Blg01947.3 (mRNA) - B. lanceolatum

Overview
NameBlg01947.3
Unique NameBlg01947.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000487:9000..24734+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01947.3 ID=Blg01947.3|Name=Blg01947.3|organism=Branchiostoma lanceolatum|type=mRNA|length=15735bp|location=Sequence derived from alignment at Sc0000487:9000..24734+ (Branchiostoma lanceolatum)
TCTACATACTGTACTTGTTTTTACCGACCATATGGTAGCATCACATTATG
TAACTGGCTTTGTTAGGGCCAACATGGGCTAGATTATTTCTAAACTTCGC
CAAGTGTAGATAGAGGGTATCTCTGGAATTTTTCTCTCACGAGCACCAGG
AGATGGGAGACGATGCTTGTGGTTCAAACTTTTTTCTTCCTCTTTGTCTT
GCGGTTCTCTGACGGGAGGTCCTTGGACGACTCCTTGGGGATCTCGCCCT
GGCTCCTCGCAGCTTCTGAGACTCTGTCTGAGACGGACACAGGGAGCGGT
GAAGAAGGTATGGATTTGTAACTTCTTCAGTAAGATTCACCTTTATTCTT
TTTCCCATAAGACAGACTAAAAAATGTTTCCTTTCTTAATCTTATTTCAA
CATACGACAAGTTTGGATCACACACATAACATAACATAACATAACACTCA
AGCATAGTAATAGAACACACTCGTTAACTACTAACTTGTAGTGTTTTGAC
AAATAAAAGATAGAAAACATTATGATTTTTAACCTAGATTTTAGAGGACA
TTAAAGTAAGTTTCTGCCTTTTATCTATATGCGTTATAGTGAAGCCCTTG
TCGTTGACATTTTACAATGGGGATGCTAATGTTAGTAGCTAGAATGAATC
ACCACTGTGTCTTGCACCTTTCGATGTTGATTAATAAATAAGAAAATGAT
ACTACACCCCCTAGAGAATACAGTTAACCTAATAAAATGTGCTATGTATG
AAAAAAACAAAATCAGCATTTCGATATCTCAAGCCACTGCTGCCTGACCC
CGTTAGTAAGCGAACATCTTGTTGTCTATTTTTGTCTCCCTGTTTGTTCG
TCCTTGTCGGCCGGACTTCCACCGTCGGACCCATGTCAACACTTTACAAC
AGTAAAACAATTAAATCAACAAGTCTGGACATTTATACGTTTTGTAATTT
TAGATTTGCGGTGTAACTTCCAACGGTCTCGTAACATGTCACTACTCGCC
TATAAACGTCAAAATAACCTTAGTTAAATTAATCAACAAGCTTAATTAAT
TCAACACATTTCCACACATTTCCACAATGATTTACTTGAGCATGTGTTGA
TGACTCATGTTTGAACGTTAACTTTGTGAATGGCACACCCGAATGGAGGG
AGGAATGATCATGATAATTGTGGCGTGTTTCTGACTTTTTGTGTCTGAAA
TTCCATGTAAGCTAATGATACATGTACATGTATATGAATTAACGTTAACG
TTACATGGTGTGACTGTTTCTTTCCTCCTACACAACATTTTACGTTAACA
GCAAATAACAGCGAGTACAGGCATCATGCTTTATTCTATAGAACATCAAT
CGAGAGGAATTTTAAGATTTGAACAAAGCTCAACGTTGCTAAGATTTGGT
TCTTTTGTAAGTTTATACAAGCTAAGGGCGCTAAGATTTGAAGATATGGA
GACAAGACGGCTTCCGTCGGTTGTATACTTACCCCAGTGTCGACCACGGA
ATGCAAATACTCAGTATCTTCTGAAGCTATTAGGAAATGTCAATAAGGGT
AGTGTAGGGGGGGGGGGTATATTTCTATTTCTTCCAGGATTTCACCTAAT
TTCATTATGTACAACTAAACCACTTTCGAATATTTTGGGATAACAAAACT
TTTGAATTTGTTCTGCAGATGTAGACGTAGGAAGCGGCAATGATATCAAT
TTGAACTTGAAGTCGACCGAACCACCCCCCCTCAAGGACGAGACCTTCGC
AGTCAACCCCGTTCTGCAGCATACCTGTCGGCGCGAAGAGGCTGATGGGT
ATCTGTGGCCGGAGACCGCTGCCCCGGGTTTGGCAGAGGTTAGTATTCAG
ATGTTTTTAACTCACTGTTTTGCCACCAAATGTGCTTGGGATTTAATTCT
ATCACTTTGTTGATTAAAAGGCATGGATACAGCCAAGTAGTATGTATCAA
TAGACTCGTAGCAAGTGGTCAAAAAGCCTGAACAATCCGCTAGGGGTCTC
AAACCTGCAACACTTCTTCCTGACACCAACAGCTATCTGGTACCCAAGAG
AGAGAAAGAGAGAGAAAAAATACTTCCATTTTCAATAGCGGTGATGCATG
ATAGAGTTAGCCGGGTTAAAAATGAGTACATAACTTATTGGACGGCTAAC
TTCTCCGGCAAATCGTTCAGACTACTTCAGTGGACGTGTTCTACTTCACA
GCAACCCAAGGATTCCGGCAAAGACTAATAATTAGGCTTAGCGTGTTTGG
GGGGCACTTCAACCTCAATAGTAAAACCTTTTTGACAGCAAAACGTATCA
TATATGAGCACAAAATATATCCATCAAGGAAAGACCTTACATGAGTACAT
ACGTGCGGATCCGTACGTTATCTTTAGACTCGGCTAGAGTCACTCGAGTG
TTCACTTCTCTGATTGAAATTTACACCCCGACCAATCAAACCACGTGGAT
