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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:87215..95425- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02087.28 ID=Blg02087.28|Name=Blg02087.28|organism=Branchiostoma lanceolatum|type=mRNA|length=8211bp|location=Sequence derived from alignment at Sc0000294:87215..95425- (Branchiostoma lanceolatum)
GCCATGGTTACAATTTGATTTCTATCCAAGATGGCGGCGGCACCAGACAG
GAAAATAAACTCAGTTGACGATCATTGAAGACCATAAACCCCAGTTGCTG
GCCACGCTTACCCCATAAAATTCCGGTTTATAAGGTAAGAGGTGTTGCCC
TCTCTTCGTGAAATAGGTATGGTCACGGATAACTTTCCTCAAGGAGGCCT
AAACAACTTCACAAGTTCAGGAGTTTTACAGTTTCACTGACTGACTGAGT
GAGTGAGGATGTCTTTTAAAAAACTTCTGGAGATATAGTTTCATCTTGTA
CAGTGGTATATGTTGCAAGGCGTACACTGGTTATTCATTTGTGAGTACTG
TGTTGACGTGCATGTAGCTAAGGAGGCCTGTGACGTCCCGTTCACTACAG
CTTAGTCTGGCTATGCTATGAGGTATGGTTTGGAGAATGCCCCTCCCACT
TGTCACTGTTGGAAGTAGTAAAATAGTGTTGTGAACATAACAGATGTTTA
TGATATGACATTGATGATTGTTTCAAGAACAAATTTGCTTATATCAATAG
TTCAACAAAAATCAGCAGCAGAAGGGCGTCGCTATGGCCAACCAACCACA
GCCCGAGGCTGAGGACGACCTGCTGAAGTCGCTGGAGTCCAAGTTCTCTG
CCATGTTTGACTACGCACAGTGGCAGAGAACCAGAGCTGCAGTGGCCAGC
GCCAAGTCAACCAAGACAAACAAAACTGCACAGAGTCAGGCTACCTCGTG
TAAGTCAGGTATAAATGCTAGGAGTGGGATCGATCTTTCTAAAAATAATC
CATCATAGGGAGATCTGTGTACAGATGTTCAATTCGAGGAGAGTATAGAC
TAGAGTAGAGTAGAGTAGAGCAGAGCAGAGCAGCATAGAGTAGAGTAGTG
TAGCGTAGCGCAGCATAGAGTCGAGTTGAGTCTTTGACCAGTTGGTGATA
ACTGGCACATTCAGCATTGAGCAATGATATAATATCATTTATTGTGTACA
TATTATGCCTGGAAAAGGGTGGGATGTTTGCATGCATACCTAGTCAATTA
TGGGTTAGCTGGCATTTAGCTCTTGGTTACAAAATGAGTTCACAAACCTG
AAATTATATGCCTTGTTTTCCTTGGATGATCCTTTGGTCTACTTAGTTAA
ATCACTTTTGACACTGTCAACATAGTCTTTATTTAACTTCTCCATTTACA
AAATGGAGGGGGAGACAATACAGATGATTACACACCTCTGCTAGTTGTCT
CCCCCGCAACATACAAAATACATACGTAAATAAGAAGAAAAAATGTATAG
CTAGTAACTATCAAAATACAAAAATATACTATGAATATACTAATATGAAT
ACTATGACTATCATATATTCAAGTACAAAACAGCATAATGACAGCTTTGA
TTGGATTGTATGTGACCTTGCAGCCCGAGTGACACCAGATGAGACCTTGG
ACACGCGGACAGTTGGCACGGCCTGCTCCTCCACATGCAAACACTCCTGG
AACAGGAAGGACATGTACAACATACTGGATGAGAAGGCAGCAAAGGAAGC
CAGGAAGAAGGAGATAGAAGACAATATCATGAAGGTAAGAGATTAAAGCA
GTTACACTACACATGTATGTGTCATTAGATAACCCTTACGAAATAATGCT
GGTCAGATCAAGTGCAAATTTGAAAGAAAGAATATTAATTAGGACTTAAG
AAAATGTTACACGTGTCCATGTAAAACGTTGTTGTACAATGGGGAGAAGC
TGACCTTTTATTTATCTACATCATTGAAAAACCATCCTGACGTATCTACC
AGAATGAGTCACATTTGCTTATCATGATGTTATACAGGAATTGGAGTCTA
AACAATAAATCATAGTGTGTATTGTATTGTCTGTTACAAGAATATCTTCA
GAGTTAGACAATCTCACACAGCCTATTAGAGTGAGACAAACCACCTGTGG
