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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:1037264..1043949+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01801.0 ID=Blg01801.0|Name=Blg01801.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6686bp|location=Sequence derived from alignment at Sc0000098:1037264..1043949+ (Branchiostoma lanceolatum)
ATGCTGGGCTTCAGCGTTGGTGCCATCACATCAGGAACCCTTTCGGACAG
GTAGGGCTGTGGTCTTGTAGTTTATATCTTCATGACAAGTTGATGGTATA
TTGTACACTAGCCTGTGTTTACACCATGTCTCGCTAGCGGAGGTTAATGA
CCCACCTTCTAGAGGGCGGTATCCGTCGGGCCGGCCGCCAGGAGCGATAG
TTAGTCAGGACACACATGTAACTTAGGCAATGTTTGTGTGTCTGTTGGTC
CACAAGATAACTCAAGAGCGGCTGGATGGATTGGTTTCATTTTTGTGTGT
TTGTAGGTTGTGCAAAACCTTGAAAGTATAGATTTTGGGCCCCCTTGACG
CTTTTACTCGGTACTGCAGTTTGATATCTCATATTCTGGAAAGCTATGGT
TGCGATCGTTAGGTGGGGGATAGCTCTTGTGCTCGGCAAAAATGTGACCT
ACTTTTGGGCCGCCAAGCTTTAAATTGCAGGGGCGTTTTTGTTAAAATCT
TGCAAGGATGGTAACTGAAGAAAGAAACAACGGATTATCATGATTCGGGG
TATGTAGGAAGCTTAGACAGAGATATACACAATTAGATGCAAGTCATTTG
CATAACAGTTGAATGGAGGTATACGGTCGCCGAACTACATGTATATCTAG
TTATCCATTCAGTGATAACGTTGTTTTAGGTACAGTTTGCAAATCAATAG
ACGAAGACGTGTATGAATGCTATACTTAATTTTCCTAATGACTATGAAAG
TTCATATTCCCATAAACCAACGGACCATGAACATCCATCCGATGGGAACC
AAGAATGTGTATCATATAATAACAAACTATGTATATAAAACTTCAAAAAA
CTATAAATGTAAAACTTCCACATTCAAGAAACACAATAACCTAAACGTTC
ATACGGAGACCTATGGATGACAATACGATCAACTTACATTACTTACTAAT
AGGTACGGCAGGCGCCCGACCCTTCTATGGTGCATCTCACTCTTGCTTGC
GTTCAGTGTGACGTCAGCTTTCTCGCCCAACTACATCGTCTTCGTCATCC
TGAAGTTTCTACTCGGAGCAGTCAACGTGTCCATCTACTACACAGCCTTT
GTACTAGGTAGGTCTTTCTGCGATATACATGTCAAGAAATTGGACATGGA
AGAACAAGCTTAAGGCACATTTTAGAATATTACAGGAAATCTTACATTGA
ATAAAACTGTACCCGGGGGATTAATCGTTTTAGGTTGCTTCGTCAGTACA
GTTATGCAACCTAGTTTCTTAGGTCCGGTTAGTGTTATAGAACTTGTTGC
TTTGTAAGATTTGCTGTAAGATTCCTAAATTAATGTGCCTTGCTTCATGA
TGTTGAATATTTAGCCACTGATTTGCTTCTCAAGAAAGTGTTTAGAATAG
ATCTTCATTTCGCGTCAGTTTCTTAATTCTGCCCTCCTGTATGTACGTAT
TGACACGGACAAAAACGTCATTTTCAAGTTTCTCAGTGAACAAAGCAGCA
TCTACTGACTTTGTTTAGAAGAGAAGTTCAATCGTCTTTTTGCATATCTA
CATCATTGAGAGTTATATCTATAGTCTGAGAATATTTTGTAAGAGGCCAA
TAATCCTTGACATTGCAGTTATTTCATGAAATCATCTCTCAGTTTTGATA
TATCTACCCCCACTGGCACTGCATTTTAAGCTTTTAAGCAACTGTACGTT
ATGTTTGTTTCCATGCGCAGGTATGGAGGTTTTGGACCACTCCAAGCACA
CGATGTTCGGAATGTTCATGTACCTGTTTGTGGTCCTGGGGTTTTTAGGA
CTGGGCGCCTTGGCTTACATCATCAGGGACTGGTGGAAACTACAGCTGGC
GATTTCAGCTCCTTTCCTACTCTGTCTGAGTTACTGGTGGTAAGTTACGG
AAGCAGTATAAACATCTATAACAAAGCATTGCAAAAGGTACGTGGGGATG
