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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000333:127281..133213+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01842.1 ID=Blg01842.1|Name=Blg01842.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5933bp|location=Sequence derived from alignment at Sc0000333:127281..133213+ (Branchiostoma lanceolatum)
ACAAACCTGGTGTGTTATGCTATGAAGCAAACAAACAAAGTATTGAGTGA
TACCCTCAGGTTAGTAGTCTATATTGAAAGGTACAGGCATCCATGGCATA
TTGTTATAGTGCAGTGACTTGAGTTAAAACGAAAAACTGGTTCCCTTCAA
AAAAGGTGAAGGCTTAATTCAACAGGAACTAGCCCGGGGGAATTCTTAGA
AGTTAGAAAACCTTTGTCACCTATCACAGTCTCTCTTTGTTTGGGTTTAT
ACTATTTTGTCTCTGACAATTTGTGGCAATCCATGAAATAATTCAGGGGA
TTTGTGATATGAAAATTAAATACCAATAGGAAGCTAGTATCACCAGTATC
ATATCATAGCAGTGGAATCACCACAGAAACAGAACTGATTCATAATTAAA
TCATAAGTAATGGAAAAACAACTGCCATAGCTATATTTCATACGTAAGTG
AATATCAAATGATAATAACTGGTCAATCACAGCTTGAAGTCTAACATAAT
CAAACATCAGTTAAAAATGTTTTCACAAATCAACCACGTGCACATTGAAT
GGACCTGATTTCCTTAATACATGTGTATTGCACGGGTTGGGTTGTGGTGG
ATTTGTGCGAACGTCAATAGGTGAAGGGATGGGTTGGTTAGATAACTTTT
GCTGGTTAATTGTTGGTTGGTTGATAAGTTGTTTGGTTGGTTTGTTAGTT
AGTTAATAGGTTAGTTAATTTGTAAGTTGGTTGGTCCAGTGGTTGTTTGA
CTTTTGAGCTCTCCAAAGGCAGACTGATTGGAGATTTTGTCTTCAGTCAT
ATGGGTATTTGTTGTCAAAAACATGACAAAAATTTGTAATGTTTCTCATT
TCCTTTCAACTTGTAACAGGTTCTTGGAGATCAAGCCCTTGGAGGACATT
CTGATGTCAGACCTTCAGACGTCAGAAAACAACAACGCAACCTCAAACCA
AACAGACAACGAGACAGCCAACGACAACGAGACAACCAACTCCTGCAAAA
AGGTTGCCCTGTTCCCCTCACCACGCGATCACGCAGAGGGTGAAAACGGG
AGTGAACGTAACAACGATACGCCTCTAGATCTCAGCCCCTCGCCGTCCAC
GAAACACGAGGAGAAAACCGTAGAGTCTCCGTCAACGCCTGTCTCTCAAG
CGTCGAGCCCGCGGCGGACGCGGAGGCAACGGAAAAACCCGAGGCCTCAC
AAGGTGCGATCGTCCTCCGATCTTCACAGTCTGCCAGACGACACTCCTAT
GAATGACGATGACAAAAACGTGCAGAAAAATTCTGAAGATACAACGAGAA
ACAAAGACAAGGATGCGAGAAGTCCTGACGACGATGTCTTGGCAGATACA
ACGTCTTCAAAAGTTGATGAGACAGCCACAGACAATTCAAGCAGCAAGCC
CTCCCCTCCAACAAACGGCACAGGGCTTGAAAACATCAAGATAGAGAACA
CTTTCTCTCTCCACGGGATGGAAAACTCCTTCAACTTGAGGGCGTTGACG
GGAAAATGTCCTCCTAAATACGCAGAAGTCGTGCCTCCGAACGTGACGGT
GGGACAGCACATCCCGAACGGACCAATCACCAGAAGTCATGCTTCCAACG
TTAACACAACCACTTCCAGTACAACATATCCTCCCGCCACAGTGAACCAA
CTCACAGTAAAGACAGAGAATTCGGACAGTTGTGCCATTACTAATACTTC
ACAAGTCATCAGCCCCGGAGTCGTCCGTACCAATAGCGCCATCAGGCAAG
TTGCAACGGCGCCAGTGCCATACCTACAGCCAGCAAATCTAAACCTGAAC
GCACTGAACAACATCGCAGCACAGACTGGTAGTGGGGTAGCACAGTGTAT