GATTTATGTCAAGGAGTAGTTTATGTTAATTAAAACTCATACTGTTATAT
ACGTAGATATAAAATGTACTGACAGCAAACTTAAGATGACTTGCTTGCCT
ATTGCATGCTGCTTAAGTCTCGCATTAAGGAACTGCTAGAATACTCGGCT
AGGAAAAGAGCTGACAGGCTCTTCCAAGGGCTTGATTCTAGCGAGGTTGA
TGACATAGAGATGTGTAGAATCAGGACATTACAAGTAAGTATAGGGTGTC
ACTGTGGTATGGTAACAGGTGTTGTGGTAATATGTGTATTGTACTTCTAG
AATGGAACCTTGGTGAGCACCATAGCATTAACCCAGAGACTTCTATCAGC
TTAAAGTTGGGTGTATCTGATCACTTGTGAATTGTGATTCATTTCAGTGT
TCTCACCAGGATTTTTTCACAGCATAGGGGTCAGGTACAGAAGGCCAACT
TAACGCGGTGCAAGTCACGCGTGGAGTGACCAGAGTAGGGAGTCCGGCAT
GTTCTCCCGGAAAATTTGTGAATTCATAACCCAATAAGACATTATTTCAT
GCATTTTGAGGGATAAATTTTGTGAAGTAGACTTTTTCCTCTGTCACAGC
CTCATTCTAAAGCCAAATATGAACTTTTTATAAGATTTATGAAGGGTCAC
AAGGTTTGTCCCAGAAAGAAACACCCCTATGCTGGTTGAAACACAGCATA
GGGGTCCAGATCACAGCATAGGGGGTCCAAATCACAGCATAGGGGGCCCC
TATGCTGAAAAGGCCTGGCGAGAACACTGCATTTGTGGTAGCTCAAGTTA
CCATCTCAAGTCCCTTCAGTGCCATTTGACACAAGACACCTCTGTAATCA
TGGTAGAAATAAGTGTCATACAGACTGTATCACTTTTGTGTTTGCACATT
GATACTGTTAAGTTGAAACACATGAAAATGTGCTTATTTTTTCACTGTTA
TTCCTTACAGATGAGAATAAAAGCAAGAATGCAAACCATGGATGAGTACA
CAAAGAGATACGAGTATTTGTATCCTTTTGGTTCAAGACCTGTCAAATAT
AGCATTGGTGTAATTACTATCACAAAAGTCAAGCATCAGTTGATTGGAAT
GTGCCCAGTACACTCCCTTTTGAGCCCCAATGTTTCAGATGTNTTGAGCC
CCAATGTTTCTGATGTGTGCATTTTGCTCAGCAAATCTATTACTTTTTCC
TTGACTGACTTCTTGTTCATCAGATTGTCAGAAAATAAAAAGTTGCAAGC
AGAAATTCAGGGAACAGAGAAGCAGACTGTAAGTACATATGGTTTACAGT
TGTTTGAAACTTCAATGTATTGGTGACTGTTGGGGAGTACTCAGTGATAT
AAAACAATGTTTGCAACTATTCCATTTTCCAAGTTGATAGATGATTGATT
TGTACGAGGTATGCTAGCTCCGATTATTTAAACTCATAATTCTGCTACAA
TGATGTTCCCCTTGATAAGGCCCACTTCTTTTCTAAAGATTTGAGAAATG
AATTGTTAATATGTCTAGTATAAATTGATAATTAAACTCTTTCACTTCAT
TTTGTTCTCACAGCATAGAGATACAACAAAACTCCTAAGAAAATATGAGA
AATGCCGGGTAAGTATGTCTACTTGTCTGTTTCATATTCCTTATTGTGCA
TGTAGACAGTGACTGCATTGGAACTTTGTAGGTATGTGTAGCTATTTCTT
ATAAGTTATACATGTATTGAAGGATGAAGTTCTGACTTTGATCTCTAGGG
GGCAGTATCTACAATAAATAGCAAGTTTCATGAGGACCTGGAGTCAGCCC
AAGCAGATCTCGAGGAGACAACAGAGAGGCTAAACAGGGATCTTGAAAGT
AAGAAATGACATTTATAGTCGTCTTACCTGAGTTATCATTGGTTTGGTTT
CTTCTCATTATATATTGGAAGTGTCAGCTTCATTTGGAAGTAAGCCAATT
TGGGTAATGCAATAACTCCAAAGATAGTAATGATGCTCCAATCCAACAAT
GTTGCAGATTTGTTTATTGACCATAGCCAACTTTCACCTACACCCTTGTA
ATATCGATTTGCAGACAATACTTCATACTTTCAGTTGCACCACCTATCAG
GACTGTTAGAAACTGCAGTTTGTTGCTTTACAAAATGTCTTACTCCCATG
TGTTCTCTTTAACAAACCCCCTGCAGATCTTCATGGAGACCTGAGGGCAG
TGGAACACAGACTAAGATTGAAACAGGAAGAACTCCATGTGCTGGTCACA
TACAAGGACAAGGAATACCCATCCAAGGCACTTAAAATATCAGGACTGGA
GACGGAAATTAAAGATCTGGCTGCAGAGCAAGAGGTTTGCAACTTTTCTT