GGACACTTGCAAGTATTGCATTTAAGACTTAGTCAAACCAAAGAATACTA
AACGTAGATTGTTATGGCAGACTAGACACTCACCACAGAATTCTTTCTGT
TCACTTGCAGTTAGCAGTCTGCCATGAATTTCCAAGACAACTACAAAGAA
ACAGATTATGCAATGCCAGAGAAATGGGAATGGTTATGAAGAATTGTACA
TATAAGTCGCATGTCGCAAGGGCATGATATTTTAACTCGCAGAGGACGGT
CTATGTAATTTACTTGTGGTAAATTTGATTCTTATACCTATTCTCCAAGC
AGAGGTTTCGATGGGGGGCTAGTAGTGGCCGGGATTTTTAACGCTGCTCT
AGGCCTCACTTTAGCGTTAAAAATCCAGGCCACTACTAGCTCCCCGATTG
AAATTTAACCTCTGCTTGGATAATATCTTATGCCGACTTTGCCGTCAGGT
TGTTGCCGGAGTCTCCGCGGTGGTTGATTGTTACCGGACGGACGGAAGAC
GCCAAGAGAGTCATCAAACGCGCCGCGAGAATGAACGGAGCTGACTTCCC
GGACAAACTGTACCGCGAAATGGACTCCAACCTTATCCGGGTGAGCATGA
ACACACTCATAGAAGTTACAGAGAGAACCTTTACCCTAGATATAAAACAG
TATCCCCTTTCATCATGGCAAAGATTATATTAGGCCATGTCGATTTGATT
TTATGGATGACATTCGCGCGCGCATCAATTTTCGTCCGTTTCCAAAGAAA
ACAAAAGTTCTTACCATACTAGCACTGTAAATCGTGCTAAGCAGCTACAA
AATGAGCAAATGTATGCTGTAACTTACAAAATGATAATTTAAACAAGATT
GGCAACATAAAAAGATGTTGCCATGGCGACGGTGGTCTCTGTTAATGTTT
TTGTTTTTAGCACGCATGCAAATAAGGACCTCGCATAAATCATATCAGTC
GATCACCTTCTCTACCAAAATAACATAAGTTGTCCAATGTACGAAAATCT
TGTTTTCACGAAAAAAATATATCGTACCATTTCCTCATAAATTATGGAAA
TGAGACCCTCTATGCAAGATTTGTGTGTAATAGTGGCCACATTTACTTAA
CTTCCAAATGGTGCAAAAATGAAATCCCCATCATTTACCACTATGGATTT
ATAGTATTGTGTCATAAATTATGCAAATTAAGTATCAATTTGCATAATTG
ATATCTATCAATATTTATCTCTTTCTCAGTTACATATGTCATGTGTTTGA
GAGTCCTATAATAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGTCATTGTGCGTGCGGCGGACGGTAGTTTCAA
GTTGAAATATTATGGTGTCAGCACGACTAGAGACAAAATCTACCATATAT
ATGATTAGTGCAAAGATAGTACATGATACTGACAGAATAATAGAAAAAAA
GGATGGTTTATTGTTCTGCTAGATTGATTTCAGTCAACCATTATCGGAAA
AATCCCGAATTTAGGTTACCCAACGTTATATGATTATATCATCACTGTAG
GAGTCCGAGTTAAAGTCATTGGCAAGTTTCCATGATGATAATCAGCATCA
TCTCAGCCTAAGACCTGTTGGGGGGGGGGGGTTACTGTCAACTCCAGGCT
AATGCTCAGTGTGTCACTGCTTAGATCACGCAATGAATGTATTTCAATTC
TGAACAGCACAATGGAGACGACGACAAGGAAAGAAGACAGCACAACGTGN
GACAGCACAGCGTGCTGGATCTGGTGCGCACGCCCAACATCAGGAAAATT
ACGCTTATAGTTGGGTTCACGTGGTGAGTGTCAAGGTCCGCGTTCTTTGA
AAACGGCATGTTTCCCTATGGCTATGGTACTCTCCAAGCAGCGGTTGATG
AAGGAGAAGAGTGTGACCTTCTTGGTCGGGCCTGCGGACGGAAAACGGGG
TATCTAATAAGAAAGTTACAACCTCCCGCACCAACATCTGCTTAGAAAGT
ATGACTATTGTACATTTCTTTGTTATGCTTAATATCATCAGTTTCTTCAA
AAACCATGTTTCTGTCCATCCCGCTTCAGACTATTAAAATATTGTTTATA
AACCAAAGCAAACCAAACATATTTACGTCGATGTTGCCCCAATAACTCAA
CAAGGGGTTGTAAAGTTTAACATATTTTGGCAAAAGTATGAGGTCGTGGA
ACTGTAGTTCTTATTCTTTTGAATGAAAATGTGATCTTTACTGACATCTT
GGAGTCGCAAATGAATCTGTAGCCTGAATGTAGTAGGTTCCATGTTTTTC
CAGGTTTGTTATGATAGCTGTATACCTTGGCCTTTCACTCGGCGCACCAG