ACCGCAGGTAAACCAGCTGCCTGGTGGAGCAATCATACACCTCATCCCTA
ACCCCATCGGCCTGAGCCCTGTCACACCTCTACTACAACAGTACCCCTTC
CAGCTAGTGACAGCTCCTAACAGTAATGTACTGCTACAGGTGGGTGGAGC
TACATTATGATACAAATTTTAAACTGATGTTAAAGTATTTTCTTTGTGAG
CAATGCTGCGCTTTCTCCAGCTTGAAATCTTTTTTCTGTCCCACTCATTG
TTTGGGAGCCCGTGTGGTTAACTGTCATTGTCAATTCTGTCATTTTGTTA
GCTTATGAAAATACATTTTCATCAGTTTCATGTCATGGAGATCAGATTTT
TTGGATGGACATTTTTGTGCGTCCCAACAAGCAAATTTCCATCCCGGGAT
GGAGGGATGGTTCATGGTGACAGCCCTGAAACAATGTAGTGACTGTATTC
TGACACCACAAATGAAAATTTGTATTATAATACTATTAATAGTATTTTGG
AGAATCAAGACGTTATATATGTATGACTGGTTTATTCGTTTGAATCTCTC
TTCGCAGCCCAAAAGTTGTTTTCAGCCACTTCAATTCTTGTGACTTCTTC
GCACCTATAGATAATCACCATAGTTTACCAGAAGCAAAATTACAAGACTA
GTCAAACTTTTTATGTAAATACCAGGGTCTTGACATTTCTTAAGAGTGCT
CTTCAACTCCCAAAACCTTAGTAACCTACTATCAATGGTGGGGTTTTGTA
TAAATCAAAATGGAACAGGTGGTTGAAAAAAATCCCTTATCATTATCTAC
ATTTTTTGGGGGCCCCATTGACAGATTTCTAACTAAGACTGGTAAAAGAG
ATGTTCCTATTGCTCACTAGTAGCTGGCCTTATATCCTGAGTTTGATTAT
CATTACAAATTTGATTAAAGCTTTCCCATAATCAGATGGGACGAATCCCT
GTATAGGATGCAATAAATGTCTCGGACCAAACCATAATCCACTTCTAGTC
AATGGACAGTCTAGCCTTACCAGATAATGACTGTCAACATGTATCATTTC
AAGGGACTACTGAGTATCAAAGATATAGAGATAGATATAGATTGAAATCT
CCAGTAAAATGTTGCTCTGCTGGTAAATCTAAGGAGGTTAAATCTTAATC
ATAAAACAAAATGGAAGCATCTCTACGAAATATTTGGTTAAATTCGATAA
AGAAAGTGACTTTATTAGATATTATGTACATGTATAACTATAAATATATA
GAGATCTAGAAAGAGAGAGAGAGTCATTAGCTAAAATCTTTTATCATTTG
TTTGAATTTCTTCTTACGCCACTTGAAAGAGCATACTTCATACTAGATTG
TAAAGTTAAGTAAACCACATTTTCTTATTTCTGTCATAAGAAGTATATTC
AATACAAAATTCCATATTTCTAGACATGTCCTTTGCCTGCTAAAAAGGTG
AGCTGTTCAGACAAGGCACCACAGGGAGAGGTACACAGTCCGACAAGTAC
AAGTGAGGTTAAAAACACTGACAAGAAGACACAACAGAACACTGATCAGC
AGAACGTTCTACAGGCACTGAGAGTCAACCAGCGACCAGACCAGGAACAG
GTGGGTTTGTTTGTTTGTTTGTTTGTATAATTCCCTGGCAAAGAAAAACA
GGGTAAGACCAGATGGCATAACATGCATCGGTAAAAAACATTTTGAAGTA
ACCCATTCAAAAAGCGTAGGAGACAGGGAACTTAGCTGACACACATACAC
TGACACAGTGCCAATTTTTTTTTGTGCAAAATAATGTCGTTGTGTTGGTT
TGACTGTACATGTGTTTAGCCCAGAACCCAGAAATCCTGAGTTCGAGTCC
CAAAACATGCCACCAATGCTGTGCCCTTGGGAAAGGCTTTTAACTTAGCT
TTCCTCACTCTTTCCAGATGTAAAAATGGGTACCTGACTTTGGCTGGGGA
AGTAAAAGGCGGTGAAAGGAAAGGGTTGGGCTCCTTCTTCCAATACCGTA
CCCTAGATACAATGGATAACAACCCACTGCCCCTATGGCCTTAAAAATGG
GACTACCTTTACCCATACCTTTTTTGCGTTTCGACGCCTTCGCGCCGGAA
CGCAAAGTCCTGGCTTTTACCTTCGATGCAGGATGCTTCGATGCATGCTT
GCTGTTTGGTTCAACACTGTGTCGCACACCAGAAGACCTTATATGGCAAT
