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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000228:113071..119977- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01871.1 ID=Blg01871.1|Name=Blg01871.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6907bp|location=Sequence derived from alignment at Sc0000228:113071..119977- (Branchiostoma lanceolatum)
ATCTCGCCGGTGTCATGTCAAAGGTCAGGTCCTGGTCCAGCTGACGAGTT
GATGAGTTTGACACTGGTTTATAGGTACTATAAGTTACAGTTACTGACTC
GCTGTCTAAAGAAGAGATCGCAAGGTATAAGTTTTGTTTCTTTTAAGTGT
TATTTTTCTTTGTATTGGCTTCATCATGTAAATGATGACACAAAATGAAA
CCAGAAATGTTATTCTTGCTTGAAGAGACAGGGGGCGGGGCAGGTTTGCT
GCATAATAATTCTTCAGTGATCGTTTTGAATATCAACATTTCATCATCTT
ATATTGTATAACAGCATGGTTTTGTTCTTGTTTGGCGTCTATACAATCTT
ATGCAAATTTTGAACAATGTTTTCTCACGATCACTCTGCAAATTCATAAT
CAATCTCATGATCAACTAGAGTTCCACGACCTCATACCTTCGCCAAATGA
TTTTAACCTTTATGACTGACGTATTAGGAGTGTTTCTCATCAATCATAAA
TCATACCAGTTGATTGTCTTAAAATATAACATGTCCAAAGTATGAGCTTA
ACAAATTTATCATCAATTATGCAAAGGAGGCCGTTATTATCATAATTTGA
TTCAACGATGTTCACATTCACATAACGTCCCAATGCCACAAAAAAGGATT
AAATGTATGAAATTGCCGTCTTTTGCCAGTGTGGAATAATAGAAGTTACT
CATTAAGTATGCAAATAAGGCCCACATTTGCATATTTTCTATCTATCAAC
AGTCCTCTCTTCCTCAGTAACAATTTGAATTGTCATATCATGGAACAAAG
CGGATTTTTAAAGTTGCCTTATTAATTATGCAAATTAGAATCTGATTTGC
ATAATTATCGTCCAATCATACTAAGCATCACAAAAACTATCCACATACCA
AAAATCATGACCATCCATCAAGGCCATCATGTTATAGTATTTTTGCATCA
ATTATGCAAATGAGGTCTTCATTTGCATAGTTCATATCAATTAATATTTC
TCTCTTCCTCAGTTACATATGTCACATGTTTCAGAGTCCTATCATGGAAT
TTGGCGGATGTATAAACTTTCCTCATTAATTATGCAAATTAGATACTGAT
TTGCATAAGACGTGTCTAATCATGTACATCATCACTCAAGCTATCTACCT
ACCAAAAATCATTACCATCCATCAAGCCCTTCTTGAGTTATTCCCTTTCA
AAGTCAGATGCAAAACCTGCTCCTGCAGTTCCAAAAAAACCGCTAGGGGG
CCCAAACCCACACCACTTACTCTCTGTCCAAAGATCTATCTACCACTCAA
AAATCAGTTCCATAGCATGTCCAGAACACGAGATATCAAAACAGGAAGTT
CCGCTGCAGTACCGTAAGAAGCCGCTAGGGGGCCCGAAATCTCATCGTTT
TTAGGTCTCATCAAAACCTACCAACATACCAAATACCAAGATAATCCATC
AAGGCATTCTCGAGTTATCCTGTGCCACTACAAACAAACAAACAGACAAA
CAGACAAACGCTACCCTCTGCATAACCTTCTTGGCGAAGGTGATGACAAG
TGAACGTATATAACGTTATGATATTATTAAAGAAGTCTCACTATAGTATA
