Blg02031.7 (mRNA) - B. lanceolatum

Overview
NameBlg02031.7
Unique NameBlg02031.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000592:82437..89068+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02031.7 ID=Blg02031.7|Name=Blg02031.7|organism=Branchiostoma lanceolatum|type=mRNA|length=6632bp|location=Sequence derived from alignment at Sc0000592:82437..89068+ (Branchiostoma lanceolatum)
CATAGCGATCAAATTATTCACCAACTTCATGCTGGAGGCGGATGATCACG TGGCACAGTTGTTTACTTCCGCGATCAGCTGATCGACAGTACGTCAGCAA AGGAAATGCTGACATGAAAATCTCCAGGCGGCGTGACCGTTAGCGGTCCC TGCGATGATCAACGGATTCCATGGTTTTGTCGCTCTCAGGATCGGGGACA TCGCTATTAAAGGACTGCCGATTAATTGCTAGCTTGTTTGGTCAGAACTC TTTTGGGGTTGGATCACTCGCCTGACTGGAAAATAGTTACGACTTTCAAG TCAACAATTTCTTACAACGGAAAGATTTGCTGACCCTGTCCGTCATTGGC AACAGCCAAACAGAGGAAAACCTGGCATCTCTTTGTTGGGTGAGTCCAAA GTCATTGTTAAATCTTTTAGCCATTTTCAAGTTTGACCTCTCGTGTCCTC GGGTAGATCTGCTTTCCTATTCTGTCCGCGTGGGCCGTTCAGTTGGCTGT TGTTTACCGTGCACGGTCGCCATGTTCCCACTGATTGCGTCATCACTCAA GCATGGCCTGCTACGGCCCTTCACCTAGTTTTACCCGAGGATGTTTAAAA TCTTTAAGATCTCCTAGTTTCTACTCGTCGAAGATAAATAATCGAACCTG TTTTAGTCTTGCACTTATTGCCCACGATGAGGGTGCTTCGGTGATGGTGC CTACTAGTACTGAACATGACTTTAAAAAAATGTCATGGCAACGTTACAGA AATGAGAACACGTAAAGCCCTGAACTTGACTAAACACTAAACTAACAAGA GTTCGGAGACCTCATATCTCGATGAACAATTCTATTTATGCAAATCACTT ACACATTTACATAATATATGCTGAATCATAAACACCTTTATCTTACGTAC ACATGTTGCAATATTGACAGTCCTATAATTTTACAATTAGTTGAATTTGG GTGTTTTTGCATTGATTATTCAAATTAGGAATTTATTTGCATGATTATGC AAATGAGGAATTTATTTGCATAATTGGTATCTGTTGATGCTCCACTTTCC ATAAACTACATATGGTACATGTATTTGAGTCTTATAATGGAAAACACTGC AAATATAGATTTTCCTCATTAGCTATGCAAATTAAGTCCCAATTAGCATA ATTTGCACTTCATTGTGTATATCTCTGTCTAAGCTACCCGCTTACTAGCT ATCTGCCACCAAAAAAATCAAGACCATACCACGTCCATGTCAAAAGATAC AATAATTGAAGTTCTGCTGCAGTACCAAGGTCACATTCCAGGGGGCCCAA AATCGACCTTGAATTTCAGCTTTACAACACCCGCCCACATACCAAATATC ATTGTAGTCTATCAAGAGGCTCTTGAGTTATGCTGACTAGAGTAATGCGG AAACACAAACAGACAGACAAACAAACAGACAGACAGACACACCCAAAACT ATACCTCCATTTTTCATGGGATAACTAAACACCTGGGCCCTACATGGCCA AGAACCGCTAGACATAGGCAAGCTTGGAGTCCGACAAGGAAGGGGTACCG GTTCCTCCAAAGGAGCGACAAGGATAACACCCTGAAATGATGGAAGCGCT CAAACGCTATGTGTCACGGCTAACGTGGACTTTGAAAACAACGTAAGTTG ACCTTTGTCCAGTTAACGTTAGGATTGCGCCATCTATAGTTAGCGAGGGG TCATTAAGTGGTGTCTTTACGGAAAAGCATGCCAGTATAACAGAAATTTG GTATTGTTTCCTGTAGATAAACACACATATACATGTATGTCACAGTAGAA ATTGCGATTCAGTACAACTGTCAATTGTCCTAGAACAGACTGCAATCGGT AGCCTGAGTGTCATCCTGTTTCAGTTCCAGGCTCTACACGTGAAGGTAGA