ACGTTCCCAAATCCTTGTATAGCCGTTGCCTTATATGGCAAGGGAGCACG
AAAAGGCAGGCAGGCTAGATTTGCATGACACACAGGAGGGCGACCGCATG
TAACTGCTACAACTGTTCGGAAATATCATTGCATTGTGGTTTCGGACTTT
GATATCCTGAAAAATGACCATATTACATCTATTCCACAAGATTGCAGAAG
AAAAAAAATGATTTCGTCAAGAAAACGACCAAAAATCGGCATAAATGATA
CCATATAGTGAGGTTATAGCATTACGTCCAGAGTGAATAGTTACGTACCG
CAGCTTGGCCGATCTGGCAACGCGAAGCACTTCGGACCCAGAAGATCCGG
GTTCGTCTCCGTGCATGGATTTTTTTTTTCTTTTTAGATATTGAATATCA
AAAATATATATTGATATTATATTAATCTATCAATATCATATTTATGAATA
TCATTTTTTTTCATTAATAAATAAAGAAATATTTTATATTTGTTATTTTT
AAATATTCATTTAATATATACAAGGCCTTTGTCTTATGAACAGGACTTCA
TAGATTCCAAACCCGGCATTCGAATTTTTCTGTTCATTGTAATGGAAAAT
ACCGTGCAGCGGCTCCTATGCGCGGTAAGATGATTCTTGCAAAACACTCG
CCACTAAACTTCTATCCCCGATGTAAACAGAGGCTCTTGATGTTGTTTGC
AAAACAGCGATTCTTTGTTACAGTAGCAAATGCTCCATTGTTCAGTATCG
ACTTCATTCAGACAACACGGACGTGGAAAGTGGCGCCCCTCGGCACAAAA
CTATGGGAATTTTCATGAATTTTAGCAAAATTACCCAGGAAAATAAGGAA
GAAATGTTGTAAATGCGGAAACCAGAATAATACGGATGAGGTAGCTGTTG
ATTTGTTTGACATTTGGTAGTCATTTTAGATAGAACCTTAGCTGTTATGA
ACTTCTATTTCACTTAATTACCATAGTGCTGATGATTCAATGGTGCTTTT
TCAAATTTTATGTTTTATTGCGTGCCATGTACATAATTACATTGATAGCT
TTTATAATGAGCCTATTATACATTTTACAAATAAGTACAAGTTGTAGGCC
AAGACCAGCTTTTTCAAAAGCACTTAAGTTAAGTGACGTAACTTCAAAAT
TGCTTTCCCCAATCTGCCTTTCTCTATTAAAACAGTACTCATTTCCCAAA
ATGACAATTTTTCTTATAGACTGAACAGCCCTTGAGTGACTTCCTCTGGC
AGATTTTACTTCAAGTAAAGGGAAAAGACAATTCACACTCATAAACGTAG
CCGAAACGCCAGCTTTTTTGAAAAGCTCTTGTTTACCTCCATCCCATGGC
CAGGTAGGACAGCCCCACCTGAACATCCCCACCCTGGTGAAACTGGTGCT
GGTCTCACAAGCCGACGAGCTTGGAGAACCAGACATCCTCGCTCTCATGA
AGCGCATCAAGCCCTCCATCGAGACCGAGTACCCGCCCTCCGTCCTCAGA
ACTAAGGTCAGCGCGGCACTGGACTGCGGACACCGCGAGGGAATCTTCAC
GAGGAAGCGGGACATGAACCAGAGGCAGATCTGGGCCATCAACGCGGCGA
AGCTGAAGCCGGTAGTGGAGGAACTCAGGTGGAACGTGTACCGACATACC
ATCTACAAACACTCTACCATAAACAACTAGCTAGCTGTAGATAGCGTAAG
TTATAGTCGTATCGGTATAAAAAGGTATTTTGTGTCAGTAGATAACATTG
TAACAATTTTCCTTTTCTGTGAAAACAAAGGATAGATTCAACAAGTTGAT
TGTGAACCGTGGCCTCAGAGGAGGGGAACAGAAATGGTTGAAAATCAGGA
GTTACTGTGAATGCATTTAAGTTTGCGACGGTT Coding sequence (CDS) from alignment at Sc0000333:127281..133213+ >Blg01842.1 ID=Blg01842.1|Name=Blg01842.1|organism=Branchiostoma lanceolatum|type=CDS|length=1671bp|location=Sequence derived from alignment at Sc0000333:127281..133213+ (Branchiostoma lanceolatum)
ATGACAAAAATTTGTAATGTTTCTCATTTCCTTTCAACTTGTAACAGGTT
CTTGGAGATCAAGCCCTTGGAGGACATTCTGATGTCAGACCTTCAGACGT