AGCAAGTGTCATACAGATAAGTGTATTAGCTAGAGATTACAATCACCTCC
TCTTTATTGTCCTTTTAACAAGTCCTTTGTGGTCTCAAGCCCTGTATTTT
GGAAGACACAATTGTGAAATCAGTTTGATGGAATCATAAGATAACAAATG
ATTGATGACAGGCTATTCTTTAATATGCATATTCGACAAAATATCTCCTT
ACCTTTGATACAGTATGCAGACATGTACATGTAGACCTGGGATCAGAGTT
GGAGGCACATCATTTTGAAAACATTAATTCAACAACTAGTGTAAGGTTGC
ATATCAATTACATTGATTATATTATCATGTTAAACTGCGTATAGGAAGAT
TTACACATGAAGCATGACAAAGGATTTGATGTAAAAGGTAACGTTAGACA
GGTCTGACACTAAAATTAAAACAGTAAAATATCATTGTCTTGTCAAAGCT
TCCTCCGTCATGTTTTCCCTCCTTTCAAGTTCTACAGTTGTACATTAGAC
AGTGAGTTCATGGTAAAGTTTCTGAAGAATTCTCTCCTCTACAGACAGGA
GAGCCATCCATACTAGCACCATGGAGGATCTCCTGAAGAGAGAGCTAAAC
ACGACAAAACTCCGACCCATCGGTGGCGGAGGTGGCTGCATCAACCATGG
CGAGGGTTACGAGACCGATCACGGGAAGTTCTTTGTCAAGATGAATGGTG
ATAAGGGGGTAAGGTATTACCTGGTCACCAGTCTCTACGGGCCGGCTTAG
GGACGTTCTATCATGCTCAGTGTGCTTAAGTCTTTTTAGCTGGGACATAG
ATCGTTATCGAGTCAGGAGCGAACGAATTAAGCCAAGCCTGTAAAACCAC
CCCTCATGCGCACTAATCTGTTTGGGCGAGCATCACTCCCAGCGCTGTAG
ACATACCGGACAGGTCCCAATGGTATGGTTACCAGGCTATGGGTTCGTTG
TGCCGATCATGAGCTGTTGTTTCTGTTCATTCAGCCCTCATGATGTCAAG
GAGCAATCAGTAATCCTATTAGTTAATTACTAGTATAGTTGACCTTGATG
CTGGTACATATTGCTTGATTAATCTTATAAGTTATAATTGTAACTGTTAT
TTTGATGAGTTACCTCATCATTATTTGTTCAAATTCAATGATATTTGGAT
TTGGCATCTGGAACTTGAAGCAGTAAATACAAGATGGGCAGTTGCCGAGC
AATTAAAAAGTCCTCATGGCCTGTGACTGACTCTATTGTTTATGTAATTT
AGGACATTTAGAGTTTAAGCCTGACAGTCTGTGCTTATGACTTTTTTGTT
TACCAGGCTAGAGTGATGTTTGAGGGAGAACATGCCAGCTTGGAGGCCAT
AGCAGCTACTGGTACTGTAACTGTACCTAAACCTATCAAGGTTAGAGGTG
TTTTCATTTGTTTCACTCTCTTTTGTTCCCCTCTCTCCATCTCATCTATC
AATTTTATGCTGGTAAGCGTGCATTCTTCTCTTTGTTCTTTGAAGACTAA
GAAGACAGTCACTATCACAATATTGTTTCAGAATTGTTAGTTAAAGTTAA
AATCCTCCCACACCATAAGGTGTATAGGGTGGTGCCCATCTCCGTTTCAT
AGCCCTGGGCCACACTGTGGTGCAATCACTGCAGCAGGGGGCTAGTCCAC
TGGCAGTGGAGTGTGTTCCATACTGTTTCAGAAGTATGTACCATTTTTAT
AAAGTCTTTGGTATGACTCAATGCGCCTCTTGTCCAGAGGTGTCCTACCC
GGAACCCCGGTCCTTCTGGTCCAAGTAATTTGAACCAGATGTGGCTAGTA
ACAGAAGCGCAGCCCACTACACCACAGGGACACCCCCTGTTTCAGAATTG
TATTGGACTTAATTATAATTATAAGCTAACTGGACTAGAAACTTTCATCA
ATAAGCCTGTTCTACAGGTTTTAGATGACCCAAGAGGCAGAGGAGCCATG
CTGATAATGGAACATGTGGACCTGGGAGGCCTTAGGTCGTATGCTGACCA