GCCTGGAACTGAAACAGGATGACACTCAGGCTATGCAATCGGGATCTGTC CTAGGACAATTGGCAATTCTACTCAGTGCAGATTGCGATTGCAATCTGCC CTAGGACAAACTCCGATCCAAACTCAAATGATGCTAGATAAAGCTAGGAA ACAGCAATATTTTTTTTGCAAACCATTATTTTGTTTAGTATTACTACAAA CCTACTATATATCACTTATTACCAACTACATTCAACATGCTAACAGACTT GTGTCACTTCTGCAACGTTAACTTCACTCAAGGCTGCCGCACTAGAGTCA AATTGTCATCGCCATTTAGCGATGCAGTGGCCAGTTCTTCTTGCCCTGGC TAAAACTGTTGTTCTGCTGTTCTACCAACCTTTAGAACTCTGCTTTCTAC TGCTGCTCCTCTGCCATTACTGGATCGATCACTACTTCATGCTATCAAGT TGACATCAAATTTGGAACTGGCTAGGGAGGGGAAAATTAGCCATTTTATA CCTTGGGGGTCGTGCATCGCACTTCATTCATATAGTAGTACATGAGGTGC GACACTGTGATTGATATTTTGACACCTGTTTGATCACCTTCCAATAGTTA TTGTTCTAAAGTTGTGCAATAATTCAGTATGTGGAACATTTACCATAGAG ATTAATTATGCGAATATGGACCTGATTGGCATATTTAATTCCTTATTGGT AAATAATGGGAATTTCATACATACACAATGAGATATGTTAGTCAAAGGTG TACCTTGCCATGCATAAATCATGTAAATATAAACGTGGAATTCTGCCAAC GGAAAGGACCTTTACACCTGCAATATGTATAACCTCGGTAGAGAAGACTA TCATTTAAAGTAGATTCAGCCGTATTTGCACACTCGATGATACAGAGTGA AAGAAAAGTCTACAGACGCTCTTGATCTTTCATGAGGTATGTAAGTTGAC AAACAAGTATCCAGAAACACATTGCAAAGTACATTTCTTTTAAATTGATT TTTAAAGAAACACGTTATACTTATCTATCGCCCACTTCTGTATTTCAATC CATCCACAGTACCATTTCCTTACATTTCCATCCATTTTTCTTTCAATTTG CTTCACTTTTCACGACCTATATCCCATTTTCGGTATGTTGACAGAGAGTA ACGAAATGTCATGATTTTTTCCTCGAAATAAGGCTAAAATCAACGCGTGC GCTGATCCTTAAAATCTGCTTACTCGTTGGGCGTAATACTAGTTGTATAA TTGATACGCCGTATTTAATGGTAGATGTCAGTTTCCACTCATGGACCATT CCGTCTCTTTCATACAGGTGAAGCTAACGGCTTAGGGACGTCCTAACGAC GACGTTATAATGCCAAGGAAGGTAGTGAACGTTCTCTTAACCGTAGCTGT ACTTGGAACAATTATAGTCACATTTTACTCGTATTACAATGGTGTACCGT CCAGACAGATACTACGTATATTTGACTCGTCGGTGGAGAATGATTACTCT GAAAGCGAGACAATGCAATTTCATGCTAAATACATGAAGGGACATCATGC AAAAGGGGATGTTTCTGAGACAAACGGACCTACTCAAAAACCATACCACA ATTGGACAAAAGCATCAACGGCGATGGTAAAGAGAAAAGGCGTCTCATTG GAGGAGTTTAGGAAGACAAGGTACTTAAGGTTTAACAAGACTGCACCCCC GTGGTTCTCCCGAGAGGACGTGGAGAGATTGATATTTCTGGCTACAGCGA ATATTTCGCATGTCCTTCCCCATCCGCATGCGGCCCTCAGCCCCATAGTG TTCGATGACAATCGCAACAAGACGCGCCTAATCTCTGACACGGAGCAGTG TGAATCTCAGTGTGGCTTATTAAAAAGTGCCATGGACATCTACGAGGTGC TTTCCTTTCACCTAGACCGTGTTCTTGAACTGAACCGAACATTGCCAGCC ATCGCCCGAAAATTCCGTGGGCTGTCCGATCCTGGCTACCGTTTCCGGGA CAGTAAGGCACATCCCCTCATCTGGTGGGACCCGGACATCGCGCATGGGG GCACGTTCCAGAACGATCAGGTCTGGATGTACATTCATACTTATCACTTC CGCTGTATCCGATGATCCTTTCCTTGCACTTCTTTATTTAGTAAGCACAT TTTTTCAGCTTGACACGGCGGACGGCGAATTGTTTCACATCATCAGTACC AAAAGAAGCTTGACCTGTCTGCTTTTACAGCATTTCGACTTTTTTCTTTC CCCTTGGCATATGGGTGGGTTTTGAATGCTTGTAGGGGTGTGTTCCAGTT