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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000136:524402..533022+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02007.6 ID=Blg02007.6|Name=Blg02007.6|organism=Branchiostoma lanceolatum|type=mRNA|length=8621bp|location=Sequence derived from alignment at Sc0000136:524402..533022+ (Branchiostoma lanceolatum)
CGCGAAGCGATCTCTCACGCAATGCCTAAAGGCTAGCTACAATGCAACAA
GTTATCTAATTGTCATGTGCAAATCTGCCATTTCTTCTTTATGTCTTTAA
TGATGAAACACGAATCCATGCGGTACATTGAAGACTCCAACTGGCCAAAG
GGTGGCTGTAGGTTCACGGGGCCGGTGGTCAGTTGTGACGTCCTATCCGT
AGGGACAATAACCGAGGTATTCATCGCACAGGTAAACAACAAGCTTGAAC
TCGACCACGCTTTAGGGCTACGTTGATTAATCATAGCCATTTAAATGGTT
ATGATTAATCAACGTAGCCCTAAAGCGTGGTCGAGTTCAGTAAGACACAA
ATGTATTGGACACCCTGTATTAACTATACTGAAGGTGTTTTTTTTGCTTG
TGGCTTTATCTTGAAAGCAACGTATATGCCATGTTCAGCGGAATTTATGG
AATTCCGGAAAATGTCAAAGCGGTCACTGTGACTTTTACCCCTAGTTCGT
TTGAGGTCGTAGGCAAACCTGTTTGGCAAGAATGGCGTCTATTGTAATTA
AGGGGATTAAAGGGGTTATTATCTCCATGAAAAATGGAGATATTGTTTTT
GGTGTGTCTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTAGTCAGTATAA
CTCAAGAACCTCTGGATGGATTACGATGATATTTGGTATGTGGGCAGGTG
TTGTGAAGCCGAAATTCAAGGTCGATCTTGGCCCCCCTGGTATGTGACCT
TGGTACTGCAGCAGAACTTCCGTTTTTGTATCTTTTGACCTGGACGGGCT
GTGGTCTTGATTTTTGGGTGGCAGATAGCTTGTCATTAAGAAATGGTGTA
GGTTTGGTCACCCTAGCAGCTTGCCCTGGAACTGCAGTGGCGTTATTGTG
AAAATCTTCTAAGGAGAATAACTGAGCAAAGGGACGACGGATTTCCATGA
TATTTAGTATGCAGGTAGCTTAGACAGAGGTGTACACAATGATGTGCAAA
TTATGCTAATCGACACTTCATTTCCATAACTAATAAGGAAAATCTGTATT
TGCAGTGTTTTCCATTATAAGACTCAAATACATGCATGTAACATATGTAG
TTTATGGCAAGTGGAGCATCAGCAGATACCAATTATGCAAATAAATTCCT
AATTTGCATAATTATGCAAAAGTGCCAGAATTCATCCAAGTGGAAAATTA
TAGGACTGACAATTTTGCATCATGTCTAAGTTAGATAAAGGTGTTTATGA
CCAAGCATATATTATGTAAAGGTGTAAGTCATTTGCATAAACAGAATAGT
TCATGGAGATATGAGGTCGAGGAACTCTTGTTTACGATTGACTTTATTAC
CTTCGTCGAGAAGGTTATGCAGAGGCAAGGAGGTTGGCAGAGGGTATCGT
TTGTAAAAAAGCAGAATAACTGGAGAAGGCATGGATGGATTGTCTTGATA
TTTGGTAGGTAGGTGGGTAGATCTTGATGAGACCTAGAAATGATTAGATT
