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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000136:538871..542960- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02006.0 ID=Blg02006.0|Name=Blg02006.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4090bp|location=Sequence derived from alignment at Sc0000136:538871..542960- (Branchiostoma lanceolatum)
ATGGCTTCCAGCCAAGAAAACGCATACAGGCTCGACTTTGTCGCCCTGAA
TGAGAGTGTCAGAAAAATCAGACTGCGGGAGCGTCTTCTCCAAGAACGGG
GTATCCACCTCCCTATGGTGAGTCATCTAGTGGTTGCAAAATGCAATTTT
ACACAAATGTCGTCCACGTCCGCGAATGTTCTGAACTTAAGTTGAAATAG
GATATGTACGTTTCAACGACTTCGATACAGGTGTTCTAAACCTTTTTATG
CTTAGAAGTTCACGACTGATGTTCTAGAATGCATTACATTGCTGTCGCTG
TTCCATTAGCTTGCGTAAAGCACGGATGCTTAGTACTGTAAATGCAGAAA
TGTTCGCGGGGATCTAATTTCGCGGCAGAAAGAAAACGGAGTGTTCGCGG
TGGTTCTGAGTTCGCGTTTGAAACAATAGCAGCGCTACAGTCACAATGGA
ACGGCTTTTCGCGGTGGTTTTAAGTTCGCGGCATAGCGTTCACCGCGAAA
ACCACGAACATAAAACCACTTTTTGCATTTAAGTATTTGTAAGTCTCTTT
CCCCCAGGATGTATTTATAACATGCTTATGTCTTTATTTTACCCCAGGTG
CCATCCAAGAGTCAGACTGTGGCCGCAGCACCCGTTCCCATGTCCATCTC
GGAGGGTGATGTGGTGACCCGTCAGGAACCACTGTCGCAACCGCAGGAGA
AGGTATGTCACCCTCGCTGATAGTTCTCTTTCTTCACTGGAACATTTTAT
ACTAAACGCATCCCATGCAGACAATTAGTTCGTATCTTGAATGGGAAAAA
ATCACGCATTAAAGTAACACCGCTCATATACTGTACAACTACAACCCTTT
ATCTGTCCTTGGTGCTGATTTGAGTTCTTATTGACTGTAGCACAAGATGA
AGAAAGGACTAGCTTACGCACATTGACATCAACCGTGTATGAAGAATAGG
GAAAGTCTACATGCTAAAGATACATTGATGTAGTTAATGTGCTTCTTCTG
TCATGGCAAACGTAGATGTAATGTAAATCCTGTACATATTTCTATTACTT
CCTGCATCGAAGTAAATGTAAACAAAATGAAATATAGTAAAGGACATATA
CTGTGTAGTAATGTTTCCACGGCGTTTTATTAGCTGCACGCCCTTTCTCA
TATTTTTCTTATCTTAACCTATTATTGTATATTACAGAACACTTCCTCGA
GTAATCCTACTCTGGTGGACAGGTCGGACGTCCGATGCTCTGTACCAAAC
AAGGTGAGTTCTGATCTAGAAAGAGAAAGAGACACCCTCAAAATGTGCCA
GTAAGAAGCTATAAGATTATCTGACTAATTTGTGTTATTGCGGACATTAC
TTGTCAGCTCTCGTCGGTCAAATCGTTCTCAAATGTTACGAAATAAAAAT
AACGGTAAAGATATATGAATCTGGTATGAGATTTATTGGTTACTTGACTG
AGGTCCATTTGAAAATCGTTTTACTAACAGCAAAAATGTCTGTTTGTTTG
TTTGTCTGTCTGTCTGTCTGTCTGTCTGTTTGTTTGTTTGTTAGTTGGTT
GGTTGAATTATCACTTACCACACACAGATTATATTTTGCTGTATGTCTGA
AGAGAATTCGTTTGCAGCAAAACTTATCATGTCTTTTCTTCTTGTTATGA
ACAGGGGGCATCTGCGCCGACTGTACATGGCGAAAAGAAGGAGGAGGAGA
TGAAAGAGAAGAAGGAGGAGATGGAAGAGAAAGAGATGAAGAAAAAGGAG
AAGGAAGAAAAGAAGGAAGAGATGGAAGAGGAGATGGAAGAAGAGGAGGA
GAAGGAGGAGCAGACGGAAGAGAAGGGGGAGGAGATGGAAGAGGAGGAGG
AGATTGAAGAGAAGGAGAAGGAGATTATAGAGGAGGAGGAGATTGAAGAG
AAGGGGGAGGAGATTGAAGAGAGGGAGGAGGAGATTGAAGAGAAGGAGGA
GGAGATTAAAGAGAAGGGGGAGGAGATTGAAGAGAAGAAGGAGATTGAAG
ACGAGCAGCAGAAGGAAGAGATGGAAGAGAAGAAGGAGGAGATGGAAGAG
AAGGGGATGAAGAAGAAGGAGGAGATTGAAGAGAGGGAGATGAAGAAGGA
GGAGAAGAGAGAAAAGAAGGAAGAGATGGAAGAGGAGAAGAAGAAGCAGG
