTTTAGATTCCTATAGTGATCATCAAAGGTGGCTATATTAGCTATCT
TTGCTGATATATAGTGCAATAGGACGGACGAGGAAGGGTGGTAGGACCAT
TTGTAGATGGACAGTTTTACCTCCATTATAACGTTCTGCGCCTTTAATTT
TACTTTATCCGTAGCTGGTGGTGTGACGTTCCCTCCATATCCATCCCCTA
TGATCCTTCCCGTGTCGTCCCTATAAATGAACTATGAATTACAGTACCAC
TGATGTAATTCGTGTTTAGGCCATGGAGTCTCTTGTTGATGAAGGTCTGA
CCAGATCTCTGGGCGTGTCAAACTTCAACAGCCGGCAGGTTGACAGAGTA
CTGCAAGCGTGCAGAATCAAACCTATCGTTAATCAGGTGCGTTTAATGCT
AATGGCAATATTGCATACCACTGATTTTAAACGTTAAACATTGTACAATA
CTAACTATTTGTCACTGTTCTGCTTTTCACTAAATCACCCAACAATACTA
ATCATATCTAGATTGATCAAAGACTCTTTGTGATTTATTCAACCGACGTT
TCGGTGATCAGGGCAATTATGACCGGTTCACTCTGCAACGCAGCTGTAGC
TATTACAGATGCGGCCCTAAAAGTACTTGTAATCAAACTTTGTGTCGTTT
TTCTCCAGGTAGAACTGCACCCATACCTGCCCCAGCTGGACCTGATCAAG
TATTGTCAATCCAAGGATATCATCCTTACTGCCTACAGTCCCTTCGGCTC
GACCCCTGAAGTTGGAAAGTAGGTTGATCGTGTCCATTTTCCTCTCGTTC
AGACGAGAGAAAATCAGTGATGACATGATGTTTGTGATTTATGTTTCAGA
AGCATTGATGTCTCATAAAAGCATAAATGGTGTACAGATATATCAAGCTT
AATGACGTGGTGGCATATGTGGAGAAAATTTTGTACATTTAAAGAACAAT
TGAATCTCGTCCTGATGAGATGCCTTTTCTTTTTTACCTATTTCCTGGCC
GAGGAAAACTTTTGAGGATGTAGTGATCACAATGAAAACTATGTTACCGT
AGGTGACTGATGATGTTGCTTTCTTTCTTTCTTTCTTTCTTCTCACTGCA
TTTCTAGTGAGCCACGCTTATTGGAAGACCCAGTCGTTGTGACGATAGGG
AAAAGGCACGGGAAAACTCCCGCACAGGTCCGACTTCATATTTGTTGACT
ATGTCGCAGCCTATGAATTTGAAACACGGCATGATCTGGATCGAAAATGC
ACATTGAGAAAATGCCATGTGACCCTAACGTACTGATTTAGTAACCAGCG
ATCTATACTTCGATAGGCCCATGGGCTATCTTGTAGAGAAAATGGACGAG
AGAACACGTTTTCTCCTTTTCTTTTGAATTGATGATGAAGTGTTCCATGT
AGGTACTGCTCCGCTATCACCTTGAACGTGGGCTCTCCGTCCTGGCAAAG
AGTATTACCCCGGCCAGGATCCTGCAGAACCTAGAGGTACGTACGTATCG
TCATGCCCTCGCCTCAGATTCTTCACATTTGAATATATGGCTTTAGGGTG
GCGTTACATAGACATGTGTGAAATAATGGTATAGGGAATGTTTCAAGAAG
ATGTGATGCAACGTTCTCTTCCGTGACTTGTTTTCAGAGAATCACATCAG
ACTGTGCTTTCTCTGTAACAGTGATGTTCACCCCAGTATAAAAAAGCTAC
CTGATGGATTGCACATATAAGTAATCTGTTCTTCATTTTGTTGTTTCTTA
GGTGTTCGACTTCAGACTTACAGAAGATGACATCAGGAGTCTGAACAGTC
TGAATAGGAATCACCGATACGTCACGTGGCAATAGTGAGTATTTACTGAA
CGCATTTTCTGACGTGAGTAAACCCAGTGCTCTCCCTTCTCGGACCATCA
ATAAAACGTAGCAGGCAACCGCCACTACGAACGACAACAGGAATTATATA
TAACGTTGGGTAACATAAATTCGGGATTTTTCCGATAATGGTTGACTGAA
ATCAATCTAGCAGAACAATAAACCATCCTTTTTTTCTATTATTCTGTCAG
TATCATGTACTATCTTTGCACTAATCATATATATGGTAGATTTTGTCTCT
AGTCGTGCTGACACCATAATATTTCAACTTGAAACTACCGTCCGCCGCAC
GCACAATGACAGTGCTGTCGGACAGGGGTGAACATTAATTCGGGAGAGAA
GATTCGTCTTGAATATCTTACCGCTAATTACATTTTATACAGCAGCTATT
CGTTCCATCCTTGGCTTGAGGAGAGTGCTATGGATATAGACGTGTCCAAG
TAAAAAAAATACACGAAAAAACGGCCGTACCGCACACATCAGGCCTTCGG