AGCTCCCTGGCGACCCGTACGTGAACTTCATCGTCGGTTCCTGTATGGAG
ATCGTGGCTGTTGTGGTGGCCTGGTCCACTATGGACAGATGGGGGAGGAA
GCCTCCTGCTATAGCGGCCTTACTTGTCACAGGAATAAGCTGTGGAGCAA
CAGCTGCCGTGCCAAAAGGTACTGAGAGTCTAGGCCAATGTTTCTTCAAA
TAATTGCCAAGCATTATCCAAACCAAGAAGCAATAGCAAGAGATAAATAA
ACAAAGAAAGACCCCATTTATGAAAATACCATGCAGAACAGAAACAGCTA
ACAAGTTACACTTTTAAACAGATTAGCGTCTTACATTCTGAATGGCTAAA
TAGCCTTGGTTTTGTGTGTATGATGATGAGGGTGCTGAATGGAATTAAAG
TACGACATAATTTGTCATCCTCATGTTGTCTTCCTTAGATCTATGGCAAG
TGTCCACCTGTTTGACCATGGTGGGCAAACTTGGCGTTAGTGTTGCGTAC
GCGGTTTTCCCGGTGTACTCAGCAGAAGTCTTCCCAACAGTTGTCAGGTT
GGAGCACATTCCTACCGAAGACTTGATAGGGCTTTATAAATAACTTTAGA
CGGTGTAGCTAGAAATGTCTAGCCTGGGTGCCATCCTAGATTACTATGTA
CCGGGGCTCCTGCGTTCCACTGACTTAGGGTGGCGAACGCAGGAGCCCCG
GTAGTAATCTAGGATGGAGCCAGGCTAAAAAATACTCACGTACTCGATGA
TTTCCATTAGTTGCATTCGGAGATTAGAATATCTCGCAAACAAATTGATG
AGAATTACGTGTTTTACTTGGAGTACTATACTCCATCGAATAGTCCTCGA
ACAATTTTGCAAAGTATAACGTTGCCCAGCTTGGAGCTTGAGAAAAGAGT
ATTTGCTTTACCTTTAAGAAAGGTACATTGCAGACCTTTTTCCTTTCTAG
AAATATGGGAATCGGGATGGTCGCTATGATAGGCCGAGCTGGCGGGATCC
TCGCCCCGTTTGTGGCTCTGTTGGAGGGGTACTGGGCCCCCCTCCCCCTC
CTCACCTTCGGCATCCTGAGCTTCCTGGACGGAGTCGCCATCTTGGCTCT
GCCGGAGACACTGGGCGTCCCGCTACCTAACACACTGGAGGATGCTGAGA
ACTTGATCGGGTATTTCTCAGTCCTATTACTTCTTCTTTTACCATGACAT
TTAACGTTTAACGTTACAACGTACTGTTTAGTCAGCAGTACTAGTTTATT
TTCTTCTCCAAAGATTGATTCCTATATACTTTCTTTGGCATTTGTTGGTG
TTGGAATTAATGAATCGCCTAAACACGTGTATTTGAGCATAGACAAAGGT
CAAATAGGTGTTAACTCTACAGTCAGTATCTGTCCTTGGTACTGAACATG
CCATATTATGTACTGTTGGGATGCTAAAAGGCAATGCTACGATAGTTGCA
CTGTAACGTTATTTTTAAAGATATTAGAAGAATCTCTCCTTGGTGCTGAA
TATGCCATTTGATCCACGTTCAGACGCTACGAAGCAAAAACAACCACCGC
TAAGATTTCAAGGTTTACCGTGTACAATCATCATCTCTCCTTGGTGCTGA
ACATGCCATTTGTATGCATTGTTAGGATTCTAAAAAGCAATGATAAAGTA
TTTGTACCTCAGATCTCATCATAAAATTAACTCTTTTTCAGCTCTTATCA
GTATGTTGATGGTTTTCTAATGATGGTACTCTTTGCTATGTACAGCGTGA
GAGAGAAGAATTCAGAGAGCTCTGAAAAGATCCTGCCTGACAAATTCCAG
AAGACTGAGATCTATGATAGGATCACAGTTTTGTGA Coding sequence (CDS) from alignment at Sc0000098:1037264..1043949+ >Blg01801.0 ID=Blg01801.0|Name=Blg01801.0|organism=Branchiostoma lanceolatum|type=CDS|length=1257bp|location=Sequence derived from alignment at Sc0000098:1037264..1043949+ (Branchiostoma lanceolatum)
ATGCTGGGCTTCAGCGTTGGTGCCATCACATCAGGAACCCTTTCGGACAG
GTACGGCAGGCGCCCGACCCTTCTATGGTGCATCTCACTCTTGCTTGCGT
TCAGTGTGACGTCAGCTTTCTCGCCCAACTACATCGTCTTCGTCATCCTG
AAGTTTCTACTCGGAGCAGTCAACGTGTCCATCTACTACACAGCCTTTGT
