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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:501445..508287- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01788.1 ID=Blg01788.1|Name=Blg01788.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6843bp|location=Sequence derived from alignment at Sc0000098:501445..508287- (Branchiostoma lanceolatum)
GCCCAAAACCTGCAGCGCTTCGTCTGTGAGTGTCACCTTGCGACTTGCTA
TGAAACTGCAGAACTGAATCAGCTGAACGGGCCGGGCGGTTGCCGTGAAA
CGAAGACGCCAAACACGACCACCTTTCACCCTTTTGCAGGTTTCTTTGGA
GCTACATCTTCATGGCAGTCAACATGATCCTTTAGCTGCTGTTGGAAGTG
CTCAGTATTCAGCCACGAACTATGAGTGGGGCTCAGTTTTCGATGTCGGG
CGAGGAGTATTTGGGTAAGCCTTCGTTCAGAATGTATGCGCCCCCCTCCC
CCATTGATACCTGTGTATAGTACAAGATGCATTCATTCCTTGACAATTCA
ATTCAATTCAGCAACAAATTACGAGACAAATTAATGTCCGGAGTAGTAGA
CTTGCGGGTGCCTTCGTATTTGAATCTCTGAATTTTGTACTTGTGACCTA
TACTGCATTGATATAACCTATTTAACCTCCTTGATTGTAGCCGTGGCGAC
TGACGAAGGGAGTTTTTTATTGATATTACATATACTATATCAAGAAAAAA
CTCCCTTCCTTAGTCGCCACGGCTACCTTGATTGTAATATTACAGTTAAG
CAAAATAACTCGAGATCAGCACCAGATAAAGGTTCAGGGCCATGAGCAGG
TGATGGCAGAATAAATTTAAGTCTACGGGAAACTCAAGTATTTAACTTTA
AATATTGTAAGATCATGTTTTTTTCTCCTACAGCCCGCCATCATGTGATT
ACGTACCTAGAAGACGCCGTCAGTCAGCTGTTGGAACACAGGGAGGAGAA
TCCCCGAGTCAACCCGGCCAAGTTCTTGAGCGACTAGTCAGTATTTCCAT
TGGTGTAGCAACCAATTGCTTAGCAGAAGTAGAAGCATAAAGGGACGCTT
TCTTCTGTAATAATATGTAGCATTTTTCTCTCAATGTTTTGTGTGTCACT
TATCAATGTTTCATTTTTTTAGAATTTTGAGTCACTTTTCTTCTTTTCAA
AAATTATGTTCATGTAAAAGGCTCTGTTATTTTTAGCAATTAAGTTCATG
ACAGTTTTATAGAATACTCACAGAATGAACATCATATAAAGTTGAAAACC
TATTTTTATAATTACTCTTTGGCACATACACCACGGATGTATAACGTATA
AATGATATCAGATGTCTCTCATTTGCAATCAATTGTTTAAGATACAATTT
GGAAATGAAGAGATGTTTCAAACAACATTTGCTGTCTGCAACAAAATACG
GGATGCTATCTGAACCATCTGACCGTATCCAAATTTATCCAGTAGCTTGA
CTAACTGGATAAGATTTTGGACAAGCAACGAGTAACTGGGTAAAATTTGG
AAACGATTAGATGTTTTAGACAGCATCCGTTTTCAGTTACGAAAAACAGC
ACATGCTATCGAACAAGCCTGACCGTTTCCAGATCTTATCCAGTTGCTTG
AGCACTGTAATTCACTTTTAATATCTTCACGCTAGCAAAACGTCACGGTG
TAAACAAAACAAACATTTTCACTGAACTTAAACTTCACGGTGGCAGCATG
TGATTTACAGAACGGATGTGTGAAGGTGTCATAAATAATAACAACAGGTT
TTTTTCACGGTGATGATAAGTTTACGGTACAGAGGTGACCATGAAAACAG
TGCGAACATAAAGTTACAGTGATTAAAACAAGAACTACAGCAACTGTTAT
CTTCCATATGTTAATCTTATTACCTGCATCTGGATGTCTAACCTTCATCG
ACATAACCATATTTCTCCTTCGTTAGTTTCACCAGCGTTCACCGCGGGAA
CCACACCCTGTTCCGTGAGTACGAGTACATCAAGGCCACGCCTCACAACA
GGACCGCCTTCATACGCATCTTCTGGAAGTGCTTCCGACAGGTCGGAAAA
AGTGGAGGTCAGAAAACGGTCCAAATTTTATTATTACATCTCAATTGATG
GAACAAAGTTGCAAGACAAGAAATGATTTACTAGTACATCATTAAACCTT
AATCAAAATGTGACCAAGTAAGATTTTGGGTATGTATTGTATTAGTAACT