GTTAGGAGAACAGATGGCAAGGTAAAAGTCATTGTATTATGACTGTGAGT
CATATATATCACTTTCTGTGCAAGATATATCATTTCTTGAAACATTGTGA
ATTTGGGAAAGGGTGCATCTATCTTTTACCTTGTCCTTTAGTTAATTCTC
CATCATTATCAGTTTTTCATTAGTGTCTATTCATCGTTTTGTTCTCTTCA
GCCATATTCTTCCAAATATTCAGAAACCTCAGTTGTCAATGAAGTACTAC
TAGTACACATGTTACCAAAGTCCTGAAAAACATCAGATAATTAACCTCCA
TTAAAAATCCACCGGGTTAGATAAATCTGCTACTTTGAAAAATAGTGGGT
TTGAAAGATCTCTAGTGAGTTAACAGTTATTTAGTTAGATATATAGGAGT
GTATTATACTGGGGACAATAGGTCGGAGATCTGTTTGGACAAATCTTTTC
AGGGTGGCGGAATTACGTACCCTGGTGGAATTATGTTAGTAGATGTTACT
CATTACCCTCTAACCTTGTATTGCAGGCTGCATCTCCACAATGAAGAAGT
GGCTAAAAAGGCATCCGCTGGTTCGTCCAGGGTTGGACAAGGCGGGGACG
CAGCGCCAGCGTACGTGTCCCAGTTCGGCTTCCACACGACAACGTGCTGT
GGCGCCATCCCCCAGGATAACTCATGGTCAGATGACTGGGTGGTACGTAA
TAATTGTTTAACCTTATAATTTCTCCTACGGTTACTTGTTCAATGTTCAA
GTTCAAGTAATACAAATAGATCTAATTAAGTAAGTACATGAGAAATACAT
ATGGATACAAAAAAGCAAAATGAATATTGGCATCATAGTATATTCTACAT
TGTATGTCTGTTTGTCTTGTCATATATGTTAGAGTCGTAGAACTTAATAT
CCAAACATTGAAAAATGTTGTTTTTCTTTTCAGTCTTTCTATGCAACAAG
GAAACTGAAACTCCAGTTGGACCTGGTTGAAAAAGATGTGAGCCTTTTCT
CATTTCTCTTAATCAATGTCCTCAGTGTTGTGTCATTTTCATTGATTACT
TGATTGATTGCCTAAATTATGAACTTTGAACTACTGCCTCCTGTCACACC
AGTACCAGGATACATCATCATGGTCTCAGAACCAATAGGTCCAGAGTTTG
ATGCTCACCCTTCCCCGACGTTGTGCCCTTGGGAAAAGGCACTTAAAACG
ACTTTCCCTGGCGGTGGAGTAACGCCTACCAAGCCTCTTCGGCTTATCTG
ACTAAAAGTGTGCCAAAAAACACACTACGGATTTATTTACTGATGTGTCA
ACATCTAGCGTATTTGCCACCAAGAACTGAACAATTTTTTTTTAGTACCA
TGATAGAGAGACCCGTGACCTTTGGCCCCAGCTGGAGCGGAAACTGCCCA
AGTTTTTTGAGGGTCTGGAAGTGACCCCGTCGCTACTGCACGGCGACTTG
TGGGGAGGTAACGGTGCTGAGAACGACAAAGGACCAGGTGAGCATCAAGG
TCAAAATCATTGTCTTACTGATCTTCTTGACAGAGGTAGTAGTAGTAGTA
GTAGTCCACTGTGTTCTGCTGCAGTGGTCTGAATATCCTGCAGCTACATT
CAGTCTTTCTTCAATTCTCTCCACTTTGTCCGATTCATCACAAAATTCCT
TAGCTCCCATAGTTTTCTTGACAGCGGTAACCTCCATTATAAACATTAAT
CTGCCGGGTTACATAAATCCACCACTTCAAAAACAGTGGGTTTGAGAGAT
CTCTAGTGCAGCACTCCTAGGTATGCACAGTATATATATATATATATATA
TATGAGATATTATGCATAGGGTTGGAGGTCTGTTTGATTGCATATCTGAT
GCATATTTCTTCCTTTTTTATGCAGTCATATTTGATCCAGCATCCTTCTA
TGGACACCATGAGTATGAGATGGCTATAGCCTCAATGTTCGGAGGATTCG
GAGGAAGGTTTTTCTCAGCATACCACAAACTCCTTCCTAAAGCTTCTGGC