CGCATTGAAACTCAGATTCGTATCAGCCATTTTCCGACAAATCGCTTTCT
AAGTTGCGTTAACGGCTACATCTGACAAAAAAATAAACTCGCCAGTGAGA
TGGTGGAGGTGTCAGCTTTCCAAAGATGTTTTCAGATTGACAATTTTGGC
ACTATGGAAGTGATTGAAAGCGACCGCGATTTAACGTTTAGAGAAAAGTA
GTAGAAACTATTTCAATCACTTCCAACGTGCCAAAATTGTCAATCTGAAA
ACATGTTTGGAAAGCTGACACCTTCCACCATCTCACTGGTGAGTTTGATT
TTTTGTCAGATGTAGTCGTTAACGCAACTTAGAAAGCGATTTGTCGGAAA
ATGGCTGATACGAATCTGAGTTTCAATGCGATTCACGTGGTTCGATTGGT
CGGGGTGATTTACTAACACAATATACACTAGAAAGGCAACATTTGCGAGC
AAATACAGCATGTTTAGCCATACTCCTCGCCATGCAAAAAATGGACTCTC
CCAAAATAACAATGGACCATTCTAAAATACTTGCACTAAAAAAATGAATC
ACCCCAGTCCAAAATTGAGTCTTCCAGTAGCACCTCAACACAATATGGAC
CAGTCCACAACCATATCCACTAATTGATTAACAAATACACTTCTGCTAAA
AAATGGACTTTTTCATAATCATTCCAGCTCAAAATTGAAAGAAATAATTA
AAGAATCCTCCCCTTGCAAGAATGGGATATTCCGTGCCATTTCCATGTAA
ACCAGTCGAAAAATATCCGCTGAAAATTACACTCTTGCGCATAATCAACC
CAGTTCAAAATTGAATTAAAAAAGATCAACCCCAGGGAAGAATGAAGTTT
TCCATAGTATACATATGAAGATTTGACAGGAGAAGAAGGAAATGACCAAA
AACAACATATTTCAGCGATAGTATGGGTGAAATATAAAAATGTGACACCC
CTTTGTTTGAATGTACTTTGGGTTGAAAATAACGAAACGAAAAAATTCTT
TGTTTAAAAAATCGTTTTGAAAGGCTGTATGCCAAACATTTGAATGAGGG
CCTGTGTACATGACCAAGGCAGACACATACCAGATTTCACATTATTTTGG
TTTAATACATAGGAACTGGAGATGTGTATCTTTGTTAAAAAAAGAGTGAA
CAAAGCCATGTAATCACATGTCCTAGGAATTCCCATACCATATTTGGCAT
GAATACTAGCACACCTGCGCCAGGAATGCAAGATAATTAGATTAACTCAA
TTGACCAATCAGGTGGTCGCAAGGCTCACAGGCATGCAAGGCCAGGTGCA
AGGCACTTGGGGTCAATGACCTTTAGGTCATATGTAGTATTGAAAGTGAC
AGAAGTGGCAAATATTGTCAAGAAAGCCCAAAATAAATCGTTTTGAATAT
ATGTATGCCAAAAATGGGAATGTAGTCCTTTAAATATTTGTTCAAGCCAC
ATATACAGCAAATTTCAGGTCATTCGGTTGAAATACCAGGGCGCAGGAGG
CCAAGATATGCTAAAAATAGCCTAAAAACCTCAATAAAATCACTTTCAAG
GTCAATATCAAAAAAAGGAAAAGAACGCACATTGGTTTTTGCCTACATTA
CCTCTGTACCAAATTTCAGGTCATTTGGTCAAAAAATGACAGAGATGAAT
CGATTTGAAGATTTGACAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAAC
ATGAGAGAAAACAATATGTTTAGCCATACTTATGGCTAAACATAAATATA
GGCTCGTGTTTGTTTACTGTCTCTGTTCCGCGGTTATGTCTGTTTATCAG
CTAGATTACATTCGATATCTGTTCCGTTTCAAGGTTCAGTGATCACATTA
CATATGATGGGGCAACAAAGCACTGAAGCTCCGGCAACATATCAGATTAC
CTACCTAAAATAACAACAACAAAGCATATCAGAGATAATCACATTATATA
ACATCAAGATCAACTGCAGCTACTGGCAATGCTTGAAAAACCTTACAGAT
CATTATGATATTGAAACATTATCTAGATCACCAAAATATCACTGAAATAT
CACTGAAAGATAATTAAAGATCAATGGGAATTCACTAAAGGATCAAATTT
AAGAAAACGATTAAGCTTCCTCCAGCTCAAAAAAACGTCCCGAAAATTCG
GCGAGTCTAATTTTCTTTTTGGAAGAAAGATGACCCGTTTCCTATAATTC
TATGCACCAGCACAGATAAGCTTTCTTGATTGTTGTATTGGTAATTTGGT
AGGTAAGTTGTATCGTCCTCATGACTACTCAGGTTCCGTGTATCGGGGAG
GAGGCGGATGCTGGCCGCGTGGCGACCCGTGAGTGCGGGATAGTGGAGAT
GCCTGAGTACGGGTACTCCGTGGCCTTCTGGCGGGGTCCGGACTGCAGCA
AGTGTCGCGTCTGCAAACCCGCCACAAAGTCCTGCAAGGGGGAGAGCAGC
TACGACATGGACTGGGAGGACACGCCGATAGGTGAGGCGCTGATTGGCTG
TGTGTTCATCATGGAATTCAAATCTACCAATCACAAGTCCTGAATGACTG
GATCATAACCACATCGGAGTTTAGGGGCAAGTTAAGATAAAAATGAAAAT
TCTTATTTTCATAAAAAAAAATCACAATCACACACAAGCCCTTGGACATA
ATCGTCATCAAGATTTAGTGGCAACTTTGGATAGGGGACTGGCAGACATT
TTCTCCAGCAGGCCAAGGTAGCTATGGACAATATGGAAGCCAGGGAGTTT
ACAGACCTCTTTGCTGACAACTCCACTTGTTAAAGCGCTATGATAATCTA
GGTCACGCCGGACCTTCATGTAACTGCCGTCGGCTGCCGAAGAAATCAGA
