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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:235859..242574+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01802.5 ID=Blg01802.5|Name=Blg01802.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6716bp|location=Sequence derived from alignment at Sc0000098:235859..242574+ (Branchiostoma lanceolatum)
TCATAATAGTGGGAATCCTTGTGGTCATGAAATATTGATTGACTTTTTTT
ACATACGTTTTAGCGTTGTTCTCAAAAGAATGCAGTCATAAATCTGTAAT
CCAGTTCATATCTGATAAGCACGAGGGCGCTGTTGCACAACCCAACGGAC
AGGTGAGGCAAGTTCCAAGTTACTTCACCTTTGACCTGCCAAGATAGCCG
ATTCTAGAAGAAGGCTTATCATGGCTCAGGACAAGAAACTTCCGTACAAA
GTTGGCAAGTAAACAACAAATGTTATATATTGCACAAATTATGTATGTCA
CTATAATTGATTAGATATTGAGATGTCACGTTCACAATTGGTTATTGAAT
AGCATGCAGGGGCGAGTTACATGAAGCATGTCATGAAATGGATGAATTAT
TCAACATGTTGCAAGATTACGACTTTCATTCGCCTTCATGTTAACTTTTC
AATATCTAGTTCTACTTTATTTTGAGATGATCTTTCAAGTTCACCCATTA
ACTAAATCAAAGGCAAAAATTACAAAATAAAGATCATACCTTAGAGAGGG
GAATCTTAGGAGACTTCCTTTGAGTTGAACTGTTGGCCCAGGGGTGTGTC
TTGGGACATTTGTTACTTTCCTTGTAAATTTGACAGGAGTGATGGCAGAT
GTTTCAANTGAACTGTTGGCCCAGGGGTGTTTCTTGAGACATTTGTTACT
TTCCTTGTAAATTTGACAGGAGTGATGGCAGATGTTTCAACCTTAGCCCC
AAGAACGTATTCCTGACCCTCATAAAACTCTTGCTCTGGATGGTTTCACT
TTGAATAAGCACATTTATATATTCGAGTGCACATATGCAGTGTCATTCAC
TTTGAATAAGCACATTTATAGATTCGAGTGCACATATGCAGTGTCAAAGA
TGAAGGCCCCTGAGACCTAAACAAAACTTGTTGTGCCATTGTTATGCAAA
TCGAGACAATGTCAAACGAGAACTGTTTACAAGCCGGGGGCCTGCATATG
CATCCTCGAATCTTAGCGAATGGGCTTATTGTAAAGTTTGTCTTCACCTT
TGTAGCTGACATCGGACTGGCAGAATTTGGCCGTAAGGAAATCAAACTTG
CCGAGCAGGAGATGCCGGGACTGATGATGATGAGAAAGAAGTACGGACCC
GACAAACCGCTTAAAGGAGCGCGAATCGCGGGCTGTCTTCACATGACCAT
CCAGACAGCAGTCATGATCGAGACACTTACAGAGTTAGGAGCACAGGTGG
GTGTTCAGCTCAACTCCATTGTTAGATACCAGTATTACTGTAGTCAGATG
CCATTGTTGAGTTACAAGAGACATGTATCATTAAAAGACTTGCCCCCTTC
CCAAAAAAACTGTTTCTTACCATTGGGTCCATGTTTCTTACCATTGGGTC
CATGGATGCCACCATATTGACTTGCTTGCTTATAAGTGCAACTTTTTTTA
ATTCAACAGGGTCCTACAGATGACGTCAATTTTATTAGATGCTGCAGGCA
CACATAGCAAAGAATCACTCTTAGAGTCATTAATAATTGTTAATCACTGA
ATTTCTAATTTTTCAGTGACATTTATTTGTGATTGATTAAATCAAATAAG
CTAATCCTCCTTACAGGTCCAGTGGTCGAGCTGTGACATCTTCTCCACAC
AGGACCATGCGGCGGCGGCCATCGCTAAAACGGGGGTTCCCGTGTATGCG
TGGAAGGGCGAGACGGAGGAGGAGCTTGTGTGGTGCATCGAGCAGACGCT
GGTCTTCCCAGACGGACAACCTCTAAACATGATCCTGGACGACGGAGGAG
AGTTGTGCAACCTGATACATCAGAAATACCCACATTACCTCACAGGTAGG
TTGCAAGAAAAATTCAAAACTTTTCTAAAGTATGTTAAAAGATCTAGATA
AGTGTTAACCTTGCAACATGGTTATTTTAATCCTAAAAACCTACAGTATT