GAACAACCCGTGTGTTGAGTCGGTAGAACGTCACTCAAAGTCAACCCCCA
CCGTCATGGAAATTTGTACATTATTTGTCGGGGCGTTAGCTGGATGCCGT
AGAAATGGTAATACTACTATGTCCATGTGTTTCTGCTTGTGCTAAGAGCN
CCCCACCGTCATGGAAATTTGTACATTATTCATCGGGGCGTTAGCTGGAT
GCCGTAGAAATGGTAATACTACTATGTCCATGTGTTTCTGCTTGTGCTAA
GAGCAAACTTTGAGGAAAATATCGCCATCAGTCCACTATCACACACAACA
TTTAGACAAAAAAGTGTTCCTCGCAAACATTTGTCGTCTGCCGAATAGCA
GGATTCTGGGTAACGAATATGGCGGCGGGAAAATTCACCGTAGTGCCGTA
GCCATTGGTTGTAGCAACAAAGAGGCGTTCTGATGATTAATCACACTTAG
AGTCCAGTTGTAGGTTAGCAAAAGAGATTCTAATAAGTTGTATTGTAAAT
AATTGTGTTGAGCAGGAAGCGGATGTGACATTTGTCTTATAAACCAGCGA
ACAACTATGCAGTATAATTCTCCCACGCAGCCCTCAGACTGTGACAATAA
GGGACGGAGAGTTTTTGACGTAGCCAACTTCTAATGCATGGTTATCGAAG
CTTTTCAGANTAATTCTCCCACGAAGCCCTCAGACTGTGACAATAAGGGA
CGGAGAGTTTTTGACGTAGCCAACTTCTAATGCATGGTTATCGAAGCTTT
TCAGACAGTGTTCTGAATACGTTAGTCTGTCAAGTTTGCATTTCTAGCGG
TATTACTGATGTTGCATCTAGCACATATCCCTAAATACCCCGTTTTCGAA
AAATCCCGAATTTAAGTACCCCGCGAATTTATGTTACCCAACGTTATATT
ATGTATTACGTTCGTGAAAGTTCTGACGGTAATACTTTTCAATTTACGGG
CCGATTTATACTGAACTACTGGCACACTAGTTTCTTATAGCCATACGTCT
TGCATTATAATGGTGTATTGCGTTTAAGCCATTTCACTTTTGTTTCAGCT
CCAGGACACATAAATATTACCCCTTCGATGACCAGTCAAGATCGGCACAA
TGACACTTGAAATATCACCCTACCCAAACTGGCCAACTGAATTATGTAAC
TATAATATCTGTCGTGACGATCAGTTCATAAAGATGTGTAAACTGTCATT
ATCTTTACTTAAAATGTTATATATATGGAGTACAATTATTGGGGTAGAAT
AGTTCAATTTCTGCCTCATTTTTATGAATATAAAATTCTCAAGGTTAGTT
TGTTGAACTGTACGACGTGGTCCATTATTAAAGGTAGCGACGTGCATCAA
TGCAGGTAGCTCTATACATACTATTACCGTCATTTACTGCAGACACATAG
TAGAATGTTATCTGTTTATTTGTTCAATACTTTATTTGAAAATCAACTGT
GGAGTTTAAGACACTGATAGCAATGTATGCATGTACGTGGATTGCTCCAA
GTGACGTGTCGACTAAATTTACATTCGTAGAAAGTCACATCCACCATGGT
TGATTATGCGGAGTCATTGAAGGGGAAGTACTTGTGGGTCTTGCAGCTGA
AAAGGGATGGAAAAGACTGTTACATATTGTGTATCATTATAGACGCAGAA
AGTTTGTGATAGAAATCAGACGCAAGTTTGCCATTTACACTGAATTTTCA
CAAATACCTAGATGTCTCACTACACTAGTAACTATAACAACGTTTGGTGA
ATCATAGACGTAACATGAAGAGAAGTACATCAAGGGGTTCTTACAATGAC
CAGTCAACATAGCGGTTCTTCCGGTCTAGGCTGCCCAGCGTCTTGATATC
GTCGGCGGTCAGCGAAAAGTCGAGAACCTGAAAAGAAGTATAAAAAAGTT
TCAATGTGCACGCAATATCTTCTGGATTGAGCAATAGGTCTATGAACATG
GCATCGTGATATG Coding sequence (CDS) from alignment at Sc0000294:296972..304634- >Blg02107.3 ID=Blg02107.3|Name=Blg02107.3|organism=Branchiostoma lanceolatum|type=CDS|length=969bp|location=Sequence derived from alignment at Sc0000294:296972..304634- (Branchiostoma lanceolatum)
ATGCCGGTTAACATCCCAACTATACTTCGATCAGGTGTCAGGCTGCCTAT
TTTAGGACTTGGAACATGGAAGTCCAAACCGAACGAAGTCGCCACAGCCG