TTGGGTACCATAGCGGCTTATCACGGTACTGCAGCGGAACTTCCTGGTTT
GGCCCCTGGCGGCTTTGTTGGAACTGCAGGAGCAGGTTTTGCTTCAGACT
TACTCAAGAAGGGCATGATGAATGGTCATGATTTCTGGTAATTAGATAGC
TTAAGTAATAATGTACATGAATAGATACTTATTATGCAAATTAGTATCTA
ATTTGAATAATACATGCGGAAAGTTTGTACATCCATGATTCTCAAACATG
TGACACATGTGACACATGTAATGCTAGGGTCACATTTCTAATCCGGGGCC
CGGCCGGGCAGTCTTTGGGAACAAAAGGTATGACATGAAAAACAACAAAA
ACACAAAACGCACCCAAAATTATTGAAGAGCATAGCTTGTGCAAATCTAG
TGACATACACTTTGATTTTTCGTTTCCGCAAACAGCCCGACCGGGCCCCG
GTTAGGAAATGTGACCCTAGCATAACTGGGGAAGAGAGAAATATTATTAG
ATATCAACTATGCAAATGAAGACCTCATTTGCATAATTAAGGAGGAAATA
CTATAACTCAAGATGGGCTTGATGGATGGTCATGATTTTTGTATGTACAT
GTAGATAGCTAACGTGATGCTTCGTATCATTAGAGGATAATTATGAAAAT
CAGATTCTAATAGAAGAAGAGAGGAACGTTGACAGATAGAAAATATGTAA
CTGTAGGCCTAATTTGCATAATTAATGAGAAACTACTTCAATTTCATACT
TGTGGCATTTGGAAGTTATGTGAATGTGAATATCGTTGAATCAAATTATG
CTTATAAGGACCACATTTGCATAATTGATGAAAAATGTTAGCATAACCTG
CTTTTTTGAGCTCATACTTTGGACAACTGTTATTTGGGTAAAGACGATCA
ACTGGTATGATTTATCATTGATGAGAAATACTCCCAATATGTCAGTCATA
AAGGTTTAAAATCATTTGGCGAAGGTATGAGGTCGTGGAACTCTAGTTTT
TCATACTCTTGCTTTTATTGTCTTTGTCAAAGTTTACCAAAGGACTCACA
AATTTCAAACGTAGACTAGAGCACTTGTGTATCCTATGTCCAAGTAATGC
AGTCTTATCTAGACTTTGTAATCGTCATTCCTGCATGTGCAGTTGAATTG
TACTACACGTATACTAGCAAGCGTTACTGTCTTACTAGGTAGCCCCTTTG
TTGAAGACAACAAGTTGATAGTCCCAGATTTTAATTGTGTTGCTCTGCGA
CTATTTTGATACTGTTAACCACGTCAACATTATTAAACGTTTTTTGTTAT
AGTAGTCTTATTTTGTTGGCTTTACCGTATAACGTTAGGCTGATTGTAAA
TTTCTGCGCAATTCAGCTTTTACTGCAAGGCCGATTTGTTCCATGTTTTA
TTAATGAACGAATTACTACTTCTTCTTTTTCTCAGAAGACTGAGGCAGAG
AAAGTGATAGTGTACTCAGAAGATGGGACTTTCCTTCGCAGTTGGAATAC
CGACAGGCTTGGCGCTCCACACGGGCTAAGGGTGCACGTACCTTCCGGGG
GAGGGGTGGAGTCAGCGGAAGTGTGGGTGACCGACATCGGACAAGGTATT
GATTTCATTTGATTTGATTTGATTAGAATTGCAACGGTACAATACATGTG
ACACACAGGCAGCTATTGCTGGTGTCGTGACCCACAGGTGTTCGACTCCT
GCATTCCATCATTACTATTTTGTAAACACGACCCAGCAGCGCATTCTTTA
ACATACAAAAACAGACAAAATTATGAGAGATCATCAACAGATGGTTCTCG
AATATGATATCAAGGGAATTTCAAAATAACAAATAATACAACATAAGGAA
TAATCTATGAAATAATTTTTGCAAGGCCGTCCTTGTATGTAAATCAAATA
