Blg02027.1 (mRNA) - B. lanceolatum

Overview
NameBlg02027.1
Unique NameBlg02027.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0003551:406..1796+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02027.1 ID=Blg02027.1|Name=Blg02027.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1391bp|location=Sequence derived from alignment at xfSc0003551:406..1796+ (Branchiostoma lanceolatum)
GTTAGCTGTAGTTGATGGTGGATGGTCAAACTGGGGCCCATGGTCCGACT
GCAGCGTGACGTGTGGAGTTGGTACGAGGACTCGAAACCGAGTCTGCAAC
AGCCCTGCACCAGCTAACGGTGGGGCGGACTGTGCTGGGCAAGCTCGGGA
GACACAACAGTGCAACACGGGAGTGACCTGTTCAGGTAGTTCTATTCTGT
AAACATAAGAGCATACAAAATGCTTTCGTCCATTTCGACTAAAATAAACG
CTCTGTTACTGGCTTAACGGTATCTAGATGGTCTAATTAAACGTTCGTCG
AAAAGACAATATAAACCGTCCCTTTTTCAATGCCCTTTTCGCGCACCGGC
CCGAACGTTACCGGCGTGAAGCACATCCCTATAACAATGTGAATGAGGAG
GAACACACCCGTCTGATTGTCTGTAACTTAATATTGTTACGCTTTGTGTT
AGGTGGAGTTGATGGCAACTGGTCAAACTGGAGCCCATGGCCTGGCTGCA
GCGTGACGTGTGGAGTCGGTACGGGGAGTCGGACCCGAACCTGCACCGAT
CCAGCACCCTCTAACGGTGGGGAGGACTGTGTTGGACCAGCTCAGGAGAC
ACTTCAATGCAATACAGGGGTATCATGTCAAGGTAACATTGCTGTACTTG
TATTTCTTAATTCATTCATCAAACGCCTATCATGGTGTTTTGTAAGGTAC
CCATTCTACCTAAAATGATGGAAAGATAAAAGTGATTTTTTTTCAGTTTT
CTTTTGTTGTAGTATACAACGATACAAGGCATAATCATTCAAGGTTGCCC
TTCTGAAAAGGTTTGCCCTTTTAGCTCGCAGCGTACCTTCCTTTTTTCAA
ATAGGTGATGGCGGTTGGTCAAACTGGGGCCCATGGTCCGACTGCGATTG
TGGACTTGGTACTAGGACTCGGAACCGAACCTGTCTTGCACGAACACGGC
AGAAAAGACAACAGGACACACAAAACGGGGCGAACTGTGTTGGACCAGCC
CAGGAGACTCAACGGTGCATCGCGGGGTCAATATCTTGCCCATGTAACTC
AATTCCTTAGAATCTAACGTTATAAGCGATTCTATAGGTGCCGAATGGCT
CATTTAGATTGAACGGAGCGGGGTCGTTTAGGCACGTAGTACACCCCAAA
CGGCATCCATTGAGTTTTGGGCTACGCCTCGGGTGCAAACTTGGTGGGAT
ATCAACATCCAATTTAGCTTAAACGAACGTTCTGTGGATCATGACATCCA
TGGAATGGCACTTTGGTAATTCTGCAAAAAAAGCAATTCATAATGCAATC
AAAGAGGAAGCCTTCCAGACCCAAGCTAAATGGTACGCATTCACACACAT
TTGGACGTGGTGGAACGTCCTCATACGCCCGTTGGAACGCG

Coding sequence (CDS) from alignment at xfSc0003551:406..1796+

>Blg02027.1 ID=Blg02027.1|Name=Blg02027.1|organism=Branchiostoma lanceolatum|type=CDS|length=450bp|location=Sequence derived from alignment at xfSc0003551:406..1796+ (Branchiostoma lanceolatum)
TTAGCTGTAGTTGATGGTGGATGGTCAAACTGGGGCCCATGGTCCGACTG
CAGCGTGACGTGTGGAGTTGGTACGAGGACTCGAAACCGAGTCTGCAACA
GCCCTGCACCAGCTAACGGTGGGGCGGACTGTGCTGGGCAAGCTCGGGAG
ACACAACAGTGCAACACGGGAGTGACCTGTTCAGGTGGAGTTGATGGCAA
CTGGTCAAACTGGAGCCCATGGCCTGGCTGCAGCGTGACGTGTGGAGTCG
GTACGGGGAGTCGGACCCGAACCTGCACCGATCCAGCACCCTCTAACGGT
GGGGAGGACTGTGTTGGACCAGCTCAGGAGACACTTCAATGCAATACAGG
GGTATCATGTCAAGGTAACATTGCTGTACTTGTATTTCTTAATTCATTCA
TCAAACGCCTATCATGGTGTTTTGTAAGGTACCCATTCTACCTAAAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02027.1-exon-xfSc0003551-1570713199:406..590Blg02027.1-exon-xfSc0003551-1570713199:406..590Branchiostoma lanceolatumexon
Blg02027.1-exon-xfSc0003551-1570713199:858..1796Blg02027.1-exon-xfSc0003551-1570713199:858..1796Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02027.1Blg02027.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0003551genomexfSc0003551:406..1796 +
Properties
Property NameValue
GeneIDBlg02027