GAAGATTAGTAATTTTATGGCCAGCTTGGGTCAAGGAGGTCGTGCTTATT
GCTACTTCGACAGTTGCAAACTTTTCGCCTTGTGCAAGGGGGGTGGCAAT
CTTTCGTTGCTGCCAAAATAGGCTAGTGGATGTGATTGGGTTAAAGTTTG
CTTGTTTGTTTATTTACTTATTTGTTTGTTTACTAGGAGAGGTAGTAGAG
AAGCCGTGTGACGAGCGGCTGGGCCTGAGAGGGTCCAGTGTGAAGAGACG
ATGTGTGGAGTACCCGCCCCTCAGTATGGCCGTGTGGGAAGTTCCCGACA
TGACCGAGTGTGTCAGCGCCTTCGCCAACTCTACCATATTCCAGGTGATG
ATTGATCAGCAGTCCTGCTTGGTTGCATTGGCTGCTGAATTGGCTGAATT
TGTCTTAGATACGAATGTGACGTGCAACAACGTATAATTACGAAAGTCCT
AACATGGGATCGTGTTACTTAAGTTATCAAAGCTCTATTGTAATGGAGGA
AAGGACAAGAAAGAAACTCAATGTTTCCAATGTGTCAAACACACTTTTAG
CTTTATTTCAACACCGGTCTCGCTACTATCTTTATTGTCTGTGCTCTCAA
TCGCATAGCAGTTTAGGGATACGGCTTTAGAATGCTGCGAACTCACATGC
AGTACTTATTTCTGTTGCTAGACGACGCTGCTGGAGCAGTACTTCACCAT
GTACCTGAACTCCACCGTCCAGTGGATGAAGCGTAACGTCTGCCCGCCTG
AGACTACGTTCATAGAAGAGAACAGGAAAGGTCAGGATAGGACTTCATCG
TTTCGTAGTTATGAAGTAACCAACTGATACGTGTTGTACAAACAGAGAAA
GACGGTGTGTGTTTGTGTGTGTGTGTGTTTGTGTGTGTGCGTGCGTGCGC
GTGTGTTTTTTTTGTTTTTGTTTTGCGTGTGTCCTTTTTAGATTTCAGGT
TTCCAGCCTCAATGATGAATCATAACGGTATATGCAAGCACGAACGGTAT
CGAAGACAACTAAGAATCCCCGGTTTTTGCAGGTATTTTCAGATGGCCCT
TGACGCTAGCTGGGTTCCCGGCGCTCGCTGACTGTCCCTACGGCTCCATC
CTACCCTCCGCCCGCCTCATCCGAGACCTCATCCTCGACATCTCTCTCGG
AGTCTTCCAGCACCAGGAGATCCCCGTGGAGAAGTACAACGGCACCAGCC
TGACCGACAACTTCCTCAACACGCTCTGGACAAGCAGCATGGACAACTTC
GTGGAAAGCGACGTCTACAAGGAAGGGAAGGAGTTCTTCGAGAAAATCCT
TAACAAAACAGGCGAGGGGGCTAACGATCGCAAACGGCAGCGACGGTCCG
AGAAGACGACCGAACGTATCGTTGTCCGCAGACCGGAGATACGGCCCCGA
CACCTGGATCATTTCGGCACGTCCGACTATGGCGGAAATGCAGCAGTAGA
CAGTTTCAACCACAGCGAGGCAACCAACCAAACTCAAGAACCTCCATCCA
GAAACAAGGTTGGCAAACTGATCGTTCGTTCTCATTTTAATGTAACGTTA
CACATTTTGTAACTTGCGTTACCGTTTGAAGTAAGACGTTCCTGACCTTA
GGATACTCCACATATAAGGTGCCAAACTGTCATTTTTATGACGACTTTAA
ACCTTTCTGCCTTTTAAAAACCTTATATGTGGCATGTCTTAATGTCAGGA
ACGTCTTACTTCAAATGGTAACGGAAGTTACAAAATGTGTACATTTGAAT
AAGAACGAGCGTGATACGTACAGTTTATTGATGTGACTTGATGAATGTTT
TCGACGATGATGACGGTTGAAATTAACTTGTCCTGGTAACTTTTTGTAGC
GATATGGCTGAATTCCAAGATATCTCCATCAGCATTTAGCAACGCTAACT
CGGTGTACTGAAGCGCTGACTAGTAATCCATTGCGGTACTGCAGACATCG
AAGCGATTTTTGACAACTTCGCTTTCGCAAATATGCTGTGATAGTAACAG
TTGTACCTATGTCTCTCTTGCAAATACAAGACGAACTTTATTGCGCGACA
ATTGTATCTGGTACAATGTATGGCAACGTACGCACATAAAAGTCGAACTA
TTGCTAACGTTAATAGTTAGCAAATACAAAGGACTAGTTTAAGCTATGAC
TAACAGTAGAAATAATCTATAGAATAATGTACATGCTAATGCTCTAAAAC
AGTATGTTGGTTACAGTATATGCCGTATCAGGACTTTATAGTACTGTCTC
GTTTTTGCATAGAGTTGTATACAAATTTGCCTAGTACGTAGGTGGATATA
TGAACAGGGCATGATATTATCCTATTAGATATCTCTGTCCTGGTAGGTGG
TAATTTTGTATGACAACAAATGTCCTTCTGATGCCCAAGGTGACGTGGGA
GAACTTCGCTAACGTGCTGCTGCACCTGGAGCTGCTCCTGCGCAGAGCCA
GCCGGAAGTGTGTTCAGAACGAGGACGGCAGCGTCAGCTGGACGGAGCCC
ATGACGTGGATGTGCCGCTCTAAGGACAGCGCGCCGTTCGAGGACTTGTA
CAAGGTGGGCTCTTTTTGTATAATTGTTAGGCCACACCGACTTAATTGAA
TCGATGGCATCCGTGTGCGCATTGATTTTCACCTGTTCTCAAAAGAAAAT
TCGTGATGTCGTGTGGCGTAACGGCATCACGGTGTTCGACTCAGAACCAA
GAGGTCCCGAGTTGGAATCCCCTTGACGCCACCGATGTTGTGCCCTTGGG
AAAGGCACTTTACACGACTTTCCTCACTTCGCCGGCCAGGTGTATTAAAA
AATGGGTATGTTTTTATCTGTACGTGACACTGTAAAAAAACTTGAGTGCA