GTTTATATCTAGATTTAAAGCTGTATACCTAATATAGGTGGAAGAAATTA
GAGCTGTTCCAATACAAAGTATTTAGAAGTACATTATAAGTATATCTTTG
GATATTATGGGCAGTATAGACCGAACATGTTGACTTACTTTCATTCATAT
GATTGGCAGTTCAGATTTGAGGCAAATACAGCTTTGTCAAACCTGCATAA
CATTCTAAATCTGGTGACTAAACAACTGCTGGATGTGCAACTGTTTTGGG
CCCATTTTGATTGTTATTTCCCTGGCCTGTTTCCAGACCTGCTGAATGCG
AAGGAGTACCAGTCCTTACTGTGTCTGCTGTGTCCTGACTTTCCTCTGGA
GGTGGTGCAGAAAACAGCCAGGTAAAAAACCACCCCTGCTGGTAAAGTGG
TACAGTCCTATCATCCATGGCACCTCCTAACAAATAGATTTTGACATAGC
TTCCTTTGCTGCAGTTGAGTTTTTGATCTCATTGCAATATGAAAGTGAGA
CAAACGTTCACTTTGACTCTTGAAATCTAGTACAGAAGCCTGAACTTGTC
ATTACATGATTGTGTACTTTTAACCTTCTTTCTGCAAAGGTAGCCTTTGG
GCACCAAAAGGCTGTACACTTTTGTGACTACATTAGGTCGGGCAGTAGGG
AGAAGGTTAACACATGTTAGCTACTAGTATTGCCATGGAGAAGACTACAA
TGACTGTGTGTAGGATGAAAACATTTGTGTGTAAATATATCGGTAAGCAC
AAAGTTTAGCATTTGTGTCCAGCATAAACACCTCACATAGTGTACTTGAG
TGACAATCTGATGTTGCATACATATATATGTATATGTACATTTTTTACCC
TTTATATTTGTACAGAATAGTTCTGATGGACGATGCCATGGATTGCCTCA
TGTCCTTCACTGATTTCCTGTTTGCCTTCCAACTACAGTTCTACTATGAC
GGTCAGTAAAAATAACTTTTGCACCTCTGCAATAAACCCTCTCCTTACTT
GTCTTAGAGGGCATACTCACTAACAAAGGATAAATTTGTCAATTATTAAT
TTAATCATTAATGTGCAATACTGTTTCCCTGCATAGTATCCTGAAAATCA
TATGAATGTAATTCGTTTTTTAATGTTCTGTGTACTGTACTAGTATGTAT
GTACATGCGTCTATGGGAAATATATGAATAATCATGCTTTTTGCAGGAGA
AGCATACATGGCTGAAAAATGTGGAGTTTGTGTTCAATATGCTCCATGAA
TACAATAATCAATATGTAATTTCATCAGGTTGGTTAATGACTGTATAACA
AAGTTCTTTATTTACAACCAAGGAGTTGCTGATGTTTCGGTGACCGTCTG
TCACCTTTTTCAGGGCAATACTGACTGGTTCTTAAAGAAGTAGCTCATAG
TTGTTTAGTTTCTTACTGTTGTTGCTTGACAATATCCATATATGCACATG
CATATGTGACTATGCTTTATGTTTGGGACTGCCTTCTCAACACTGCAACA
GCTAGCTGCAGTGTGAAGTAGAACCATTCAGTCATGCACCGAAACATTGT
AACTTTTTGGTTGTTAATAAAGAACTTTGTTATACTGTTCGAAAGTTTTA
TATTCAAATTCCATGTCTTGTATCAACTCATGACCAAGGCTAGCCACTGT
CTATTTGCGCAGCCCTGGCTGTACTTTTTTCACAGTTGAACAAAGTAGAT
AGATAGAATACTTTGCGTGCATTTTCAGAGTTCCTATACACGTCGTCTGA
GATCTACACCAACATCATGTCAGCCACCCGTGGTAGCCGAGACGCCGTCG
TGGTTCCCACGGTTTCCCGCGCCAAAGGGAAGACCCCGCAGCTGTCGGAC
GGACCAGACAGTGTAGAGTCTGCGCAGTTCTCTGAAGCAGTGAAGATGCT
GTGTGAAACATTCCAGTTCAGGTGGGGACAGGGTTTTTATGTTTCTCCAT
GGCGTCAGTGGCCTAACGGTTAGGCAATCATCTATATGGGCTTTTTTATC
TGATAATGTTTATATCAAAGAAGGAAACAAAGTTGTTTATTCCATCTTTA
TTTTTCCAGCCACCCCCCGGTGGACATTCTTCACGGGATCCTGATATCGG
CCCCCAGAGTATCGTTCTACGGCTTCCTTATGGCGCTGGCAAAACACGAG
GGCATCAACTCAGCAGTTGGTAAGGTTTTCTACTTGTCAGCCATAATGGC
CTTTATCCATCTTTAGTTACTGTCAGTTTCATAATTTCTTCGTAGATCCC
CTTTGTTCTGTATCAACAAAAGCTTTTTTCTCCTCCCTTCCAATGTACAG
ACTACTGAGAGTTTTGTCATCTTTTTTATTCTTACAGGAATTTTGCCACC
CAAAGGACAGATTCTGGATGACACAGACCCAGACATACAGATGTAAGTAT