AGCAGATGGAAGAGAAGGAGGAGATGGAGATGGAAGAGAGGGAGTTTGAG
CTGGAGAACTTCGTGGAGCTCCTCTGCAGGACGGACATTCAGGACGCCTG
CAGGGAGCTCCGAAAAGAGACGTTCTCACTTGACCGGGAGCTGGAGAATG
CGGTCCATCTACTATCTTCAACAGCGATACTAAAGGCCTGCGTCGAACTC
GGAGGAGAGCTGACTTCTCATGTGCAGCAGGAGGAGGACGAATACAGCAA
CATGGAGGAAGCGGAGATGGGTCCCCATCGGGAGGAGGTGGAACAGACCA
TGGCGGAGGAGACAGCAGAAATGGAGGCGGAGCCGGAGAGGGCTCGTGAT
CGGGAGTTCTCTAATCAAGAGAAGGAGGGACAGAGGAAACATAGGACGGG
GTGGAAAGCACGGGGGAAGAGGGTGGCTAGGAGGCTCAGAAGGGCATTCT
CCCTCTTCTCCTCGTGCTGTCGAACCAGCTGTGTAGATCCGTAGAGCCTA
GTGTAAAAGAAATTAATGTTAATGTAGAATTAGTTTGATGTGCTTGTGTT
CAATATTGTAATAAAAAGAATGAAATATAATTTTGGTCTTTGTCGTTTTT
TGTCCAACAGCGTTATCTACAGTAATAGTGAATAATCATGTTTTAAAGTC
TGAAAACACGCCTATAGAGCAAGCTCCTGGGGGCTAAATCTATGTCACAT
CTTTCCAAGACCAATGACTATCCGTCACCGAAAGATCTTACTGATCTGAC
TATAACAGAAGATACAACAAACCCTCTAGTACACATTCCCGCACAATATT
GAGAACAAAGTGCTGTCAAAAACCGTGATTTCTGTGTGAAAGGAGTTTGA
TGGGAGTGATGAAGTAAAAGGCTGAAGTTGGCATGGGAAATCGAGCAAGG
ATGTTGGAGTGAAATATCGTAGAGTGGTGGCTGGCCTCCGTCTCTTTCCC
CGTAGAAGCAGATGAACTGTTGATGAAAAAGGCAAAACGGGCGGTGTGCA
AATATATTGTAGTCAACTAATTGCGCACAAGGCAGGCCCGGCACCGTGTC
CCTGAGGGAGATCCGTCGCTACCAGAAGTCCACCGAGCTGCTCATCCGCA
AGCTGCCATTCCAGCGCCTGGTGCGCGAGATCGCCCAAGACTTCAAGACC
GACCTGCGCTTCCAGAGCTCGGCGGTCATGGCTCTGCAGGAAACCAGCGA
GGCCTACCTGGTCGGTCTCTTCGAGGACACCAACCTGTGCGCCATCCACG
CCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCTCGCCGTATC
CGAGGGGAGCGAGCCTAAGGAGGATCGCAACAAGATCAACGACAACCCCG
GCCCTTTTCAGGGCCACCCACATATCCCAGAAAGATCTATATCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCGTGGCCCTGAGAGAGATCCGTCGCTACCAGAAGTCCACCGAGCT
GCTCATCCGCAAGCTGCCATTCCAGCGCCTGGTGCGCGAGATCGCCCAAG
ACTTCAAGACCGACCTGCGCTTCCAGAGCTCGGCGGTCATGGCTCTGCAG
GAAGCCAGCGAGGCCTACCTGGTCGGTCTCTTCGAGGACACCAACCTGTG
CGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCG
CTCGCCGTATCCGAGGGGAGCGAGCCTAAGGAGGATCGCAACAAGATCAA
CGACAACCCCGGCCCTTTTCAGGGCCACCCAAATATCACAGAAAGATCTA
TATCGTTCACCTTTCTTTAAACAGACGTACGTTCTTTCGTCGTTGCGCCT
GAAATTCCATCACACACGACATGCACATCCCCCCCCCCTC Coding sequence (CDS) from alignment at Sc0000136:538871..542960- >Blg02006.0 ID=Blg02006.0|Name=Blg02006.0|organism=Branchiostoma lanceolatum|type=CDS|length=1794bp|location=Sequence derived from alignment at Sc0000136:538871..542960- (Branchiostoma lanceolatum)
ATGGCTTCCAGCCAAGAAAACGCATACAGGCTCGACTTTGTCGCCCTGAA
TGAGAGTGTCAGAAAAATCAGACTGCGGGAGCGTCTTCTCCAAGAACGGG
GTATCCACCTCCCTATGGTGCCATCCAAGAGTCAGACTGTGGCCGCAGCA
CCCGTTCCCATGTCCATCTCGGAGGGTGATGTGGTGACCCGTCAGGAACC
ACTGTCGCAACCGCAGGAGAAGAACACTTCCTCGAGTAATCCTACTCTGG
TGGACAGGTCGGACGTCCGATGCTCTGTACCAAACAAGGGGGCATCTGCG
CCGACTGTACATGGCGAAAAGAAGGAGGAGGAGATGAAAGAGAAGAAGGA