GTGCCTCGTAGTCCTTGTCTGTCAAAAAACCGAAGTAAAAAAAATTGTTT
TGTTGTTTGTGTGATATACTGTGTTCCGTGCTTTAATTCGCAACACCAGC
TTTATAGTCTTATGGTTTAGCAGCATTTTGTTTTTGCTAGTTTTTTTCCC
GCCCAATTGTATTAGTTTTGGGATCTCCAGACGATGTCATCCATAAAATT
AATTCAGTGTGGCCTTACAGGTTCTTTTACAATCGCACGCATCGACGGGC
GTTGCCATCTTGGGATTCTGACACCTTCCGGTCGCCATTTTGTTTCCGTC
CTAGATTTTTGCCAGACAGTTTCGAGGCTGTAGTGTCATCATGGGTTACT
AGTCGGCGCTTCAGCACCGCTGTGTTTCTAACACCGAAGTCACAATCTTG
GAATTATGCTAGATCTAAAATGTCTAAATCATCTTGAATTTTGATTTCTT
GTTGGACGTCTGATCATACTTCAACAGATTCTATCAGACAGCACGAGAGT
GGAGGCGTTCATCTCAAGCGTAGAGCACGTGACCGGTGACCTTGGCAACT
TCAAGACCCCGGATGTGGAACTGACCCTCAACATGTTTGAGACTGCGCAC
AAGGTGGACCAGGTGTACTCCCCGGAGGTAAGACTGGGGCTTATTTTCCT
CCAACCATTTTTTTCTCCCATCGCTCATCCTGCGGATCCCTTTCAGAATA
GAATTTTGAACATCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTNCTCTCTCTCTCTCTCAATTAGCATTGCC
GTATGTTTGAATAACCTTCGTATTTGTCTCAGATTGCCTCCACGCTTATC
GAGACGATCAGCAGCCTGGTGGGCTCCTCCCCTGGAACACTGAGTCTGGA
GGAAACGCATCGGTTAGTTAATTTTTGCACAGATGAATTTGATATCATAA
GGGGTTGGACACATGTTTACACCGGTTTCAGGTTAGATAATGCCAAATTA
TGAAATTATGTCTTATCTTAGCTTGACAATTCATCTGGTAGAGTTAATTC
TGAAGTATGTTTAAACTGTAATTTGTAGCACCTAAAGAAGACGTGACCCA
ACATTTCGACTGAACAACAGGACTCTTATAAACAGCAGCAAAAATTATTA
TTGACCTTTGACCGTATCATCCCGTCCATCCAGCTTACTCCTGTTAATCA
ACACGATCGTGGATGACGCCATGACGGATAACATGACGTCATACTCAGTG
GTGACGGACAACGTTGTCGTCAACATAGAGAAGGTAAAACAACATTATCA
GAAACACTAAAATAGCCACATTCGTCGTACGATCGCAAACCAATGGAATT
CTTCGGGCAGTCTTTTATATGTCATAAGTTTACAGTTAGATGTGTAGAGG
TTACGGTGGTTTTAACTGCTATACAAATACAGACGCAGACATTCTCTTAC
AAATGAAAATATAAAACCAAGAAGTTTTCCAGTCTTTGAGGTTTTCAGAC
GAAATGACAACATCACGATGCTTTCCCCGCAGGTGGAGTCACAGGCGTTT
CCCGGCATGACGTTCGTGTCTTTGCACGGTCCGTCCAACCTCACCGAATA
TACGGACCATGGAGGGTCAGGTATGGATAACGTTATACTAGCTAACGTAT
ATTGCATTACATCCGCTATCTAAGCATACCTTTAAGCAGGCGTATTTTTC
ATTTTATTTTTCACTCGAATGAAGAAACAGAGATTTTACGTATGCTTTAA
GGCGTACTTGAATAAAAGATCGAATTTTTATTCAGTGTTTGACTGATACT
AACCAAAAGCTTATTTAGATCCGGTCATGTAGCAGTGGAGGAAATAAGTC
AAAATCATCGATCCTCCTTGAATCATTCGATCATTTGAAGAAATCGTTTA
TCTAGTATCAAGATATACAAAGCTTCTTTAATGGCATGAACGTATTTACA
TCTGAAGGTAACCTCAGCCTGAGGAACCACACGTTCCAGACCATCCCGGG
TGACCTACAGGAGACAGTGCGGCAAATCGACATCTCCGTCCTAAGCGAGC
TCATCTACATCCCGCACGCTGTCTTTGATGACGCCGATGTCAGGTTATGA
ACGTTTTGTATTTGTATCTTATTCATAGTACAAGTCCCCTCAACGCGAAT
TTCTCCAAAGAAGATGCGATCAACTCAAAGATACTAGGACAGTAATATCT
GTCGAAGAAGACCATTGGGGGACCGATAAATCTGGTCTATGGTATGTGGA
CAGGTGGTCACTATAGTCAGGATACCTAATGCTTATATCAATCAAAAAGA
TTATGGAATAAAAAGATATTGGTCACATTAGCCAGCTTGTCCTTATGACA
TACACAGGTCTAATGTTGGTATTGTATACAATGTAGAAATACATAATATT
CTACTTTTCATCATAGTGATAAAATAACAATCCGTGTGTTCATATAATTG
CACTGGGATCTAGGCATGTCTATAAGTCTACTATCCAGATTTTCACAGCG
CAGGATTCTCAAGCTCTAAAGACAGTTGTTTTTTACGCTTACAATTCCAG
AGCTGCACAGGGTGCGAACTGCTCCTGGCACCAGCACTCCCACAACCTGC
ACGCTATCCAGTTCGTACTCTACGAGAACGACCGGCTTTTCCCTTCCGGC
ATCAGCGGACCAAGCGGCCCACGCAACGGCACAAATTCTACCGAGAACCA
CGAAGGCCAGCTACAGGAAGACCAACACCAGCTGAAGATCGGCAGCAGGG
TTCTAGCGAGTAAAATCCAGGGACGTTGTGTGAAGAACCTGACCGAACCT
GTGGTCATCATCCTGAAACACAAGATGGTGAGAGTGGTCGATTCAACCAA