TTAAATCTGCAGAAGCACAGTTACCTTAGTTCATGTACACAAAAGGTTTA
TTTAGCTCTAAGAAAATGATGATGCAACACTGCATGATAGACCTCAAGTA
CGGCTGTGACATGCCTTAATACCATTGAAAGCTCAACAACATTTTCGTGT
ACAGCTGTTCTTTCTTTATGATGGACNATGAAGTTCTGACTTTGATCTCT
AGGGGGCAGTATCTACAATAAATAGCAAGTTTCATGAGGACCTGGAGTCA
GCCCAAGCAGATCTCGAGGAGACAACAGAGAGGCTAAACAGGGATCTTGA
AAGTAAGAAATGACATTTATAGTCGTCTTACCTGAGTTATCATTGGTTTG
GTTTCTTCTCATTATATATTGGAAGTGTCAGCTTCATTTGGAAGTAAGCC
AATTTGGGTAATGCAATAACTCCAAAGATAGTAATGATGCTCCAATCCAA
CAATGTTGCAGATTTGTTTATTGACCATAGCCAACTTTCACCTACACCCT
TGTAATATCGATTTGCAGACAATACTTCATACTTTCAGTTGCACCACCTA
TCAGGACTGTTAGAAACTGCAGTTTGTTGCTTTACAAAATGTCTTACTCC
CATGTGTTCTGTTTAACAAACCCCCTGCAGATCTTCATGGAGACCTGAGG
GCAGTGGAACACAGACTAAGATTGAAACAGGAAGAACTCCATGTGCTGGT
CACATACAAGGACAAGGAATACCCATCCAAGGCACTTAAAATATCAGGAC
TGGAGACGGAAATTAAAGATCTGGCTGCAGAGCAAGAGGTTTGCAACTTT
TCTTTTAAATCTGCAGAAGCACAGTTACCTTAGTTCATGTACACAAAAGG
TTTATTTAGCTCTAAGAAAATGATGATGCAACACTGCATGATAGACCTCA
AGTATGGCTGTGACATGCCTTAATACCATTGAAAGCTCAACAACATTTTC
GTGTACAGCTGTTCTTTCTTTACGATGGACAGAAATAAAACTGCATATTC
CTCCCACAGGAGGAGCTGTCTGAGTTGAACAGAATCATCCACATTGAGAG
AACAAGTTTTGAGAGACAGAAGGTTGCAGATAACCAGGCCATGACTTCCA
ATGTTACAGAAGTAAGTAGTACATTCTTGTGCTATGGCTACAAGTTAATG
TTTAAAGGCATCAGGGCTGCAAAGGTGTTGTGGTGATGGCATCCTTTTCT
ATTGGATATTTGGCATGTTCTTCCTGCAAATTTGGTCAAGTACATACATA
CAGATTTGATACGAAGCATTACAATTTCTGTATTTTAATTCCTCCTTTCA
CCATGCTTTGGAAAATTGCTATAATGATGTACTTAGTATATCTATTTATC
ACATGTGTACATGGCATACTCCTGCAGGCACTAGCAGTATTAAGGGGTGC
AAAATAGACTGACCCTTTCCCATTTCCCCACAACAGCTGATACACCAGGC
CCTTTCTGACAACCCTGGTAGTGATTCTCAGGTAGTGTTGTATGGTCCCC
ATGTATCAATGGTGGAGGCACAGAACTTACAATATTGTACTTTACTACTA
ACACTGTGGTGATCATGCCAGCAGTTCATTCAGGAGTCTGGCACAGTTAT
TGATTATATATGTTCTTGCTAACCTTTCCTTCACAAAGGATTACAGGGGT
TTAACAGGTTGTAACACTAAATAATGCATCTGGTGTCTAACATGCATGTC
AGACCAAAGGTTCAACGGTTATGTATTGAAACAAAGACTGCATTTCTTGC
AAGTCATCTACATTTGTATTCATTTTAGCTTCACAGGTAAACTTTATGAG
ACTTCAGAACAAAAGCTTTTTGTATCAACAACAGGAAAAAGACCCTCCGA
GTACATTTCCTTCTGAAAACTGATATGCCTCAGGTGGAAACCCACACATT
GCCAGTTTTGCTAGTGCCACACTTACTGTCTTTTTTCTTTGGTTAGAAAT
CCATATCATCCATGCACGGCAGCCTGAAGGACATGGCCTTACAGAATGCT
GTGATGAAGAAAGAGATTGAGGTGCATCGTGGGGAGAGGGAAACCCTGAA
GCAGGACATCTCACTACTGGAGGCTGAACTCAAACAACTCATCAAGGATC
CCAAGTCACAAGTCCTTCAGCAGATATTCCCTCACTTCTTCCCGAAGGAA
CCAAAGTGAGCTCATTTGCATTAAGATATATCTTAAAATGTTGGTTCATG
TAGCTGAATACTCTCTTTATACCAGTAAAGTTACTCAGTTATCTTTTTGT
TACTGGGACATGCTCACAAAATATAATGTCTTTAATCAATATATCTTTTG