TGGGAGGCCAGGCACGAACTGTACAAACTCTTCCACTACTTAAATCACTG
GTGAGTGGGAAGCATCAATCGTAGGGCTTAAAATACAGGGTGCATATTGC
ACTTTTGTGCACCCAAAATTGGAGCTGTGCACTGGTGCACCTTAAGATAT
TTGCATAGGGTTAGCTTAAAGCTATAGGAAGTGAGATCTATATGATACAA
CATGTATATACACATATAATTCCACAAATGTTAGAAAAAAATTCTAAAAT
TTTTCTTGTATTTCTTGTATTTTGTTTTGCTGACATTCTACTTTATTTCA
TGTTGTGCACTTGAATCTTTAGGTTAGGTTCACCGGTGCACCTATTCCGA
AAAATATGTTTCGAGCCCTTATCATATACCTGTATTCTTGTATTTTTCAG
GAATCACTTTGGGTCAAGCTACCGAGGATCCTCAGTCAGTATCATGAAGA
GTCTTGTTAAAGACTATTGATGTTCCTGTGACAAGAGATCCTGTAACTGT
ACCTTGTGATGGAAGTTAGATATTGCTCCATTGTTGAAAGGCCGCATCTG
TCACAAGTCACGTTGAATATGGAAATTGTTACTCGCTGCACAGTAACATT
TCACATGCTGTTTTGAAAAGCTTGCTGCCTTGAAATTGTATATATATTCT
ATTTGTTTGAATTCCTTTCCTAGATCCTATATCTTTGAAGAAAGTTTTTA
TTGCAACCGGTTGTCTCAAAATCTCACTCACCCTTGAGTAAAATGCTGGG
CATTGCTGTCAAGCCAAGCAGGAAATAGTTTAATCCGTCCTCCTTTGGAA
ACCAAGTGGCCGACTTGCAGAAGTATGACTTTTACTGACACTTTAAGCTA
GAGACACTGGAATTGAATATGAGAACCTAGATAAAGTAATGCTTGACATG
GCTATGTGGAGTGGAATATGTACTAGCTTGGTTCCGGCTGATACAGGCCG
ATAGATGATGATGAGAGACACTGGGTTTGACATAGAGGACCTGGGAGCAG
CTATGGATGATCGAGTGGAGATAAGTTGTGAGCGGACTCACCCTGGCCCC
CAGGGTCGACAGGTGATGATAATGATGATGTTCTTCTGGTGTATTTCATA
CAGGTGCCTTACATGTACAGCTCCAGTATTATGCTTGCACACGTCTGGTA
CCTTGGAGTCCAAAATGTACACTGAAAATACTGATGCAACACTTTTGTTT
TCTGCTCATACTTTTTTTAATGAGGCGAAGTAAAAGATGTTAAGATTATG
ATATGTACAGCACACAAAAGGCTTTTGTCTGGTTAATAAATGCATATGTG
TATTTGC Coding sequence (CDS) from alignment at Sc0000228:113071..119977- >Blg01871.1 ID=Blg01871.1|Name=Blg01871.1|organism=Branchiostoma lanceolatum|type=CDS|length=1032bp|location=Sequence derived from alignment at Sc0000228:113071..119977- (Branchiostoma lanceolatum)
ATGAGTTTGACACTGGTTTATAGGTACTATAAGTTACAGTTACTGACTCG
CTGTCTAAAGAAGAGATCGCAAGACAGGAGAGCCATCCATACTAGCACCA
TGGAGGATCTCCTGAAGAGAGAGCTAAACACGACAAAACTCCGACCCATC
GGTGGCGGAGGTGGCTGCATCAACCATGGCGAGGGTTACGAGACCGATCA
CGGGAAGTTCTTTGTCAAGATGAATGGTGATAAGGGGGCTAGAGTGATGT
TTGAGGGAGAACATGCCAGCTTGGAGGCCATAGCAGCTACTGGTACTGTA
ACTGTACCTAAACCTATCAAGGTTTTAGATGACCCAAGAGGCAGAGGAGC
CATGCTGATAATGGAACATGTGGACCTGGGAGGCCTTAGGTCGTATGCTG
ACCAGTTAGGAGAACAGATGGCAAGGCTGCATCTCCACAATGAAGAAGTG