AAATGTTTTGTCTGTATTGAAAGATAGAGCCAGGAAAAATGAATATCACG
TAAAAGATTTCATATACTACTGTGCAACAGATACTTCCAGCAATAGTTCC
AGGTATGGAAAAATACTCTTTTATTCCTAATTCTATTTTGCAGAAGGGGA
GAACCCCCAAGTGCGTGTTCTGGGACTTCGATACCGCGGGTAGGAAACCT
TTAAAATCTTAAAATTGTTTTTCCTTGGTTATCAACTTATATGATACATG
TATAAAATTATGTTATGACAACGGCGACAACAGTAACATTTTCAGTGACA
GTAACACTTTGCGCTGGTGGTACTGCTGTGGTACTACGGTAGTTTTCTTA
ATTAGATAACAATGAAGGCGCATTTTGTAATGACATTGTGATTGCAATAG
ACTTAAGCCCTTTTTCCAATGTGAAACTGAACTGGGGAGGTGACATGAAT
TGTGTTTACTTTGCTGAGAAAGGTGGCGCAGGCGCATGGTCAACTGAGGG
ATGCTGGGTACACCAAACCGTTGATGACGTCACGGAATGCCATTGTAACC
ACTTGACTAACTTTGCCCTGATAATGGTACGTCGTTTTTGCTTTGGCTAT
ATTGTTATCAATGTCATTTCAGACACTCGAGAACGTAAACTAGCTCCTAA
ATGACGATTACAGAGGGTCAGTGGAATAACCATATGCATAGATCAGAGTT
TTTATGCCTTTATCCCACCGTGAGGCGTAGCGAGCTATCTTAACTCATCA
CTGACCAACCTAACTCAACATTAAGCGTTGTGGGTAAATCATTCGTGAAG
CATAATTTGATTCTGCGTAGCACGTTATTTGTCATCCAGAATTCATCGTT
AAGCTTTATTGAAAAATTATTCATTTCGCTTTATTAGTCGAACACCAGAT
TACCCAAAAGTCACAACGGAACTTAAGGGAATAAGATGCTCTTAAAAGAT
GGGCCCACATCTAATGAGACTTTCCAACAAGCAACTAATCTATAAATACA
GATATATATGGCATCATCAAAGTAGATGTTTGGTTCTTTCCTGTCCACGC
CCAGGACATCGCTGACCAGTTCGGTGCCGGGCCGTTGCCGGCGGAACACC
GCACAGCGCTGAACTGGATCTCATGGCTGGGCTGCGGTCTGTCCATGGCC
GGTCTCATCGGCACACTGGTGTCTCTTCTGTTCGTCAGGTCGGTAGTTTA
AACAAAAACACGAATGCACACTCAAACAATTCTTCTATTTCAGTCACTGA
CGAAAGTCAGCGGATGATCTCGGAAACGTCTGACGTCTTTTTCAAATCTA
TCCGGTTGCTTGAGTAACAGTAACAGGGATTGTGTCTGAAATCAGAGAGC
TGCAGATGAACTGCACTGAACCAAATAAAAAGAATCAAATCAAAGCACTA
TCAAAAAATCTTGATTACAAAACTATAGCTATCAATGACTTTTCGCAGAC
ATTTCCTGCCGTTTTTAAGCAATCCAAGGCAATATAGCTGGTTGTTTAAC
GTTTCTTCTGAACTCTACCTTCCTTCAGGAGCCTTCGCCAGCTGAAGACG
ACGCCCTGTCACGTGAACCTAAGCGCGGCCATGCTGCTGGCCATGGTGAG
TCTGCAGGTCGGGGTGAAGCAGACGGACAGCCGGCTGGCGTGTGGGGTAC
AGGCCGCGCTCATCCAGTACTTCTTACTGGTAAAATACAGCACGTTGTTA
CTATTAAATACTACCTTCAGTGACTGATTGGTGATGAAACTCCATTCAAG
TTTCATCTGTTGTGCTATTTTGACGTGAATGATACTTTAAACTTGGGGTA
AAACTGCATAGTGGCGAAATTCGTTCGCTACATCTCCTCTAAGGCACCGG
TCACATCGTGTATATGTCGTGCATATACATTACAATATTTAGCTAACGTT
GCCTTGCTAAGGAAAAGGTTGCAGCACAGCCTCAGATCCTTGGCGGTGGT
TGGTTTTGGCACAGCCGTACCACGTACCAAGAACCACGGCTTACGACGAA
TGTGATCGCACCGTATCTCACCGCTCTTTATTTCGGTTGCCCTTTAATTT
CCCACCACCTATTACAGGTGTCGCTGGCGTGGATGGCAGTCGAGGCACTA
CTCATGTACCAGAACCTGGTCAAAGTTGTCCTGAGACCACCTCGGTTCTT
CTTCTGCAAGTCTTGCGTCACAGCCTGGGGTAAGAGATCTTCAATTCAAA
GGGCCTAATTTCCAAAGGATGGAGATCGTTCATTGAAAGATCTTAGCAAT
TGGATGGCCTTAGAGACCATTCAAGTATCATTGATATCATAGAGAGACCA
TTGAGAAGATATAAAAACAATGAATTCTTAGTGTTTCCCTCCCTTTGCAG
TTGTACCGGCTATCGTAGTTACCGCGTCTGTCTTTCTTCGCTGGGACTCA
TACGGCGCAGACGATAGGTGAGATGGATATCAAACGTTCAGAATCACCAT
GTAAGCTACCTAGCCTCGCAAAACGTGTAATGCCATGTGCAGAAAAGATA
GACAATCTTTGTATTATATAGACATATGATAACATATGAGAATTACGGTC
AAAGGTTCGTATATGAAAACATAACGTTAGTTGCTTAAACTATCCATTCA
CAGTGTACATGCATGCTTCAGAAACTGTTACTTTGCGTGTGTTGAATACT
ATGTAGCAAACTAGTAGAATGTATCAAGACGATGACAATTGTCAGATTTC
GGCTCAATGTGTTGTTGACTGATGTTTTGTTGTCGCACCGGCTGCTTTAT
CTTAGATTATCATGAAAAGGCTTAAACTTTACATAACCAACACTGAAATT
ATTTGAACCCAATGTCATGTCCTGGAAGTTGCAGTAGACTTGTTCATTCC