GTGAACATGAGTCAATTACCACATATGATCAAAACAATAAGACCAAAAAA
ATAACAAGGTAAGCCCTGCAAATAAATATAAATCAGAACACGAGAATAGA
CCAACATGGTGATAATGATAATGAACTCAGGGAAATTGAGAAAAACAAAC
ATTTCCCATCCATTCATTCGATCACTCACTACACTCCCTGAAAAAATCAG
TACAAAAAAAAAACATTATGTACTGGGGGTAGTGACCACTTTATTCAAGA
CATCAATTTGTTTTTGCTACATCTTAGCTCTACCCAAAACTCAAAGGTTT
TCCTTTGCTGTCTCGCCACAATCCGTTAAAGGTACTTCAGCCCTTTTCTC
GTACGCTTTTTTGACGTTATCCCTCCATTTTCGTTTCTCCTGCAAGTCCG
TGAAATGATAAGCTTCACTCTTGAGTTTCACACGCGCAACCTTCATGATA
CTGATCTTGTCCTGATAGCTATTGAGTTTGAACAGGATGTGCTGGGGTGT
TCCGTCGCCGTCACTCTTGCTCTTCGGCCCGTCAGGATGCGCGCGTTCAA
TCTTAACTCGATCAAGACCAAACTTCTCGTGTAAGATCGTTCCCACCGAA
GCCAAACAGTTTTCCCCCTTCGATACCTTTCGTCCGATGATTCTTATGTT
GTTTCGTCTTGAAAACCGCTCCAACTTGTTACTCTTGAGTTGCAGTTCTT
CCACGAGCCCTTCGGTCGCCTTCAGTTTCTGTGTAATGCGTTTAATCCGC
TCGTCTGCGTCACGCTGGAAGTCGGCAAGTTTCGTTTCCAACACCTCATT
TTTCTTTTCTAGCTTCTCGAGACGACTTTCTAACAAAAGAACATTTTTCT
CGAGGTTTCCTTCAAGGGATTTTACCTCAGAATGAAGCTCTCTCTGCCCA
TCCAGGATCTTCTTGAACTGGTCCCGCACAAATGACTCGAAGTCCGACGC
AGTGTGTCCCTTGCCGTCGCCATTTTCTTCTTCTCTGGTGTCGCCGGGCG
AGTCGTGTCTCTTTGCTGACGCCCCAGGCGTCTTTCTGGCGCTCATTTGG
TCCAGTTTTGGCGTGTCCACCTCCAGAAGTTATCCACAAAGCTAGCTCAA
ACGCAAAAGTTGTACTCAGGCGCAAATTCGTCGAGAAAATCGAAATTTTA
GCAGGAGCTCGCCCACACACGACTCACGTGCCGCCATTTTGTTCAATTTT
GTTATATTTTGTTTTTTAATACTAAGCTTAGCATTTTGTTTTATATCATC
GGAAAGCTTAATGAATATTTTCCTATTTCGCAGGGACATTTCAGCTCTCA
GGTATATACAACTTCTTACAATCTCTTAGGTCCCTTCGGTTGCTCCTTAA
AGATGTTTGATCGTCATGGCAACCTTAAGGTGACACTTGGCACGCCGGGT
GAGAGAGGATCTAACCTTGACCCGTTACAGTTTGACCAAGTTTCGGACGT
GGCGTTCAGCTCTACGGGAGACATGTTCGTAGTCGATGGCGACGATGGCA
TCAACCATAGGCTCTTGAAGCTGTCAGCAGGTAAATAACGCAGACCGAAA
AAGTAGATTTATGGAACGAATATGATAGACGTCTGACATGTTTTTACTGA
TGTAGAAAAAAACAACTATATCCTTTTTATACTTTTATTTAATTTTTTCA
TTATTTGCACATTCATGCTCGTACGCTAATTGCAAGGGTACAAACAGTAA
AAAATGTAACAATTGTCTATGCTATACATCTAACTAATATTTCTACATAC
ATTACTGGGGGGTTGACTTCTTTGGAGGAAGTGGCTCAAAAAGTGATTTT
ATCATTAATATTAAGAGGCATTCCTACACTTCAATTGCAGAGCCACCGTG
AGAATGCAAACTTAGATATGTACACAAGGTAACTAGTTACTTAAGCAACT