GCTCTGAATTGAATAAAAAAAGCATGGACTTAAGTGTCTGTGCAAAATAT
AACCTCAGAAAGTCCGGAATAGCCTGGATGCCATCCTGGTTAGCTCCTAT
TATCATATTTTCCCCTAACTAAATGGTAAACTAACTAGGATAGCACCTAG
GCTATTTTCAGAATACTAAGTATGATGGTAAGCCAAAAATGCATTCTTCA
GTTAGCTCACCCTCTCACCCCATTGTTGTTGTTGCTGTTGTTATTGTTGT
ACAGGTATAAGGGGGATCTCAGAGGAAACTACAACAGGTGTGCATAACCT
CCACAAGTTGACTGCCGCGGGGGAACTCAAGATACCCGCAATTAACATCA
ACGACTCTGTAACCAAGGTAAGCAATAGCATGGAAACACTATGTTGTGTT
AAGATTGGTGTGTTAACATTGATGGTGATATAGTCTTGTTGCGCTATCTA
ATGTTATGTCTTTTGGTGAGTCTCCAAAGACTAGAGGATTTTTGAGAAGT
TGCACAATCATGTTCATGATGTAGATGTCAACAGTTGCTGTTTACCCTTT
TTCAAGCAATGTTTATTTTTAGATGCCTTTTTGTCAAATTTGTCCCTAAC
ATGTGTACAGCTTTGAAGGCTGGACTGATGTAAAGGATGCCAATATGTCT
CAGACATGTTTTCTGGTTTCCAGTACTCTTTGTGGAATAATTGTCATGTT
ACATCCCTTCCTGTAGAGTAAGTTTGATAACCTGTATGGATGTCGTGAGT
CTCTCCTGGACGGCATCAAACGTGCAACAGACGTGATGGTGGCGGGGAAG
GTCGCTGTCGTGGCGGGGTACGGGGACGTGGGGAAGGGGAGCGCGCAGTC
CCTGCGTGGTCTGGGCGCCCGCGTCATCATCACGGAGGCTGATCCAATCA
ACGCTCTACAGGCGGCGATCTCAGGTATTGTATGTACCGCAGGAAGGGTT
AGGGTAAAGATGGTAGAGTATTTAAATGTGATTCTACATTGTTTTGCAAG
TGAAATCATTGGTCATGCAGCATTTATATTTTTCAGACGTAATCTTTTTA
TCATTTTGGGTGGTTATTTTATTTCAAATTTGAGCAATCATTTCGGCCTG
AGTGTCATCCTAGTTTATCAAAGTTCCAGGGCTCCCATATGTAACTCTCC
CTAGTTGGGCAAGGGCAATATGGGAGTCCTGGAACTAACTAGGATGACAC
TCAGGCCACTGTCATTTGTAATGCTACATTCTTTTCGATTCTTGCTTCAT
AGGATACGAGGTAACCACAATGGAAGAGGCCTGTAGGGTGGGGAACATTT
TTGTCACCACGACCGGCAACAAGGACATCATCCGTGGTGAGCACATGTTA
CAGATGAAGGAGGATGCCATCCTGGCCAACATCGGACACTTTGACTGCGA
GGTGGACGTACAGTGGCTGAATAAGAATGCAGAGAAAGTGAACATCAAAC
CTCAGGTATCTGACTCTTACAGACAGATCTTCTTCGATTGTGAGACCCAG
GAGTTTCTTTTGGCAAGTTGTTCTTTTTTCTTCAATAGTCTTTTGGAAAG
TCTAATATACAAGAAATGGGTCGGCAACTGACTCAGAGTTCTGAAAAAAA
TTAGCAAAATTTCTTTAAGTAAAATTGCCGTACAATTTACATTTACATTG
GTCACAATAATGGACGGAAATAGTCAAACTAAAGCAGATTATGATTTTGT
CATAAGATTTGTTATTTGACATGGAAGTGCCATTGTCTCAACTTCACAGC
CAACTAACTACATAAAATACATGCCCCTCTGTGTTTCAGGTTGACCATTA
CACCCTCCATAATTCATCTTGACTGTTGCACCAGCTTCCATATTTCAAGT
TGACTGTTACACCCTCCATATTTCAGATTGACCGCTTCACACCACATATT
TCAGATTGACCACTACACCCTCCACATTTCAGCTTGACCCTTACACCCTC
CGTATTTCAGGTTGACCGCTACACCCTCCCTAATGGCGGCCATGTCCTGC
TGCTGGCGGAGGGTCGGCTGGTGAACCTGGGCTGTGCCATGGGTCATCCC
AGCTTCGTCATGAGCATGTCCTTCACCAACCAGGTCCTGGCACAGATGGA
GCTGTGGAACAGGGCCGACCAGTACAAGGGGGTGCACAGGCTGCCCAAGA
AGGTTGGTATTGGCTCACACACTTTATCCCAATGGTTTTTATTGGTCAGA
AATTACCCGTGCAATGGCAGCCTTTGTAGTACTGAATTGGTGCAGGGTTT
ACTATGACATAATACACATGGGCAACAGATACATATTTGTTCCACACTTG
