Blg01809.0 (mRNA) - B. lanceolatum

Overview
NameBlg01809.0
Unique NameBlg01809.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000098:319126..321881-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01809.0 ID=Blg01809.0|Name=Blg01809.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2756bp|location=Sequence derived from alignment at Sc0000098:319126..321881- (Branchiostoma lanceolatum)
ATGCTGACACAGGAAGCGCAGAGGGCACTCATCGGTTGGGAACCAGTCAG TTCACGCATAATCACTGCCAAGTTTGCTACAAAGAAGAGTAACATCAACC TGAATGTCATACAGTGCTATGCCCCTACCAATGATGCTGAAGAGGAGAAG AAGGATGCCTTCTATCAGCAACTTCAAGCGGTGTTAGACAAGAGCAGAAA CAAAGACAACAAAGACATCACTCTACTAATGGGCGACCTCAATGCCAAGA TAGGTTCAGATAACACAGGCCATGAGGAGGTAATGGGAATGGAAGGACTA GGTAAGATGAATGACAATGGGGAAAGGTTTACAGACCTGTGTTCACTCAA CCAACTTGTGATAGGAGGTAGCATCTTCATGCACAAACGAATCCACAAAG CCACATGGAGATCGCCAGACCACATAACAGAGAATCAGATAGACCACATG TGCATCAGCCAGAAGTTCCGACGACTGTGGAGTGATGTAAGGGTGATGAG AGGGGCAGATGTGTCTTCAGACCACCACCTTCTGGTGACGTCAGCACGAC TGAGGCTGAAGAAACACTCTACAACCACCAACCCACGTAAAAGATTCAAC GTAGGCCTGCTCAAGAATAAGGACATACAGACAACATTCAAACTCAGCCT GTCTAACAGGTTCCAACCACTACAGGAACTGTTTAAGGAGGAGGACACAG ATATTGAGAACCAGTGGCAACTGGTCAAGAAGGAGTGGCTGGACACATGT GAGGAGGTCTTGGGCAAGAAGAAACCACAACACAAAGAGTGGATCTCCTT CAGCACTCTGCAGAAGTTGGAAACAAGGAAGCAAAGGAAAGCTGCATTGA ACACTAGCAGAACAAGATCAGAGAAGGCAAAGGCACAGGAAGCATACACT GCTACGGACAAGGAGGTCAAAAAGAGTATTAAAAAGGACAAGAGGGACCA CTTCGAGGGCTTAGCTAAGCAAGCAGAGGAAGCAGCGGGAAAAGGAAACC TGAGGGACCTGTACATGACAACAAGGAAGCTAGCTGGCAAATTTCAACAA GTGGATAAACCAGTTAAGGACAAGGATGGCAACCCCCTCACAACAACAGA AGAACAACTGAGACGATGGGCAGAGCACTTTAATGAGCTGCTAAATAGAC CAGCCCCAGAAGCACCTCCAGACATCCCACCTGCAGACTCAGAGCTACCT ATAAACACTGGAAAACCTACAAAAGCAGAGATCAAGAAGGCCATCATGTC CCTTAAGAACGGAAAGTCAGCAGGACCAGATGAAGTACCAGCAGAAGCCC TGAAAGTAGACATAATGAGCTCAGTCAATATGCTGCATAGTCTTTTCAGT AGGATATGGGATGAGGAACAGGTTCCTGCTGAGTGGAGAGAGGGTTTACT AGTCAAGCTGCCTAAGATGGGAGATCTCAGCAATTGTAACAACTATAGGG GGATTATGCTACTATCAACAGCAGGTAAAGTTTTCAACAGAATTGTCCTA GAGAGAATGAGGGATGTGGTGGATGCCAAGTTACGAGAAGAGCAGGCAGG CTTTCGAAAGAACAGGTCCTGTACTGACCAGATTGCTACCCTACGCATCA TTTTAGAACAGTCACTTGAATGGAACTCTCCTCTTTACATTAATTTTATA GACTATGAGAAAGCTTTTGATAGCATAGACAGAGACACCTTGTGGAATTT