GGGACAATGTGAGAATGTATTTCTAAATCAATCTAGAATGAGTAACTATA
ACATTATGAATCTTATTACTTCGATGTCTAACTTTCACCGACATGTCAAA
CATGAAGAGTTCCATACCCACCATGCAAAAGTGTCACCCTGGCAAAGTGT
CCCCTCATGCGAAATTGTCCGTACCCTCCATACAAAAAGGGCGATATACT
GTATGTACCCGTGCAAAAGTGTCCCGCTGGGGTCGTGTGGCGTAATAGCA
GAGCGTTCGGTTCAGAACCAAGAGGTTCCGAGTTCGAATCCTGCCCTGTC
ACCGATCTTGTGCCCTTGGGACTTTCCTCACTCCACCCAGGTGTAAATGG
GTACCTGACTTCGGTTGGGGAAGGTCGTATTAAGGTCACCTGGTGGCGCC
GAATGGCAGCCGCCCAGACCCTTGCGACAGTTCCACGTATTGCAAGTGTG
GACAAAATATGTATATGCATGTTGTGTATCATATAAAACCTGTAAACCCT
GCATCAATTCAGCACTAGAAAGGCTGCCATTGCGGGTAATTTCTGACCAA
TAAAAATTGTTATTATATATATATATAAAAATGGCCCAATACAAAAATGT
CCGTCAGAAAAGCTGATATTTTTTTTCTCCATCTACCTTCAGACCACCAG
TTGCTCTGGAGTGTCGGTGAGGAGGGGGCCGGGCCCGGCCAGTTCCGGGT
ACCGCACAGTGTAGACGTGGACAGGTTCGGGCAGGTGTGGGTGGCAGACA
GAAGGAACCGGCGGCTCCAGGTCTTCAGCGGACAGACGGGCAGCTACATC
GGCGAGTGGACCCTCAACGAGGATGTCTATGCAGTCAGGTAATTGTTACA
ACAAACATTCAACTCTCTTCCGATAGAATTTAGAAAAAAATTCAAATGAC
CGAATCTTTGTACCAGTTTTCTGGATGCTCAGCCCACGTCAGTTTCCGGA
AGTGTGACGTGACCACCGGGTCAAAGGTGATTGGAAGTTTGTATCGGCCC
CGTCTCTTATGAAATAAGTGTTTGTTTATGTCTAATACTTTCCAAAAGTC
TGACGTGAGCACCGGCGCAGGTCAAACGAAATTGGAAGTCTGTATCGGCC
CCCGTCTCATAAAGATGTCCGACAATGCGTAACACAAAAAACATACGGTT
GTACACGACCCCGTCGCCATTTCGCAGGACCGCTAGCCACTACATCTCTC
TAGAGAATGTTGCAAGTCCTCAAGCAAAAAATGTTGTCTCCAAGCTATAG
GATGAAAGTGCCAGATTCTTGGTAAGGTCAAAACTGATTCAAACATTGAA
AGACGCTTAGGGGGTAATATTTTTCTTGGTTGTAGGTTATTCGTTAAGCT
AAAGCCTGGAACGTTTGAAAAAATCTGAATTTGTCATTTAATAACAATTT
TTCCATCTAAACTTTCAGATTCAGCACAGACAAGTCCATTGTCTTTGTTC
TCGAAGAATTGGTTGGTGACCTTTTGATGTTGAAATCTCCGAACAAGCCC
GGTTTCCTTGGCAACTACAAGTTGATTGACATTTTGCACATGCCGATCCC
TGTCATTCCGCACATGTTCTGTGTTAACCAGGTAACAGAGGCTGTCTTCA
TTGCTCAACTTGGAGCTAAACGGTGTCAGAAATTCGTCCGAGGAAAAGGA
AAGGCAAAGTGCTGGCTTTCGCTTGTAATCGTATGTCGCGGGGGAAAACT
TTGTGTGCAGATTGTTGCAAGGAAAGCAAGTACAGAAATTTCTTCTATGG
GGTGAAATTGTCCACTATGTCATCGAGCAGTACGGTTGCCTGATGCAACG
TACGTAAGTCATGTCCTGGCACCAGTGGCAAACACACACATATTCACACA
TTCGTACATTATACATTAAGTTGCACGACTTGAATATGCTGAACATCTGA