GCTAAAAAGGCATCCGCTGGTTCGTCCAGGGTTGGACAAGGCGGGGACGC
AGCGCCAGCGTACGTGTCCCAGTTCGGCTTCCACACGACAACGTGCTGTG
GCGCCATCCCCCAGGATAACTCATGGTCAGATGACTGGGTGTCTTTCTAT
GCAACAAGGAAACTGAAACTCCAGTTGGACCTGGTTGAAAAAGATTACCA
TGATAGAGAGACCCGTGACCTTTGGCCCCAGCTGGAGCGGAAACTGCCCA
AGTTTTTTGAGGGTCTGGAAGTGACCCCGTCGCTACTGCACGGCGACTTG
TGGGGAGGTAACGGTGCTGAGAACGACAAAGGACCAGTCATATTTGATCC
AGCATCCTTCTATGGACACCATGAGTATGAGATGGCTATAGCCTCAATGT
TCGGAGGATTCGGAGGAAGGTTTTTCTCAGCATACCACAAACTCCTTCCT
AAAGCTTCTGGCTGGGAGGCCAGGCACGAACTGTACAAACTCTTCCACTA
CTTAAATCACTGGAATCACTTTGGGTCAAGCTACCGAGGATCCTCAGTCA
GTATCATGAAGAGTCTTGTTAAAGACTATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01871.1-exon-Sc0000228-1570713199:119854..119977 | Blg01871.1-exon-Sc0000228-1570713199:119854..119977 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:117670..117833 | Blg01871.1-exon-Sc0000228-1570713199:117670..117833 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:116988..117071 | Blg01871.1-exon-Sc0000228-1570713199:116988..117071 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:116357..116460 | Blg01871.1-exon-Sc0000228-1570713199:116357..116460 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:115686..115851 | Blg01871.1-exon-Sc0000228-1570713199:115686..115851 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:115391..115444 | Blg01871.1-exon-Sc0000228-1570713199:115391..115444 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:114891..115032 | Blg01871.1-exon-Sc0000228-1570713199:114891..115032 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:114328..114502 | Blg01871.1-exon-Sc0000228-1570713199:114328..114502 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:113627..113977 | Blg01871.1-exon-Sc0000228-1570713199:113627..113977 | Branchiostoma lanceolatum | exon |
| Blg01871.1-exon-Sc0000228-1570713199:113071..113575 | Blg01871.1-exon-Sc0000228-1570713199:113071..113575 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:113071..119977 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01871 |
|