ACTAGGTATGGAGGTTTTGGACCACTCCAAGCACACGATGTTCGGAATGT
TCATGTACCTGTTTGTGGTCCTGGGGTTTTTAGGACTGGGCGCCTTGGCT
TACATCATCAGGGACTGGTGGAAACTACAGCTGGCGATTTCAGCTCCTTT
CCTACTCTGTCTGAGTTACTGGTGGTTGTTGCCGGAGTCTCCGCGGTGGT
TGATTGTTACCGGACGGACGGAAGACGCCAAGAGAGTCATCAAACGCGCC
GCGAGAATGAACGGAGCTGACTTCCCGGACAAACTGTACCGCGAAATGGA
CTCCAACCTTATCCGGCACAATGGAGACGACGACAAGGAAAGAAGACAGC
ACAACGTGNGACAGCACAGCGTGCTGGATCTGGTGCGCACGCCCAACATC
AGGAAAATTACGCTTATAGTTGGGTTCACGTGGTTTGTTATGATAGCTGT
ATACCTTGGCCTTTCACTCGGCGCACCAGAGCTCCCTGGCGACCCGTACG
TGAACTTCATCGTCGGTTCCTGTATGGAGATCGTGGCTGTTGTGGTGGCC
TGGTCCACTATGGACAGATGGGGGAGGAAGCCTCCTGCTATAGCGGCCTT
ACTTGTCACAGGAATAAGCTGTGGAGCAACAGCTGCCGTGCCAAAAGATC
TATGGCAAGTGTCCACCTGTTTGACCATGGTGGGCAAACTTGGCGTTAGT
GTTGCGTACGCGGTTTTCCCGGTGTACTCAGCAGAAGTCTTCCCAACAGT
TGTCAGAAATATGGGAATCGGGATGGTCGCTATGATAGGCCGAGCTGGCG
GGATCCTCGCCCCGTTTGTGGCTCTGTTGGAGGGGTACTGGGCCCCCCTC
CCCCTCCTCACCTTCGGCATCCTGAGCTTCCTGGACGGAGTCGCCATCTT
GGCTCTGCCGGAGACACTGGGCGTCCCGCTACCTAACACACTGGAGGATG
CTGAGAACTTGATCGGCGTGAGAGAGAAGAATTCAGAGAGCTCTGAAAAG
ATCCTGCCTGACAAATTCCAGAAGACTGAGATCTATGATAGGATCACAGT
TTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01801.0-exon-Sc0000098-1570713199:1037264..1037313 | Blg01801.0-exon-Sc0000098-1570713199:1037264..1037313 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1038216..1038370 | Blg01801.0-exon-Sc0000098-1570713199:1038216..1038370 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1038984..1039152 | Blg01801.0-exon-Sc0000098-1570713199:1038984..1039152 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1039662..1039803 | Blg01801.0-exon-Sc0000098-1570713199:1039662..1039803 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1041471..1041586 | Blg01801.0-exon-Sc0000098-1570713199:1041471..1041586 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1042067..1042281 | Blg01801.0-exon-Sc0000098-1570713199:1042067..1042281 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1042552..1042660 | Blg01801.0-exon-Sc0000098-1570713199:1042552..1042660 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1043064..1043273 | Blg01801.0-exon-Sc0000098-1570713199:1043064..1043273 | Branchiostoma lanceolatum | exon |
| Blg01801.0-exon-Sc0000098-1570713199:1043859..1043949 | Blg01801.0-exon-Sc0000098-1570713199:1043859..1043949 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:1037264..1043949 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01801 |
|