GCGCGTACATTTACATGGGCCTGTTTCATTTGGTGTGACACTTACAAAAT
CTAAATGAAAAAAAAAATAATAAAACGTTACACAACAGTGTTATCAACAT
CATAGAAAGCATTAAATGTACAGGTGTTCCTGTTAGGCCAAAGCAAGTAT
TTTTTTATGGATGACANTAATAAAACATTACACAACAGTGTTATCAACAT
CATCGAAAGCATTAAATGTACAGGTGTTCCTGTTAGGCCAAAGCAAGTAT
TTTTTTATGGATAACATCAGCGCTCTCATAATATTCGCCTGATGTCGACA
AAAACACCTAGGCGTTACATCAACAACTGGACTGAAGTGGGGTACCCATA
TTAACAAAGTAACAACTAAGGCTAAGCAGACGTTGGGAGTGATCAAACGT
AATTTGTGGGCATGCCCAGCAAAGATAAAAGCACTTGCATACACGTCTCT
AGTAAAACCAAACCTTGAATATGCTGCAACAGTATGGGATCCATACACAA
AGAAAGACAAGGATAAACTGGAGAGGGTACAGAACCAAGCTGCCAGGTTC
TGCACGAACAACTATGACAGGGGTGCTAGTGTCACTAAAATGAAAACAGA
TCTACAGTGGAAGTCACCTGAAGACAGAAGAAAAATATCCAGGCTTTGCA
TGATGTACAAAATTACTAATAAACTTGTGGATGTACCGACTGATAATTAT
CTAATACCAGCCCAGAAAAGGACAAGAAATAGTCATGCCTTTAAGTACCA
GAGTTATCAACCAAGGATTGATGTGTTCAAAAATTCGTATTTCCCGAGAA
CCATAGTAGAATGGAACTCGTTGTCATCAGATGCTGTAGGAACACCTTCA
CTAAATAGCTTCAAAGAACGATTGCAGTCAGATGTGCAAAAGTTAGGTGT
GACAGGCCGTTCAGTGTAACATAACCAGCTGCTGCCGTGCCGCGTGCCTG
CGAAGCTGATGTGTTACGCCGAAGGGCGGTTATACCGGCTATACAGATAC
AGATACAGATACAGAAAAACACAATAAATTTCTTAGCCCTCCGACGGTGG
TCAACATGCCCAAAATTGGAAAATATGTCGTAAACGTTGACAGTCAAAGG
TGTTTCATTGCATATGAATACCCAGTGTAGTTCCTGCCCATGATGGTATG
ACAAGCTGTTTTCTGCATTTGTTCTAGCAATGACATCATATACTGTCCTT
GGTTCTAGTTAATTGAGCTGTGTACACAAGGTGTTTCATCGCATATGAAA
ACCCAGTGTACTTGCTTCAGATGATGGTACAACAATCTCTTTTCTGCATT
TGTTGTAGTTAGTCTATTGATATGTATAGACATCTACAAGGACATGTTTA
CTGTTGAATAAAGGAGTTTTATATTGTATATGAAACCTCATTGGTTGAAT
ACAGGAATAAAAGACCTGTTG Coding sequence (CDS) from alignment at Sc0000136:524402..533022+ >Blg02007.6 ID=Blg02007.6|Name=Blg02007.6|organism=Branchiostoma lanceolatum|type=CDS|length=1035bp|location=Sequence derived from alignment at Sc0000136:524402..533022+ (Branchiostoma lanceolatum)
ATGTCTTTAATGATGAAACACGAATCCATGCGGTACATTGAAGACTCCAA
CTGGCCAAAGGGTGGCTGTAGGTTCACGGGGCCGGTGGTCAGTTGTGACG
TCCTATCCGTAGGGACAATAACCGAGGTATTCATCGCACAGAAGACTGAG
GCAGAGAAAGTGATAGTGTACTCAGAAGATGGGACTTTCCTTCGCAGTTG