GTCAGTCAGTCGAAAATTTGGGTCCCAATTATTTCAGCGTTTGTTATGTA
AAATCGAGCCTGTTCATGATGTCATTTTACCAACACAGATGAACTTTCAT
GCTATGCTCCTTTAGATGTTGGATCTCCGACACCGCCGTGTTCTTCGCTA
CGTTCTTCGTGCCCTCCATGATCATCGTGGTGTTCAACAGCGTCATCTTC
GGCCTGGTGATCCGATCGCTGATGGTGCGGAAGGTTCCCGGGGACGGGTT
CGCCACCCGCCGAAGGGACCGCGTGAGGGAGGCGCGGAGCGCCATCGGGC
TCATGGTCCTGCTTGGTAAGTCTGATCCTGACTGTCCATCACAACTAGCA
GTTCAGCCAATGAGAGTATGGCAATTAGCAGTTCAACCACTAAGAGTGTG
GCTGTGCACATCACTTTTAGCATATTTGACAACTTTTCAAAGGCTTATTT
GATGTAGATAGGTAGGAACTGCAGACAGTTATGCCCATATGAACTAACGA
TTACCACAATTTGCGCTTCCATAGGTCTAACCTACCTCTTCGGAAGTTTC
ACCGTTGGCGACGCGCGATTGGTCTTCCAGTACATCTTTGCAATCACCAA
CTCCATCCAGGGCTTCCTCATCTTCCTGTTCTTCGCCATCGTCCCTCTCT
ACAGACAGAGGAGGTCGAATAAGAAGCGGTCTGACCTTCACAGCAAGATG
CCCTCTAGGAGTCAGTCAAAGATGTCAGTCGTGTCTCTAGACGTTTCCTC
ACGTCTTCGTAGGTCGTCTTCACAATCGACGGTTGAAAGCTTCACGGAAG
ACTGTGAAGCGGTGAGACGGAAGGTCGGCGCGCTTCCGGCTGTGAAGGAG
GTCGACGAAGAGCCACCGGAAACCGACGATGATGGCCGAACGAGTACGGA
TATTCCCGACGAGACCCGAACAACCGAGGAACGAGAAAGTCAAAGATTTT
CTGCATCCACCATGACAGAGACTCTGAAAAATGACGATCAAAGCAATCCC
AATTTTCCGCCGTCCTCGCATGGCTACTGTACCCGTGGCCGTGCGTTTGG
CCACGGGTTCCTTAGAAGGGCCCACGTGTCTACCTCTGAAAGCGAAGTGG
ACTTAACTCTATGGGACGACGAGCAGTGCTAAAACCATCTCCTTTACATA
ATCTCCAAGCAGATCTTACGGTGGCAAGATCGTGATTGGCCGCAAAGACT
TTGTTCATGAGCCGGCAGTTACGATCTTGCCACCTGAAAATCTTCTTGGA
AATTACCTAGCCTGGAGTCCAGTCTTCTTAGCTTTGGTCCGCCTCCAACG
TCGCTACCCCTGATAGGTTGGAAGCGGACCAAAGTTAACAAGGCTGGACT
CCAGGCTAGAGATTACCATTACAGTCAAGTCGCCTTAAACCAACAGGTTT
CTCTGGACAATCAAGGCCAGTTCTAGTTATCCTTGGTTAATGAAACGGGT
TACTAGAAAATCAAACCCATTGACTTGAAGTTAGACTGCCCGATGTTACC
TCATTGTGAACCTACAATCCTCACATCTTTCTGATGGAGTTAATAAGCCA
TGGCTTATTTGTGATTGATAAGTGAAGACAATCCCTGAAGAAGACGTAGA
TGATTGACATACGTATGGCAGACACTAAGCGCCTACACAATAGAAACTAT
TACCATAGTTGTGTAAGAAGGGGAATATTATGAAAGAAGTAAACTACAGT
TACACTTTTGAAATCATTCGAGATACTCAACCGATAAAAGCGACGAAAGT
ACACAAATATAACCGTATATCTATATTCACCTCAATCAATAAGTGGGTTC
ATGGTTCCAACTGCACATGCGCAGTGTGACGTATTGTGTGTAATATGTCA
AAGGCGAATCACCCTGAGACATAAACAAAACACGT

Coding sequence (CDS) from alignment at Sc0000487:9000..24734+

>Blg01947.3 ID=Blg01947.3|Name=Blg01947.3|organism=Branchiostoma lanceolatum|type=CDS|length=3675bp|location=Sequence derived from alignment at Sc0000487:9000..24734+ (Branchiostoma lanceolatum)
ATGCTTGTGGTTCAAACTTTTTTCTTCCTCTTTGTCTTGCGGTTCTCTGA
CGGGAGGTCCTTGGACGACTCCTTGGGGATCTCGCCCTGGCTCCTCGCAG
CTTCTGAGACTCTGTCTGAGACGGACACAGGGAGCGGTGAAGAAGATGTA
GACGTAGGAAGCGGCAATGATATCAATTTGAACTTGAAGTCGACCGAACC
ACCCCCCCTCAAGGACGAGACCTTCGCAGTCAACCCCGTTCTGCAGCATA
CCTGTCGGCGCGAAGAGGCTGATGGGTATCTGTGGCCGGAGACCGCTGCC
CCGGGTTTGGCAGAGGTTCCGTGTATCGGGGAGGAGGCGGATGCTGGCCG
CGTGGCGACCCGTGAGTGCGGGATAGTGGAGATGCCTGAGTACGGGTACT
CCGTGGCCTTCTGGCGGGGTCCGGACTGCAGCAAGTGTCGCGTCTGCAAA
CCCGCCACAAAGTCCTGCAAGGGGGAGAGCAGCTACGACATGGACTGGGA
GGACACGCCGATAGGAGAGGTAGTAGAGAAGCCGTGTGACGAGCGGCTGG
GCCTGAGAGGGTCCAGTGTGAAGAGACGATGTGTGGAGTACCCGCCCCTC
AGTATGGCCGTGTGGGAAGTTCCCGACATGACCGAGTGTGTCAGCGCCTT
CGCCAACTCTACCATATTCCAGACGACGCTGCTGGAGCAGTACTTCACCA