CATTTTGTTGAACTGTCGCAAGGGTCTAGGCGGCTGCTATTCAGCGCCAC
CAGGTGACCTCAATACAACCTTCCTGGACCGAAGTCAGGTACCCATTCAC
ACGTGGGTGGAGTGAGGAAAGTCATGTTAAGTGCTTTTCCCAAGGGCACA
AGTTCGGTGACATGACAGGATTTGAGTTTGAGTTTGCATGACATGAAAAT
CATCTATATGATTGAATTAAGGTAGACATGTTGATTGGTCATGTGAACAT
AAACAATATCTACGCTTTGGTTCAGACTGTTGTAACCTTATGATGTATTT
TTGATAATCAAACTAATAGGTGTTTAGAAGTTTTAAATGTGAATGATCCT
TTATTTGATTTACACCATTGTTGTTAAGCCTTGCAATTCAGTCTTGTATG
TTACGACTGCAAGAAGGTTGTCTGTCATGTTTTTTATGCAAATAAACCAG
TCTACTGCTAATAAATATAAATCCTGCTCTTTTCAACAGCTGTACATTTT
CCTGCAACAGTGCCCTTTTATTTTCACTGCTGGTCAAAACCCTCTCTACT
TGATACTAATACAGTGACTGTAGTCACCCCACTACTATTTCTCCCCTTAT
ATATTCCCAGCTGGATGAGGAGGTAGCTGAGCTGCACCTGGCGCACCTGG
GAGTGAAACTAACACAGCTGTCTGAGGAGCAGTCCCAGTACCTGGGAGTA
CCTGTAGAAGGACCTTACAAGGCAGAGTTTTATAGATACTAGCTGGTACA
GGGTTGGACATATTATTACTGTGAAAGTCTTTATCTATAAATGACAGATT
TGGAAGAATGAAATTTTAGGGAGGTAGAATTTTTTCTATATTACTCTAGG
CAGAATGGGTACTATGTAACTTTTTACATTCCATGATTTTTTTTAAATAC
GGCTTGTGCAAATTTTATATTCTACTGGTGCAGGTTTTCTCTTCCATTTC
TATACTATGCTGTGATCTGCCTTACATGTCAAAAAGTGCCTTATACACTA
GTTATATCAGTCTTCAAACGATTGTGCTGCATTTCATGTAGGTATTGGTA
CATGACTGAGTCATGATAACAACTGAAAGGGGAAAGTGGGAACTGTGCAT
CAAATCTAAAGGGGGTGAAAGAGTGCTATTTATATACGTCTAGAATCCCT
TATGTTACAATTAATAAAAGCAGACTGATCATAACCATCATACCTCTGCT
TGAGTATATAGAAACTTTGTGAAAGACTTGTTACACAGACCATATGTATG
TATCATAGAGACAAAACGGTATGTGGAGATCAAGTTATTTTAATAAGAAC
ACTCTGTGACTGTAACTTAATACATTTTAGGTCTTTGAGACCATGTTTCC
AAGAAAGCTCATTAACAGTCAGAAATGCAATACTGTAATCACATCACACT
CACAGCAAATTGATTGTCTATGCTATCGTCAAGTGAAAGCCGCTACTTCG
ATAATTGCTTTACAAATAGCTCTATATATCTCTAGTGGCAGACAGGTTTC
ACTTCTATCATACAGCTGAAAAGTGAAAGTTAACCAGGCTTGGAGATGTC
ACAAACCTTTTTAGTTACATGCCTTCCTTCTCTGAAATCCCAAATATTGA
TTCATTACAATTTGTACTTGTTATCTGTTTTTGAATCTTGTAGTGAATAT
TCCGCCTTATAACAGATCCAACATGGCATGTTTTGTAACAGACGATCAAC
ATTACACTTTGGTCTGTTAACATATCATACTTTCATGTGTTTGCTTCTTT
TCAAGTTAATCTTTATTATATAAATGAACTTTGCTTAGCTGCCTTCTACT
TTTGCCCTTCTACATGTATTCCAGGACAACTTTGGGGTGATATTGACCTA
TTCTATCAATTTTTGTGTCCATGCTTAACTTTCACAGAGGGTAATGTAGT
AGTAGTAGTTACTGTAGTAGTCAATACATTCATAGTGGCTACATTTCTTA
TGTCTGTGACACANTCTTATATCTGTGACACACATGAAGACACAGTCTAT
ATCCTAACAAAATGCACTCTCCTGATAGAGGTCAGAAGCAGCATGATCCT
TTTTTTACACACATACAAAAAGTAGCAAAATATCTACATTTTCTCACAGC
ACATTTCTGTCCATGTATTTCAGTTTTTCCTTTTCAAAAGTTAATTTACT
TTCAGGTCTGAATTTTTACACAGAACATCTAAAAACCTCACAACCTCCCT
TTTGATCAATCAAATATCTTTTAATAATGTTAATAAATCGGTCAAAACAC
AAAGAAGACCTTACATCATTGATGCATCGACTTTTCTACCTCCAAGGATA