TCCAAGCAAATATTCTATTATTATTTTTTGGTACAAATTTCTTTTGTGCA AAACATTTTCCCGCCGTTCCCGCACTTTACAGCCGCCGTTGGGGCGGATA CAAGAATGGATCTCAGGCTAATGTTACCTCACAGTACGCTTGTTCTGTTC ACCTGCCATCCCACCCCAGAACTCCCTCGAGCTGAGCTGGCTGAACTACA CAGCTGTCCTAAAGAACCGGTGCTGGGCGGACAGAACGACCCCTGACCCG GAACAGTTCTGTACCTCCGTCAAGCATATTGAGTGGAGCAAGCTTGCCAT GTTTGATTTCCTACTGCAGGTGAGAACGACAGTCGGTTGGAAGCACTGAG AATCATGCTATAACGTATCGCGCCTTACGGTGTAAGTCTTTGACAAACGT GACATGGTCGTACTAAACCTAGTTTCTTAATATAATTTTCCCCTTTGTAT CAACTCTGCCATGTGCCATTTTTCAAAATTACTCGAACATTTAATACAGG TCTTCGACCGTCTAGATCGAAATTGTTGCGGATTCAACGAGACGTTAGAA ACCGAAGAGGAAGCATGTTTTACAGGTATGAACAAGAGTCTTAAGACCCC AAATCTCCATGAAATTTGTTTTTATATGTGACGATTTCTATTTGCCCAGC TATTTGTTGTTGCTGCTGTTTGTTGTGATTTATGTGCCATAGGTGGCTTG GGGAATTCTTATCCCAGATTCGAACCCAACAGGTGGCCGTGCCAGCTGTC ATAGTATACCTACAATGGACAAATAGATTTTCCTCATTACTTATGCAAAT TAAGTCCCAATTTGCATAATTTGCAGTTCAGTTTGTACATCTCTGTCCAA CCTACCTGCTTATGAAATAACATGAAAATCTGTCGATCCTTTCTTCAGTT ATTCTCCTTGGAAGATTTTTACAAGTACGCCATTGCGGGTCCAGTGACAC ATACCAGGGGGCCCAAAATTGACCTTGACCTTTCTTCTCCCAGCACCTGC CAACATACCAAATATCATTACAATCCATCCACACGTTCTTCAGTTATGCT GATTTTACGTATCCGGTGACACAAACATACACACACGGTGACACAAACAT ACACACACGCGCACACACACGCAAACACACTGGATTTGCATAATTTGCAA TTAAGTGTGTACATCTCTGTCCAACCTACCTGTGTACCAAATAACATGAC AATCTGTCGATCCTTTCTTCAGTTATTCTCCTTAGAAGATTTTTACAAAT ACGACATTGCAGTTCCAGTGACACATACAGGGGGCCCAAAATCGACCTTG ACCTTCCTCCTCCTAACACCTACCCACACGCAGGGAATTTCCGGTACACG TGATAACACAAGCAACACGTGTAACCCTTGTGCCAACTGAGGGTAAAGAA AATATCCTTATTTTAAGGCAAAATTATGTCTTTTCATTTAGATGGCAGGC ACCTTGAGTGTGAAACTCCGGAGGTGCTGATGCTCGTACATATGCTGACT CGGAAGTCAGACCGAAGTCGTCTCGTTTACATCGACAACGCGGGCAGACC GTTTCGCTCCAGGAGAAACCTAGACTGGCGGTTGCTACAGGGCATAGATG AGTAAGGGTGAACTTACACTTGTTTTTGGCGAAGCTTCAGGGGTGAGCTT AATGATGCATATTTATACGTGCGATTGCCAGTAATTCCCGGAATTGCAGA GGAATTTTTGTGATTCGTCTGCGCAATCTCTGTGGACGCCCGCCTGGCAC TCAACACCCTGTTAGCAGATCTAGCACGCAGGCCTCCCGACAGATGACCT ACTTACGTGGTATCCAATTTCGTATGGGTGGGAGTGTGTCAGGGGTCTCT CCGGACACCGAATCGACATCTATTCTAGCTTTGAAACGGCTTTTAAACCC ACGCGACCCATTTGGTCTAATATCACAAGAACGTTCTGAACATCAGCTCT GTGGACTCGAGGAGCTCAAAGCATTCATAGAAAGGCAAAGTTTCTTTAAC GAAACGACAAAGAACTTGGTTACCCCTTGGGCAGTCTGTACTGAACGTTT TACGTAGAGGGGTGCGGTGTCGGAAAAACAACAGTAGCTCCTCAAAAACA CAACTTACAGAGCCAGAATAACAACCAAAACCATCCTGGGAGCCCCAGCA AACCGAATATCTAAACGGCTGGCCTAGATTCTCACTTCACCCATCCAAAA ATGGCAACATGATAAAGGACACTAGACCGGGAGCGCGCTCCGGCCTTTCT ATATCTGCTTGGAACTCTATCATCACAAGAACGTGCTGAACATCACCTCC CCCTAGCCTCCGTTGCAGGCTTCTCCCACCGGCGATTTTTTTCAACTTAT CGGGCCAGATTCTTTGGCTGGGCGGCCGTATCTGCTTGGAGACCGTATCT GCTTGAGGCCCCGTATCTGCTTGGGATCCTGT