ACTAAGACACTATGGGATACCAGAGAAGTTTATATCTTTAATCCGGAGCA CATACAAGGACATGACATGCAGAGTGGTCCACGCAGGTCAGCTGTCAGAA AGCTTTGAAGTGCAGACANAAGCTTTGAAGTGCGGACAGGGGTACGGCAG GGATGCTTGCTGTCTCCATTTCTTTTCCTCCTAGTTATTGACTGGATCAT GAGGACAACTACAAAAGGGAAGAGTAATGGGATCCAGTGGACATTATGGA CACAGCTAGATGATCTAGACTTTGCCGATGACCTGGCACTTCTTTCACAC AGCCACAAGCAGATGCAAGAGAAAACAACCCTTCTGGACACAACATCAAT TAGCACAGGGCTCAAAATCAGCAAAAAGAAGACTGAACTCATGAAGAGTA ACACAACCAGCAACATACCAGTCAAAATTGGAGGGGACGAAGTGAGGGAG GCTGAGTCCTTTGTGTACCTGGGAAGCGTCGTAGATCGTCAGGGGGGCAC GGATAGAGATGTGACAGCCAGGATAGGGAAAGCACGAGCAGCCTTCATCA TGCTGAAGAATGTCTGGGCTTCCAGGGTGATACGCATAGCCACAAAACTA CGTATCTTCAACTCTAATGTCAAGTCTGTATTACTTTATGGTTCGGAAAC TTGGAGGATCACAAAAAGAACGCAACACAAGGTACAAACTTTCGTGAACA CTTGCTTAAGAAGGATCTTCAAAATCAGGTGGACAGACAAAATTAGTAAC CAGGAACTGTGGGAAAGAGCAGGTCAAAGCCCAGTGGGAAGTCAGATCCT CAAGAAGAAATGGTCCTGGATAGGGCATACACTTAGAAAGCCTATATCCA GCATCACACACCAGGCCCTGACCTGGAATCCCCAGGGTAAGAGGAAGAGA GGGCGGCCAAAGAACAGCTGGAGGAGGGACACAGAGGAGGAGATGAGGAG CATCAGCAGTAGCTGGCAGGACCTCAGAAGGAAGGCCCAGAGACGAGTAC AATGGAGGACAATCATCGGTGGCCTATGCTCTGATAGGGGCAAAGGGCCT AAGTAA

Coding sequence (CDS) from alignment at Sc0000098:319126..321881-

>Blg01809.0 ID=Blg01809.0|Name=Blg01809.0|organism=Branchiostoma lanceolatum|type=CDS|length=2346bp|location=Sequence derived from alignment at Sc0000098:319126..321881- (Branchiostoma lanceolatum)
ATGCTGACACAGGAAGCGCAGAGGGCACTCATCGGTTGGGAACCAGTCAG
TTCACGCATAATCACTGCCAAGTTTGCTACAAAGAAGAGTAACATCAACC
TGAATGTCATACAGTGCTATGCCCCTACCAATGATGCTGAAGAGGAGAAG
AAGGATGCCTTCTATCAGCAACTTCAAGCGGTGTTAGACAAGAGCAGAAA
CAAAGACAACAAAGACATCACTCTACTAATGGGCGACCTCAATGCCAAGA
TAGGTTCAGATAACACAGGCCATGAGGAGGTAATGGGAATGGAAGGACTA
GGTAAGATGAATGACAATGGGGAAAGGTTTACAGACCTGTGTTCACTCAA
CCAACTTGTGATAGGAGGTAGCATCTTCATGCACAAACGAATCCACAAAG
CCACATGGAGATCGCCAGACCACATAACAGAGAATCAGATAGACCACATG
TGCATCAGCCAGAAGTTCCGACGACTGTGGAGTGATGTAAGGGTGATGAG
AGGGGCAGATGTGTCTTCAGACCACCACCTTCTGGTGACGTCAGCACGAC
TGAGGCTGAAGAAACACTCTACAACCACCAACCCACGTAAAAGATTCAAC
GTAGGCCTGCTCAAGAATAAGGACATACAGACAACATTCAAACTCAGCCT
GTCTAACAGGTTCCAACCACTACAGGAACTGTTTAAGGAGGAGGACACAG
ATATTGAGAACCAGTGGCAACTGGTCAAGAAGGAGTGGCTGGACACATGT