AAGTTTACTCTCTTAGCCTTTCAGAAATAAAATATCTGTATTTCATCATG
TACATATACATGTATGCAATAAAAATATGGGAAAGATTATCATCTCTTAA
GTACAACTTCCCTTTTGACAGTTTCCTTTGGTATCAAGACATACATGTAC
ACATTTTGATTTTTTC Coding sequence (CDS) from alignment at Sc0000098:235859..242574+ >Blg01802.5 ID=Blg01802.5|Name=Blg01802.5|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000098:235859..242574+ (Branchiostoma lanceolatum)
ATGGCTCAGGACAAGAAACTTCCGTACAAAGTTGCTGACATCGGACTGGC
AGAATTTGGCCGTAAGGAAATCAAACTTGCCGAGCAGGAGATGCCGGGAC
TGATGATGATGAGAAAGAAGTACGGACCCGACAAACCGCTTAAAGGAGCG
CGAATCGCGGGCTGTCTTCACATGACCATCCAGACAGCAGTCATGATCGA
GACACTTACAGAGTTAGGAGCACAGGTCCAGTGGTCGAGCTGTGACATCT
TCTCCACACAGGACCATGCGGCGGCGGCCATCGCTAAAACGGGGGTTCCC
GTGTATGCGTGGAAGGGCGAGACGGAGGAGGAGCTTGTGTGGTGCATCGA
GCAGACGCTGGTCTTCCCAGACGGACAACCTCTAAACATGATCCTGGACG
ACGGAGGAGAGTTGTGCAACCTGATACATCAGAAATACCCACATTACCTC
ACAGGTATAAGGGGGATCTCAGAGGAAACTACAACAGGTGTGCATAACCT
CCACAAGTTGACTGCCGCGGGGGAACTCAAGATACCCGCAATTAACATCA
ACGACTCTGTAACCAAGAGTAAGTTTGATAACCTGTATGGATGTCGTGAG
TCTCTCCTGGACGGCATCAAACGTGCAACAGACGTGATGGTGGCGGGGAA
GGTCGCTGTCGTGGCGGGGTACGGGGACGTGGGGAAGGGGAGCGCGCAGT
CCCTGCGTGGTCTGGGCGCCCGCGTCATCATCACGGAGGCTGATCCAATC
AACGCTCTACAGGCGGCGATCTCAGGTATTGATACGAGGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01802.5-exon-Sc0000098-1570713199:235859..236112 | Blg01802.5-exon-Sc0000098-1570713199:235859..236112 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:236914..237104 | Blg01802.5-exon-Sc0000098-1570713199:236914..237104 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:237475..237703 | Blg01802.5-exon-Sc0000098-1570713199:237475..237703 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:238063..238175 | Blg01802.5-exon-Sc0000098-1570713199:238063..238175 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:238525..238737 | Blg01802.5-exon-Sc0000098-1570713199:238525..238737 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:239061..239263 | Blg01802.5-exon-Sc0000098-1570713199:239061..239263 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:239769..239960 | Blg01802.5-exon-Sc0000098-1570713199:239769..239960 | Branchiostoma lanceolatum | exon |
| Blg01802.5-exon-Sc0000098-1570713199:240719..242574 | Blg01802.5-exon-Sc0000098-1570713199:240719..242574 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:235859..242574 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01802 |
|