Coding sequence (CDS) from alignment at Sc0000592:82437..89068+

>Blg02031.7 ID=Blg02031.7|Name=Blg02031.7|organism=Branchiostoma lanceolatum|type=CDS|length=1101bp|location=Sequence derived from alignment at Sc0000592:82437..89068+ (Branchiostoma lanceolatum)
ATGCCAAGGAAGGTAGTGAACGTTCTCTTAACCGTAGCTGTACTTGGAAC
AATTATAGTCACATTTTACTCGTATTACAATGGTGTACCGTCCAGACAGA
TACTACGTATATTTGACTCGTCGGTGGAGAATGATTACTCTGAAAGCGAG
ACAATGCAATTTCATGCTAAATACATGAAGGGACATCATGCAAAAGGGGA
TGTTTCTGAGACAAACGGACCTACTCAAAAACCATACCACAATTGGACAA
AAGCATCAACGGCGATGGTAAAGAGAAAAGGCGTCTCATTGGAGGAGTTT
AGGAAGACAAGGTACTTAAGGTTTAACAAGACTGCACCCCCGTGGTTCTC
CCGAGAGGACGTGGAGAGATTGATATTTCTGGCTACAGCGAATATTTCGC
ATGTCCTTCCCCATCCGCATGCGGCCCTCAGCCCCATAGTGTTCGATGAC
AATCGCAACAAGACGCGCCTAATCTCTGACACGGAGCAGTGTGAATCTCA
GTGTGGCTTATTAAAAAGTGCCATGGACATCTACGAGGTGCTTTCCTTTC
ACCTAGACCGTGTTCTTGAACTGAACCGAACATTGCCAGCCATCGCCCGA
AAATTCCGTGGGCTGTCCGATCCTGGCTACCGTTTCCGGGACAGTAAGGC
ACATCCCCTCATCTGGTGGGACCCGGACATCGCGCATGGGGGCACGTTCC
AGAACGATCAGAACTCCCTCGAGCTGAGCTGGCTGAACTACACAGCTGTC
CTAAAGAACCGGTGCTGGGCGGACAGAACGACCCCTGACCCGGAACAGTT
CTGTACCTCCGTCAAGCATATTGAGTGGAGCAAGCTTGCCATGTTTGATT
TCCTACTGCAGGTCTTCGACCGTCTAGATCGAAATTGTTGCGGATTCAAC
GAGACGTTAGAAACCGAAGAGGAAGCATGTTTTACAGATGGCAGGCACCT
TGAGTGTGAAACTCCGGAGGTGCTGATGCTCGTACATATGCTGACTCGGA
AGTCAGACCGAAGTCGTCTCGTTTACATCGACAACGCGGGCAGACCGTTT
CGCTCCAGGAGAAACCTAGACTGGCGGTTGCTACAGGGCATAGATGAGTA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02031.7Blg02031.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02031.7-exon-Sc0000592-1570713199:82437..82825Blg02031.7-exon-Sc0000592-1570713199:82437..82825Branchiostoma lanceolatumexon
Blg02031.7-exon-Sc0000592-1570713199:85654..86406Blg02031.7-exon-Sc0000592-1570713199:85654..86406Branchiostoma lanceolatumexon
Blg02031.7-exon-Sc0000592-1570713199:86806..86955Blg02031.7-exon-Sc0000592-1570713199:86806..86955Branchiostoma lanceolatumexon
Blg02031.7-exon-Sc0000592-1570713199:87136..87211Blg02031.7-exon-Sc0000592-1570713199:87136..87211Branchiostoma lanceolatumexon
Blg02031.7-exon-Sc0000592-1570713199:88078..89068Blg02031.7-exon-Sc0000592-1570713199:88078..89068Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000592genomeSc0000592:82437..89068 +
Properties
Property NameValue
GeneIDBlg02031