TTCATATTTCTGCAGATGTACCCCAGACATGGATGTAGTGCTGGACATCC
CCACACAGGAGTGCCTACCTATCTAACAGTGCTGGTGACAGCAGTTTTAA
ATAGTATAAAAGTGTGGATGGCAATGTGAAAATGTAAACCTGGTCTGCTA
AATATATTGAAATTAAAATTATATAATGGATATCTGTACAACAAATGATA
TTATCACATACATTATGATTGAATATGGAACATATCACTAGATATTACTG
GTACTAAATAGTCAAGCTGCTATATTTTTTTGTTTGAATTCTAAAGAAGT
GCAGTCCAAAATTATGATAATGCATTATGACTGATTCTTTTAATGAAAAT
GTATTTTATGAGATTTTATGAGCAGAATTTTTTAATTTCTGTTATATGTG
TAAGCCTGAGTGTCATCCTAGTTAGTTTACTGGGGCTCACATACTCTCCC
CTTACCAACATATCATGCAAGTATATATGCTGAAAGCAATAAATTCATGT
GTTCACAGAAATATGCCTTTTCATCATTACATACTATAGTACTGCTGATA
TTCACTGAACCCTTTTTCATATGGAACAATCACGTGACAGTTAAAGTAGC
TTCATATTAAATTTTTGTTGGTTACTGGGCTAGACAACAGGGAGAGGGTT
TCCAAGCTTTTATACTAAACCACCTAAAACTTGTACAGCCTAAAATTGTA
ACTTGCAGTGACTTGTTTCTTGAAGGTATAAAATGGAAGAACTGATCCTA
CATGTTAAGCATACCTGGTGGTCCCAAGTTGCTTTCAATCCTAAAGACAT
TCTGGGGGTATACAGCAGTAAAAACCTACGTACAACACTCAAACAATAGA
GACAACAAGGAGGGGAGAAATAGAAGTTTATTGGAACTCATATTTGTGCC
TATAATCACAATCATAAGAATATTGTACATGGTAAGACAGGAATACACCC
CAAGTGATAAGTCTGCCCACTTACACCATCNTACACCCCAAGTGATAAGT
CTGCCCACTAACACCATCTGAGTGAACAGTGATGCTGTCAGGAACAGTTA
TCGGCAACCAACAGCAGCAACCAAAAGGGCTTCAAGATGATAAACACACT
GTAAGCATTCCAATCCAAACAATCTGGGAGACAAGTAGCCTGCAAAGCAA
CCACTGTCATGATCCTGGCTTCTGTTTTATGTCCCTATTTCCCTAATACA
CTGTTTTCTGTCAATAGAAGGTATGATTTTCAGACATAAGGCTCTATGGG
ATTGATGTACACCAGAGGTGGGGCTAGACTGTGTTATGGATGGTTCATTT
CCACTTGTTGTTCTCGTAGTCCCACTTGGATGCTAGGCCTTCTACAGGGT
TGTTGCGCATCTGTAGCTGTTTCTTCATCATGGCCTCCTGCCACTCATAG
TTACACGTTTCAGGCATCGCAGGCATGGCTGTGGAGAACAACAGGTGATA
AGTATCATACCACACAGAGAATATGGACAAAGTTCATAAATATCCAGTAA
ACTGTGGCAATGACAAGCTCTTCTGTTTAATGATTGACATTTTACCAATA
CCTTATAAATGCTTAAACATTCTCCATGCTGCCTTAATCTGTAACCAATA
GGGAATTGGGT Coding sequence (CDS) from alignment at Sc0000294:87215..95425- >Blg02087.28 ID=Blg02087.28|Name=Blg02087.28|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000294:87215..95425- (Branchiostoma lanceolatum)
ATGGCCAACCAACCACAGCCCGAGGCTGAGGACGACCTGCTGAAGTCGCT
GGAGTCCAAGTTCTCTGCCATGTTTGACTACGCACAGTGGCAGAGAACCA
GAGCTGCAGTGGCCAGCGCCAAGTCAACCAAGACAAACAAAACTGCACAG
AGTCAGGCTACCTCGTCCCGAGTGACACCAGATGAGACCTTGGACACGCG
GACAGTTGGCACGGCCTGCTCCTCCACATGCAAACACTCCTGGAACAGGA
AGGACATGTACAACATACTGGATGAGAAGGCAGCAAAGGAAGCCAGGAAG
AAGGAGATAGAAGACAATATCATGAAGATGAGAATAAAAGCAAGAATGCA
AACCATGGATGAGTACACAAAGAGATACGAGTATTTGTATCCTTTTGGTT
CAAGACCTGTCAAATATAGCATTGGTGTAATTACTATCACAAAAGTCAAG
CATCAGTTGATTGGAATGTGCCCAGTACACTCCCTTTTGAGCCCCAATGT