CGCCCTTGCAGAAACAAAAGTTTTTGTTTGCTATGAAATTTAGTGATGAA
TAGGAGGAATGACAGATAGGAATAGTCCAACCATGGAGGTTCTAATCATT
GAATCAACATAGTGAAATCTTGTAAAACCTTTCATGAACAAGACTACTGT
CAGTGGTAATAAACAATTGTTACACAATACAAAAGTTACTCAAGCAGTTG
AATAAATTTTGTAACAAAACTCGTCCAGTTGCTTGAGTAACATTTGTAAT
GTGTATCTCATTACCTGGATGTCTAACTTTCATCGACGAATGAACAGTTG
AGTTTATGTAACGGTTTGGTTTAATCTCAGTTCCAGTGCCAGAACCCCCC
GACCCGTGTCTGCTGTACCCAAGCCTGCCAGCTGAGGAAACCTAACCTGT
CTACCCCTAGTTTGGAATAGTAGCTTCCAACATGTTTCCAATTGTGGGCT
TTGCCATGGAAAGTGTGTTTATATGGAAATATGATACTCAGTTGTGTTAC
TGGACTTCAGGGATGAACAGATCATTATAGGTGGTCTATAACAAACCTGT
TTTGTACACCACGGTAAATAAAAAACTTCTCTGCTTCATCCAGAAAGATG
GGGCAAAACTCACATTTCAATCCATAAAGGTACATGTATATTCTGAAGCC
TTAAGATTAAATGACTGTCAAATGCACAACTGTTAGTATTATATACGAAG
CATCTATATATTATAGTGTTCAGACTTGTTGTCCTGTGCTGTTTATAATT
GCATGTATGAAATATTTCTACCTACTGTAAGTTAAAAAGACATGATGACT
ACCATAAATTATTGTATCACAGTAGGAAATATTGAATGTTTAAGATTTAC
AATGTCGGTTGTACACTGTAAATAGCAATGGCTCTTAGTAAGCCCTTCCA
AATAACTGTAAATGCATTAAAGTTCAGATAGTTTTAATCTGGCGATAGGG
TCTAGTAAAAAATGGAGTGTCCGCGGTGGTTTTAAGTTTCTGTTTGAGAC
AATAGTAGACAAGGGGGTAGGAGGGTAAAAAATGTTCGCTGTGGTTTTAA
GTACGCGGTGGATCCGAAGATCTTACAGCGATAACTGCAAACATAAAACC
ACTGCCAACATTTCTGCATTTACAGTAACCAGACAGAAAGTAAAAGAAAT
GTAACCAGATAAGGCAATAAGAGTTATCCTTGATGGCTGGCATTATAAGA
AATATCTTAAATGTTCCCTATAACTTTGATGCTGTCTCTCTGTTATATAT
ATGGACCACTTCACCAGATTTCCAACCACACACTTCAAACAAATGCTAGA
CTGAAGTTTGTTTAAGGCAACACATAAAAGATGCCAATCTGTAATGGCAT
ACAGCTGATACATTTTGTGAGTCTTCCAATTAGGCAGCCACCATATACAG
TTTAAGGTTCAGAACTTCTCTCCCCATTCCCCACTCCACCTCACCCATAT
GACTAAAGCAGCCCTTAGGTACTCTTCCAACCAATCCAGACGCACACTGT
CCAGGCAGCTAAAATCCAGAGAAGCTTGACTGATGCACAGCACAGAAGTG
TGGCATTGTGTGGTGCAATCAGTAGACAGTCGCTCCAGACCCTTGCGATT
CAGCTCCACCAATTGTGTGCTCCTGTCTGCAAAGATTGAGTATTCGGCCT
ACCCAATAATAAAAAAAAATTAAAAGTGAATCTTCAGAAAAGAGCTTTGC
AACAGAAATGGGTTAGCTTACAGATAGATGTGATGTATGTGGCAGAGACT
GTCAACCTCATATTGGACTATTTAGCCATAAAAGATGCTGTAGGGCAGAT
CTGTCAAAGGCCGCATATACAACTGGGCACTCTTCCCATCAACCATACAC
AGCCACAAACACACTGGCAAAGCAGCCATTTTGTGCACAGCTTCTTTTAT
TCAAATGAATACATACAGCTTGCCACACACTGAGTTTACATCTCTGTTCT
CAGAACACAACCAAACAGACAAGCTAGTAACATAGCCTTGAACACAGGTC
ATCTGAAAACAGATCTAACATTTTTTTACACTTTGTTTCTTTATTCTTTA
TGCATCTGTGTCTTTATCTTTTAATGCTAAAAAAAGTAAAAAAAAAGCTG
GTGGTACTTAATAATTTGTATACCCAAATCACATCAAAATCAATTTGTTT
TCAAACAACACTCAACATCAGGCCTTTTAAGTTGAAGCATTTTCCAGTAT
ACTGTCTAATTTAACCTTTGACCAACTGAGTTTTTTTTATTGATTAGGAA
CAATCATGAGGTGTTATCCTCTACTCAATATGATAATTTATACATAATAA
GAACAATGTAGTCCTTCTATCACCAAAGGATTAAGGGAAATGCATCGAGC