TGAAGGTGGCCATCGGTGCAGGGTACCGACACATCGACACCGCGTGGAAC
TATGGGAACGAGGCGGAGGTGGGGCAGGGGGTGAGGGCTGCCATCAGGGA
CGGGACGGTGGAGCGGAGAGAGCTGTTCATCGTCACCAAGTGCACCTTTT
ACCTCATGTCTGTACAGCTGTGGTGCACGTTCCATCGGCCTGAGGACGTG
AAACTGGGCATAGCGGACAGTCTGGACAAACTGGGTCTAGACTACGTGGA
TATGTACCTCATGCACGGTCCGCAAGGCTTTAAGGGACCCAAGATACGCC
CGACCAGCGACAGTGACTATGATGATACAGACTATGTTGACACTTGGCAG
GCCATGGAGTCTCTTGTTGATGAAGGTCTGACCAGATCTCTGGGCGTGTC
AAACTTCAACAGCCGGCAGGTTGACAGAGTACTGCAAGCGTGCAGAATCA
AACCTATCGTTAATCAGGTAGAACTGCACCCATACCTGCCCCAGCTGGAC
CTGATCAAGTATTGTCAATCCAAGGATATCATCCTTACTGCCTACAGTCC
CTTCGGCTCGACCCCTGAAGTTGGAAATGAGCCACGCTTATTGGAAGACC
CAGTCGTTGTGACGATAGGGAAAAGGCACGGGAAAACTCCCGCACAGGTA
CTGCTCCGCTATCACCTTGAACGTGGGCTCTCCGTCCTGGCAAAGAGTAT
TACCCCGGCCAGGATCCTGCAGAACCTAGAGGTGTTCGACTTCAGACTTA
CAGAAGATGACATCAGGAGTCTGAACAGTCTGAATAGGAATCACCGATAC
GTCACGTGGCAATACTCCAGGACACATAAATATTACCCCTTCGATGACCA
GTCAAGATCGGCACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02107.3-exon-Sc0000294-1570713199:304493..304634 | Blg02107.3-exon-Sc0000294-1570713199:304493..304634 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:303571..303738 | Blg02107.3-exon-Sc0000294-1570713199:303571..303738 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:303026..303169 | Blg02107.3-exon-Sc0000294-1570713199:303026..303169 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:301399..301464 | Blg02107.3-exon-Sc0000294-1570713199:301399..301464 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:300899..301015 | Blg02107.3-exon-Sc0000294-1570713199:300899..301015 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:300517..300626 | Blg02107.3-exon-Sc0000294-1570713199:300517..300626 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:300108..300177 | Blg02107.3-exon-Sc0000294-1570713199:300108..300177 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:299799..299882 | Blg02107.3-exon-Sc0000294-1570713199:299799..299882 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:299451..299533 | Blg02107.3-exon-Sc0000294-1570713199:299451..299533 | Branchiostoma lanceolatum | exon |
| Blg02107.3-exon-Sc0000294-1570713199:296972..297886 | Blg02107.3-exon-Sc0000294-1570713199:296972..297886 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:296972..304634 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02107 |
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