TTCAGATGTNTTGAGCCCCAATGTTTCTGATGTGTGCATTTTGCTCAGCA
AATCTATTACTTTTTCCTTGACTGACTTCTTGTTCATCAGATTGTCAGAA
AATAAAAAGTTGCAAGCAGAAATTCAGGGAACAGAGAAGCAGACTCATAG
AGATACAACAAAACTCCTAAGAAAATATGAGAAATGCCGGGGGGCAGTAT
CTACAATAAATAGCAAGTTTCATGAGGACCTGGAGTCAGCCCAAGCAGAT
CTCGAGGAGACAACAGAGAGGCTAAACAGGGATCTTGAAAATCTTCATGG
AGACCTGAGGGCAGTGGAACACAGACTAAGATTGAAACAGGAAGAACTCC
ATGTGCTGGTCACATACAAGGACAAGGAATACCCATCCAAGGCACTTAAA
ATATCAGGACTGGAGACGGAAATTAAAGATCTGGCTGCAGAGCAAGAGGA
GGAGCTGTCTGAGTTGAACAGAATCATCCACATTGAGAGAACAAGTTTTG
AGAGACAGAAGGTTGCAGATAACCAGGCCATGACTTCCAATGTTACAGAA
AAATCCATATCATCCATGCACGGCAGCCTGAAGGACATGGCCTTACAGAA
TGCTGTGATGAAGAAAGAGATTGAGGTGCATCGTGGGGAGAGGGAAACCC
TGAAGCAGGACATCTCACTACTGGAGGCTGAACTCAAACAACTCATCAAG
GATCCCAAGTCACAAGTCCTTCAGCAGATATTCCCTCACTTCTTCCCGAA
GGAACCAAAATGTACCCCAGACATGGATGTAGTGCTGGACATCCCCACAC
AGGAGTGCCTACCTATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02087.28-exon-Sc0000294-1570713199:95292..95425 | Blg02087.28-exon-Sc0000294-1570713199:95292..95425 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:94677..94875 | Blg02087.28-exon-Sc0000294-1570713199:94677..94875 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:93842..94002 | Blg02087.28-exon-Sc0000294-1570713199:93842..94002 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:92198..92515 | Blg02087.28-exon-Sc0000294-1570713199:92198..92515 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:91868..91912 | Blg02087.28-exon-Sc0000294-1570713199:91868..91912 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:91628..91727 | Blg02087.28-exon-Sc0000294-1570713199:91628..91727 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:91142..91299 | Blg02087.28-exon-Sc0000294-1570713199:91142..91299 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:90015..90116 | Blg02087.28-exon-Sc0000294-1570713199:90015..90116 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:88971..89179 | Blg02087.28-exon-Sc0000294-1570713199:88971..89179 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:87873..88810 | Blg02087.28-exon-Sc0000294-1570713199:87873..88810 | Branchiostoma lanceolatum | exon |
| Blg02087.28-exon-Sc0000294-1570713199:87215..87833 | Blg02087.28-exon-Sc0000294-1570713199:87215..87833 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:87215..95425 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02087 |
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