TGTACCTGAACTCCACCGTCCAGTGGATGAAGCGTAACGTCTGCCCGCCT
GAGACTACGTTCATAGAAGAGAACAGGAAAGGTATTTTCAGATGGCCCTT
GACGCTAGCTGGGTTCCCGGCGCTCGCTGACTGTCCCTACGGCTCCATCC
TACCCTCCGCCCGCCTCATCCGAGACCTCATCCTCGACATCTCTCTCGGA
GTCTTCCAGCACCAGGAGATCCCCGTGGAGAAGTACAACGGCACCAGCCT
GACCGACAACTTCCTCAACACGCTCTGGACAAGCAGCATGGACAACTTCG
TGGAAAGCGACGTCTACAAGGAAGGGAAGGAGTTCTTCGAGAAAATCCTT
AACAAAACAGGCGAGGGGGCTAACGATCGCAAACGGCAGCGACGGTCCGA
GAAGACGACCGAACGTATCGTTGTCCGCAGACCGGAGATACGGCCCCGAC
ACCTGGATCATTTCGGCACGTCCGACTATGGCGGAAATGCAGCAGTAGAC
AGTTTCAACCACAGCGAGGCAACCAACCAAACTCAAGAACCTCCATCCAG
AAACAAGGTGACGTGGGAGAACTTCGCTAACGTGCTGCTGCACCTGGAGC
TGCTCCTGCGCAGAGCCAGCCGGAAGTGTGTTCAGAACGAGGACGGCAGC
GTCAGCTGGACGGAGCCCATGACGTGGATGTGCCGCTCTAAGGACAGCGC
GCCGTTCGAGGACTTGTACAAGATTCTATCAGACAGCACGAGAGTGGAGG
CGTTCATCTCAAGCGTAGAGCACGTGACCGGTGACCTTGGCAACTTCAAG
ACCCCGGATGTGGAACTGACCCTCAACATGTTTGAGACTGCGCACAAGGT
GGACCAGGTGTACTCCCCGGAGATTGCCTCCACGCTTATCGAGACGATCA
GCAGCCTGGTGGGCTCCTCCCCTGGAACACTGAGTCTGGAGGAAACGCAT
CGCTTACTCCTGTTAATCAACACGATCGTGGATGACGCCATGACGGATAA
CATGACGTCATACTCAGTGGTGACGGACAACGTTGTCGTCAACATAGAGA
AGGTGGAGTCACAGGCGTTTCCCGGCATGACGTTCGTGTCTTTGCACGGT
CCGTCCAACCTCACCGAATATACGGACCATGGAGGGTCAGGTAACCTCAG
CCTGAGGAACCACACGTTCCAGACCATCCCGGGTGACCTACAGGAGACAG
TGCGGCAAATCGACATCTCCGTCCTAAGCGAGCTCATCTACATCCCGCAC
GCTGTCTTTGATGACGCCGATGTCAGAGCTGCACAGGGTGCGAACTGCTC
CTGGCACCAGCACTCCCACAACCTGCACGCTATCCAGTTCGTACTCTACG
AGAACGACCGGCTTTTCCCTTCCGGCATCAGCGGACCAAGCGGCCCACGC
AACGGCACAAATTCTACCGAGAACCACGAAGGCCAGCTACAGGAAGACCA
ACACCAGCTGAAGATCGGCAGCAGGGTTCTAGCGAGTAAAATCCAGGGAC
GTTGTGTGAAGAACCTGACCGAACCTGTGGTCATCATCCTGAAACACAAG
ATGAAGGGGAGAACCCCCAAGTGCGTGTTCTGGGACTTCGATACCGCGGG
TGGCGCAGGCGCATGGTCAACTGAGGGATGCTGGGTACACCAAACCGTTG
ATGACGTCACGGAATGCCATTGTAACCACTTGACTAACTTTGCCCTGATA
ATGGACATCGCTGACCAGTTCGGTGCCGGGCCGTTGCCGGCGGAACACCG
CACAGCGCTGAACTGGATCTCATGGCTGGGCTGCGGTCTGTCCATGGCCG
GTCTCATCGGCACACTGGTGTCTCTTCTGTTCGTCAGGAGCCTTCGCCAG
CTGAAGACGACGCCCTGTCACGTGAACCTAAGCGCGGCCATGCTGCTGGC
CATGGTGAGTCTGCAGGTCGGGGTGAAGCAGACGGACAGCCGGCTGGCGT
GTGGGGTACAGGCCGCGCTCATCCAGTACTTCTTACTGGTGTCGCTGGCG
TGGATGGCAGTCGAGGCACTACTCATGTACCAGAACCTGGTCAAAGTTGT
CCTGAGACCACCTCGGTTCTTCTTCTGCAAGTCTTGCGTCACAGCCTGGG
TTGTACCGGCTATCGTAGTTACCGCGTCTGTCTTTCTTCGCTGGGACTCA
TACGGCGCAGACGATAGATGTTGGATCTCCGACACCGCCGTGTTCTTCGC
TACGTTCTTCGTGCCCTCCATGATCATCGTGGTGTTCAACAGCGTCATCT
TCGGCCTGGTGATCCGATCGCTGATGGTGCGGAAGGTTCCCGGGGACGGG
TTCGCCACCCGCCGAAGGGACCGCGTGAGGGAGGCGCGGAGCGCCATCGG
GCTCATGGTCCTGCTTGGTCTAACCTACCTCTTCGGAAGTTTCACCGTTG
GCGACGCGCGATTGGTCTTCCAGTACATCTTTGCAATCACCAACTCCATC
CAGGGCTTCCTCATCTTCCTGTTCTTCGCCATCGTCCCTCTCTACAGACA
GAGGAGGTCGAATAAGAAGCGGTCTGACCTTCACAGCAAGATGCCCTCTA
GGAGTCAGTCAAAGATGTCAGTCGTGTCTCTAGACGTTTCCTCACGTCTT
CGTAGGTCGTCTTCACAATCGACGGTTGAAAGCTTCACGGAAGACTGTGA
AGCGGTGAGACGGAAGGTCGGCGCGCTTCCGGCTGTGAAGGAGGTCGACG
AAGAGCCACCGGAAACCGACGATGATGGCCGAACGAGTACGGATATTCCC
GACGAGACCCGAACAACCGAGGAACGAGAAAGTCAAAGATTTTCTGCATC
CACCATGACAGAGACTCTGAAAAATGACGATCAAAGCAATCCCAATTTTC