GAGGAGGTCTTGGGCAAGAAGAAACCACAACACAAAGAGTGGATCTCCTT
CAGCACTCTGCAGAAGTTGGAAACAAGGAAGCAAAGGAAAGCTGCATTGA
ACACTAGCAGAACAAGATCAGAGAAGGCAAAGGCACAGGAAGCATACACT
GCTACGGACAAGGAGGTCAAAAAGAGTATTAAAAAGGACAAGAGGGACCA
CTTCGAGGGCTTAGCTAAGCAAGCAGAGGAAGCAGCGGGAAAAGGAAACC
TGAGGGACCTGTACATGACAACAAGGAAGCTAGCTGGCAAATTTCAACAA
GTGGATAAACCAGTTAAGGACAAGGATGGCAACCCCCTCACAACAACAGA
AGAACAACTGAGACGATGGGCAGAGCACTTTAATGAGCTGCTAAATAGAC
CAGCCCCAGAAGCACCTCCAGACATCCCACCTGCAGACTCAGAGCTACCT
ATAAACACTGGAAAACCTACAAAAGCAGAGATCAAGAAGGCCATCATGTC
CCTTAAGAACGGAAAGTCAGCAGGACCAGATGAAGTACCAGCAGAAGCCC
TGAAAGTAGACATAATGAGCTCAGTCAATATGCTGCATAGTCTTTTCAGT
AGGATATGGGATGAGGAACAGGTTCCTGCTGAGTGGAGAGAGGGTTTACT
AGTCAAGCTGCCTAAGATGGGAGATCTCAGCAATTGTAACAACTATAGGG
GGATTATGCTACTATCAACAGCAGTTATTGACTGGATCATGAGGACAACT
ACAAAAGGGAAGAGTAATGGGATCCAGTGGACATTATGGACACAGCTAGA
TGATCTAGACTTTGCCGATGACCTGGCACTTCTTTCACACAGCCACAAGC
AGATGCAAGAGAAAACAACCCTTCTGGACACAACATCAATTAGCACAGGG
CTCAAAATCAGCAAAAAGAAGACTGAACTCATGAAGAGTAACACAACCAG
CAACATACCAGTCAAAATTGGAGGGGACGAAGTGAGGGAGGCTGAGTCCT
TTGTGTACCTGGGAAGCGTCGTAGATCGTCAGGGGGGCACGGATAGAGAT
GTGACAGCCAGGATAGGGAAAGCACGAGCAGCCTTCATCATGCTGAAGAA
TGTCTGGGCTTCCAGGGTGATACGCATAGCCACAAAACTACGTATCTTCA
ACTCTAATGTCAAGTCTGTATTACTTTATGGTTCGGAAACTTGGAGGATC
ACAAAAAGAACGCAACACAAGGTACAAACTTTCGTGAACACTTGCTTAAG
AAGGATCTTCAAAATCAGGTGGACAGACAAAATTAGTAACCAGGAACTGT
GGGAAAGAGCAGGTCAAAGCCCAGTGGGAAGTCAGATCCTCAAGAAGAAA
TGGTCCTGGATAGGGCATACACTTAGAAAGCCTATATCCAGCATCACACA
CCAGGCCCTGACCTGGAATCCCCAGGGTAAGAGGAAGAGAGGGCGGCCAA
AGAACAGCTGGAGGAGGGACACAGAGGAGGAGATGAGGAGCATCAGCAGT
AGCTGGCAGGACCTCAGAAGGAAGGCCCAGAGACGAGTACAATGGAGGAC
AATCATCGGTGGCCTATGCTCTGATAGGGGCAAAGGGCCTAAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01809.0-exon-Sc0000098-1570713199:320408..321881Blg01809.0-exon-Sc0000098-1570713199:320408..321881Branchiostoma lanceolatumexon
Blg01809.0-exon-Sc0000098-1570713199:319126..319997Blg01809.0-exon-Sc0000098-1570713199:319126..319997Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01809.0Blg01809.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000098genomeSc0000098:319126..321881 -
Properties
Property NameValue
GeneIDBlg01809