CAGAAAACAACAACGCAACCTCAAACCAAACAGACAACGAGACAGCCAAC
GACAACGAGACAACCAACTCCTGCAAAAAGGTTGCCCTGTTCCCCTCACC
ACGCGATCACGCAGAGGGTGAAAACGGGAGTGAACGTAACAACGATACGC
CTCTAGATCTCAGCCCCTCGCCGTCCACGAAACACGAGGAGAAAACCGTA
GAGTCTCCGTCAACGCCTGTCTCTCAAGCGTCGAGCCCGCGGCGGACGCG
GAGGCAACGGAAAAACCCGAGGCCTCACAAGGTGCGATCGTCCTCCGATC
TTCACAGTCTGCCAGACGACACTCCTATGAATGACGATGACAAAAACGTG
CAGAAAAATTCTGAAGATACAACGAGAAACAAAGACAAGGATGCGAGAAG
TCCTGACGACGATGTCTTGGCAGATACAACGTCTTCAAAAGTTGATGAGA
CAGCCACAGACAATTCAAGCAGCAAGCCCTCCCCTCCAACAAACGGCACA
GGGCTTGAAAACATCAAGATAGAGAACACTTTCTCTCTCCACGGGATGGA
AAACTCCTTCAACTTGAGGGCGTTGACGGGAAAATGTCCTCCTAAATACG
CAGAAGTCGTGCCTCCGAACGTGACGGTGGGACAGCACATCCCGAACGGA
CCAATCACCAGAAGTCATGCTTCCAACGTTAACACAACCACTTCCAGTAC
AACATATCCTCCCGCCACAGTGAACCAACTCACAGTAAAGACAGAGAATT
CGGACAGTTGTGCCATTACTAATACTTCACAAGTCATCAGCCCCGGAGTC
GTCCGTACCAATAGCGCCATCAGGCAAGTTGCAACGGCGCCAGTGCCATA
CCTACAGCCAGCAAATCTAAACCTGAACGCACTGAACAACATCGCAGCAC
AGACTGGTAGTGGGGTAGCACAGTGTATACCGCAGGTAAACCAGCTGCCT
GGTGGAGCAATCATACACCTCATCCCTAACCCCATCGGCCTGAGCCCTGT
CACACCTCTACTACAACAGTACCCCTTCCAGCTAGTGACAGCTCCTAACA
GTAATGTACTGCTACAGACATGTCCTTTGCCTGCTAAAAAGGTGAGCTGT
TCAGACAAGGCACCACAGGGAGAGGTACACAGTCCGACAAGTACAAGTGA
GGTTAAAAACACTGACAAGAAGACACAACAGAACACTGATCAGCAGAACG
TTCTACAGGCACTGAGAGTCAACCAGCGACCAGACCAGGAACAGGTAGGA
CAGCCCCACCTGAACATCCCCACCCTGGTGAAACTGGTGCTGGTCTCACA
AGCCGACGAGCTTGGAGAACCAGACATCCTCGCTCTCATGAAGCGCATCA
AGCCCTCCATCGAGACCGAGTACCCGCCCTCCGTCCTCAGAACTAAGGTC
AGCGCGGCACTGGACTGCGGACACCGCGAGGGAATCTTCACGAGGAAGCG
GGACATGAACCAGAGGCAGATCTGGGCCATCAACGCGGCGAAGCTGAAGC
CGGTAGTGGAGGAACTCAGGTGGAACGTGTACCGACATACCATCTACAAA
CACTCTACCATAAACAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01842.1-exon-Sc0000333-1570713199:127281..129269 | Blg01842.1-exon-Sc0000333-1570713199:127281..129269 | Branchiostoma lanceolatum | exon |
| Blg01842.1-exon-Sc0000333-1570713199:130554..130730 | Blg01842.1-exon-Sc0000333-1570713199:130554..130730 | Branchiostoma lanceolatum | exon |
| Blg01842.1-exon-Sc0000333-1570713199:132684..133213 | Blg01842.1-exon-Sc0000333-1570713199:132684..133213 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000333 | genome | Sc0000333:127281..133213 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01842 |
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