CGCCGTCCTCGCATGGCTACTGTACCCGTGGCCGTGCGTTTGGCCACGGG
TTCCTTAGAAGGGCCCACGTGTCTACCTCTGAAAGCGAAGTGGACTTAAC
TCTATGGGACGACGAGCAGTGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01947.3Blg01947.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01947.3-exon-Sc0000487-1570713199:9000..9306Blg01947.3-exon-Sc0000487-1570713199:9000..9306Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:10668..10837Blg01947.3-exon-Sc0000487-1570713199:10668..10837Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:13732..13930Blg01947.3-exon-Sc0000487-1570713199:13732..13930Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:14335..14337Blg01947.3-exon-Sc0000487-1570713199:14335..14337Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:14489..14643Blg01947.3-exon-Sc0000487-1570713199:14489..14643Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:14971..15079Blg01947.3-exon-Sc0000487-1570713199:14971..15079Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:15332..15807Blg01947.3-exon-Sc0000487-1570713199:15332..15807Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:16689..16853Blg01947.3-exon-Sc0000487-1570713199:16689..16853Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:17627..17776Blg01947.3-exon-Sc0000487-1570713199:17627..17776Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:17982..18061Blg01947.3-exon-Sc0000487-1570713199:17982..18061Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:18333..18432Blg01947.3-exon-Sc0000487-1570713199:18333..18432Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:18682..18769Blg01947.3-exon-Sc0000487-1570713199:18682..18769Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:19107..19242Blg01947.3-exon-Sc0000487-1570713199:19107..19242Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:19700..19976Blg01947.3-exon-Sc0000487-1570713199:19700..19976Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:20143..20188Blg01947.3-exon-Sc0000487-1570713199:20143..20188Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:20472..20575Blg01947.3-exon-Sc0000487-1570713199:20472..20575Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:21054..21187Blg01947.3-exon-Sc0000487-1570713199:21054..21187Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:21528..21678Blg01947.3-exon-Sc0000487-1570713199:21528..21678Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:22067..22178Blg01947.3-exon-Sc0000487-1570713199:22067..22178Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:22350..22416Blg01947.3-exon-Sc0000487-1570713199:22350..22416Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:22965..23164Blg01947.3-exon-Sc0000487-1570713199:22965..23164Branchiostoma lanceolatumexon
Blg01947.3-exon-Sc0000487-1570713199:23374..24734Blg01947.3-exon-Sc0000487-1570713199:23374..24734Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000487genomeSc0000487:9000..24734 +
Properties
Property NameValue
GeneIDBlg01947