GAATACCGACAGGCTTGGCGCTCCACACGGGCTAAGGGTGCACGTACCTT
CCGGGGGAGGGGTGGAGTCAGCGGAAGTGTGGGTGACCGACATCGGACAA
GGTCCCTTCGGTTGCTCCTTAAAGATGTTTGATCGTCATGGCAACCTTAA
GGTGACACTTGGCACGCCGGGTGAGAGAGGATCTAACCTTGACCCGTTAC
AGTTTGACCAAGTTTCGGACGTGGCGTTCAGCTCTACGGGAGACATGTTC
GTAGTCGATGGCGACGATGGCATCAACCATAGGCTCTTGAAGCTGTCAGC
AGACCACCAGTTGCTCTGGAGTGTCGGTGAGGAGGGGGCCGGGCCCGGCC
AGTTCCGGGTACCGCACAGTGTAGACGTGGACAGGTTCGGGCAGGTGTGG
GTGGCAGACAGAAGGAACCGGCGGCTCCAGGTCTTCAGCGGACAGACGGG
CAGCTACATCGGCGAGTGGACCCTCAACGAGGATGTCTATGCAGTCAGAT
TCAGCACAGACAAGTCCATTGTCTTTGTTCTCGAAGAATTGGTTGGTGAC
CTTTTGATGTTGAAATCTCCGAACAAGCCCGGTTTCCTTGGCAACTACAA
GTTGATTGACATTTTGCACATGCCGATCCCTGTCATTCCGCACATGTTCT
GTGTTAACCAGGTAACAGAGGCTGTCTTCATTGCTCAACTTGGAGCTAAA
CGGTGTCAGAAATTCGTCCGAGGAAAAGGAAAGGCAAAGTGCTGGCTTTC
GCTTGTAATCGTATGTCGCGGGGGAAAACTTTGTGTGCAGATTGTTGCAA
GGAAAGCAAGTACAGAAATTTCTTCTATGGGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02007.6-exon-Sc0000136-1570713199:524402..524632 | Blg02007.6-exon-Sc0000136-1570713199:524402..524632 | Branchiostoma lanceolatum | exon |
| Blg02007.6-exon-Sc0000136-1570713199:527337..527496 | Blg02007.6-exon-Sc0000136-1570713199:527337..527496 | Branchiostoma lanceolatum | exon |
| Blg02007.6-exon-Sc0000136-1570713199:529131..529331 | Blg02007.6-exon-Sc0000136-1570713199:529131..529331 | Branchiostoma lanceolatum | exon |
| Blg02007.6-exon-Sc0000136-1570713199:530344..530539 | Blg02007.6-exon-Sc0000136-1570713199:530344..530539 | Branchiostoma lanceolatum | exon |
| Blg02007.6-exon-Sc0000136-1570713199:531120..531690 | Blg02007.6-exon-Sc0000136-1570713199:531120..531690 | Branchiostoma lanceolatum | exon |
| Blg02007.6-exon-Sc0000136-1570713199:531790..533022 | Blg02007.6-exon-Sc0000136-1570713199:531790..533022 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000136 | genome | Sc0000136:524402..533022 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02007 |
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