GGAGATGGAAGAGAAAGAGATGAAGAAAAAGGAGAAGGAAGAAAAGAAGG
AAGAGATGGAAGAGGAGATGGAAGAAGAGGAGGAGAAGGAGGAGCAGACG
GAAGAGAAGGGGGAGGAGATGGAAGAGGAGGAGGAGATTGAAGAGAAGGA
GAAGGAGATTATAGAGGAGGAGGAGATTGAAGAGAAGGGGGAGGAGATTG
AAGAGAGGGAGGAGGAGATTGAAGAGAAGGAGGAGGAGATTAAAGAGAAG
GGGGAGGAGATTGAAGAGAAGAAGGAGATTGAAGACGAGCAGCAGAAGGA
AGAGATGGAAGAGAAGAAGGAGGAGATGGAAGAGAAGGGGATGAAGAAGA
AGGAGGAGATTGAAGAGAGGGAGATGAAGAAGGAGGAGAAGAGAGAAAAG
AAGGAAGAGATGGAAGAGGAGAAGAAGAAGCAGGAGCAGATGGAAGAGAA
GGAGGAGATGGAGATGGAAGAGAGGGAGTTTGAGCTGGAGAACTTCGTGG
AGCTCCTCTGCAGGACGGACATTCAGGACGCCTGCAGGGAGCTCCGAAAA
GAGACGTTCTCACTTGACCGGGAGCTGGAGAATGCGGTCCATCTACTATC
TTCAACAGCGATACTAAAGGCCTGCGTCGAACTCGGAGGAGAGCTGACTT
CTCATGTGCAGCAGGAGGAGGACGAATACAGCAACATGGAGGAAGCGGAG
ATGGGTCCCCATCGGGAGGAGGTGGAACAGACCATGGCGGAGGAGACAGC
AGAAATGGAGGCGGAGCCGGAGAGGGCTCGTGATCGGGAGTTCTCTAATC
AAGAGAAGGAGGGACAGAGGAAACATAGGACGGGGTGGAAAGCACGGGGG
AAGAGGGTGGCTAGGAGGCTCAGAAGGGCATTCTCCCTCTTCTCCTCGTG
CTGTCGAACCAGCTGTGTAGATCCGCCCGGCACCGTGTCCCTGAGGGAGA
TCCGTCGCTACCAGAAGTCCACCGAGCTGCTCATCCGCAAGCTGCCATTC
CAGCGCCTGGTGCGCGAGATCGCCCAAGACTTCAAGACCGACCTGCGCTT
CCAGAGCTCGGCGGTCATGGCTCTGCAGGAAACCAGCGAGGCCTACCTGG
TCGGTCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTC
ACCATCATGCCCAAGGACATCCAGCTCGCTCGCCAGATCCGTCGCTACCA
GAAGTCCACCGAGCTGCTCATCCGCAAGCTGCCATTCCAGCGCCTGGTGC
GCGAGATCGCCCAAGACTTCAAGACCGACCTGCGCTTCCAGAGCTCGGCG
GTCATGGCTCTGCAGGAAGCCAGCGAGGCCTACCTGGTCGGTCTCTTCGA
GGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCA
AGGACATCCAGCTCGCTCGCCGTATCCGAGGGGAGCGAGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02006.0-exon-Sc0000136-1570713199:542844..542960 | Blg02006.0-exon-Sc0000136-1570713199:542844..542960 | Branchiostoma lanceolatum | exon |
| Blg02006.0-exon-Sc0000136-1570713199:542259..542363 | Blg02006.0-exon-Sc0000136-1570713199:542259..542363 | Branchiostoma lanceolatum | exon |
| Blg02006.0-exon-Sc0000136-1570713199:541708..541773 | Blg02006.0-exon-Sc0000136-1570713199:541708..541773 | Branchiostoma lanceolatum | exon |
| Blg02006.0-exon-Sc0000136-1570713199:540321..541306 | Blg02006.0-exon-Sc0000136-1570713199:540321..541306 | Branchiostoma lanceolatum | exon |
| Blg02006.0-exon-Sc0000136-1570713199:539516..539775 | Blg02006.0-exon-Sc0000136-1570713199:539516..539775 | Branchiostoma lanceolatum | exon |
| Blg02006.0-exon-Sc0000136-1570713199:538871..539291 | Blg02006.0-exon-Sc0000136-1570713199:538871..539291 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000136 | genome | Sc0000136:538871..542960 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02006 |
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