AAAATTCATCAATGCATAAGCCACAAAGATGAGTACACAGCAT Coding sequence (CDS) from alignment at Sc0000098:501445..508287- >Blg01788.1 ID=Blg01788.1|Name=Blg01788.1|organism=Branchiostoma lanceolatum|type=CDS|length=861bp|location=Sequence derived from alignment at Sc0000098:501445..508287- (Branchiostoma lanceolatum)
ATGAGTGGGGCTCAGTTTTCGATGTCGGGCGAGGAGTATTTGGCCCGCCA
TCATGTGATTACGTACCTAGAAGACGCCGTCAGTCAGCTGTTGGAACACA
GGGAGGAGAATCCCCGAGTCAACCCGGCCAAGTTCTTGAGCGACTATTTC
ACCAGCGTTCACCGCGGGAACCACACCCTGTTCCGTGAGTACGAGTACAT
CAAGGCCACGCCTCACAACAGGACCGCCTTCATACGCATCTTCTGGAAGT
GCTTCCGACAGGTCGGAAAAAGTGGAGACCTGCTGAATGCGAAGGAGTAC
CAGTCCTTACTGTGTCTGCTGTGTCCTGACTTTCCTCTGGAGGTGGTGCA
GAAAACAGCCAGAATAGTTCTGATGGACGATGCCATGGATTGCCTCATGT
CCTTCACTGATTTCCTGTTTGCCTTCCAACTACAGTTCTACTATGACGAG
TTCCTATACACGTCGTCTGAGATCTACACCAACATCATGTCAGCCACCCG
TGGTAGCCGAGACGCCGTCGTGGTTCCCACGGTTTCCCGCGCCAAAGGGA
AGACCCCGCAGCTGTCGGACGGACCAGACAGTGTAGAGTCTGCGCAGTTC
TCTGAAGCAGTGAAGATGCTGTGTGAAACATTCCAGTTCAGCCACCCCCC
GGTGGACATTCTTCACGGGATCCTGATATCGGCCCCCAGAGTATCGTTCT
ACGGCTTCCTTATGGCGCTGGCAAAACACGAGGGCATCAACTCAGCAGTT
GGAATTTTGCCACCCAAAGGACAGATTCTGGATGACACAGACCCAGACAT
ACAGATTTCCAGTGCCAGAACCCCCCGACCCGTGTCTGCTGTACCCAAGC
CTGCCAGCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01788.1-exon-Sc0000098-1570713199:508024..508287 | Blg01788.1-exon-Sc0000098-1570713199:508024..508287 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:507452..507554 | Blg01788.1-exon-Sc0000098-1570713199:507452..507554 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:506381..506511 | Blg01788.1-exon-Sc0000098-1570713199:506381..506511 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:505867..505951 | Blg01788.1-exon-Sc0000098-1570713199:505867..505951 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:505287..505372 | Blg01788.1-exon-Sc0000098-1570713199:505287..505372 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:504317..504509 | Blg01788.1-exon-Sc0000098-1570713199:504317..504509 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:504069..504178 | Blg01788.1-exon-Sc0000098-1570713199:504069..504178 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:503846..503900 | Blg01788.1-exon-Sc0000098-1570713199:503846..503900 | Branchiostoma lanceolatum | exon |
| Blg01788.1-exon-Sc0000098-1570713199:501445..503507 | Blg01788.1-exon-Sc0000098-1570713199:501445..503507 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:501445..508287 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01788 |
|
