Blg01775.2 (mRNA) - B. lanceolatum

Overview
NameBlg01775.2
Unique NameBlg01775.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000098:200866..207033+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01775.2 ID=Blg01775.2|Name=Blg01775.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6168bp|location=Sequence derived from alignment at Sc0000098:200866..207033+ (Branchiostoma lanceolatum)
TAGTACTACAAAAATTCACAACACCGATTAATGCAGAGAATATTCTAAGC GTTTAAAAAATTTTAGCGGTTGAATTTTTTTTGTCTTGTGACAAGCGATA TGAGCGATCAGGTTCATCGATGCCGCAGTAAAACCGATCCTACCGGCGAT AGACTCACCTTGGTCGGAACAAATCTCCCCGGAACGTCAGAAAGAAACCC CCTTGTAACGATCAATCACTTCAAAGGCTGGTGTTTGTTGGATTTTCTCG GTAAAATCCGCCCATAAATGACGACAATCTCCTCAAAATGTTACAAATTT TCGAGGGGCGAAAATGGCGACGGCGGTTCACACCCGGAAAACATGGCGGT ACTGCCGCTTGGAGAAAATAACTCCAGGATTATTCTCCTCACATTTTTCT TTGCGTTCCTCACGTTTACCAGTATGAATATTGAACCTAAGAATCTTTTT TAAGAATGCCAAAAAAATGAATTTCTTTGTCTCTATATTCATAAAGTGTT TCATTTTTTGTGTATTAGCGTATTGATATGTGTTGAGTTGGTGCTGTATG ATTATGGTCACGTGACCTGCCCGACTAGTTGCACCAGAAGCAGGGACAGG GAAGTCTGAAAAATTCCAGCCAACTTTTTCTGGATTATTTAGCGAATTTG AAGCAAAAACAACATGGGATGTGACGGAGGAACAATCCCAAAGAGGGATG AACTCGTCAGGATGAAGAAAAAGCCAGAACAGGTTTGTTTTAAACGGTTT ATATGGCGTCTATAGACTCTATACTTTCAAACGTCTCAGAAAGGGAAGTT GCCCCCCTCCCCACCAAGTGTCGCAGAAGAGTAGAGTAGAGTAGAGTTTC TTCGGCCAGGTAGGAAACGGCTGGTTCCATTTTAGGCCGCTCTTCACTTT TATGTCACAGTCATTTCCAGTTTGTGGGGGTTGTCTAGAGCTCGGAAGTC AAAGTACACCTTGTGTTTCCGCATGAGCCTGTCCAGCCTCTCCTTGAAAC AGTTTATGCTGGGAGAAACCACTACTGTCTCGGGTAGGCTATTCCACCAG GGGATCACCCGGACGCTGAAGAAGTGTGCTCTTCTGTTGGATTTAGATGT TTTCCTCTTTATACGTAAACTGTGTCCTCTAGTTCTAGTTTCCTCGATCA AGTCAAAAGAAAATTATGTTCTGGATACACATCATATAACTAAGGAAAAC AGCGACACATCATACATTCGTAGTGTCTGTTGGTTTCTAGGATTAACTTT GTTACATGTAATATCAAGAATGTTTCCTGTTGGATGACCTGACAAAATTT CTTGATAAAATTTGTTGTCAAACATCTTAGTACAAAAGTCTTGCGGCCAT ATAATAGTGGTAATACACTCACAAAAAAAAGCTCAGTGTCATTCATTCTC TCTTAAGTCAGCATTCCCATAATTCTTTTTGTCTGCCTTCAAGAAACGTG AAGAAGAGTTATGTCTAAATTATGGGCTGTCTACTTGTTTTTAAAAATTA TACATCGCAGTCATCAGTCATTGAATTTTGACCCTTCAGTATGTCCTTCT ATAAGACTTTTTATGGACTTACGACAATGACTTACAACCTTTGAGGTAAG GTGCGACGAGGTCGTAAGGGCCACAAAAGTGCCTGTCGTGCGATGCGCTG GGCCAATTCACACCCTAGAAAAAAAGGCCCCATACACCGAAGACGTACAA CTTTGTCGTACATCGCTGTCGTATGTCCAGAAAAATTTTCCGAGTGTGGA ATCAGGTCTAATTCTGTATCTGGCACCGTCCTGTATATGGCTAATTTCAA AGTAGACTGGCATGTATTCCATTTCCAAATCGTTCTGCTGCACTGCTAAT ATCCAATCCCTTCCTTTGCATCACAGAAAGACAAGAATGCAGACATGGTG GCTAAATGGCAGCACTGTGCACTCAGCCAGGAGCCGCTGCGACCGCCCAT CATGGCCTGCGAGATGGGGCATCTCTACAACAAGGAGGCACTCTTGGAAG CCCTGCTGGACAAGTCAGGAAACCCCAACATTCAGCACATCCGTGGGCTG AAGGACGTGAAAGAGCTGCAGCTGACAGAGAACCCAGCCCGGAAGGACAG CAAGCCAGACAGTGGTATGTATGACTTCTACATGAAAGCCTAAATCATGT AGGGAATGGTGGTCCTCTATAGTTCGAGATGCTGCGGTGTGTGTGTGAGG ACAATGTTTAGCAGATGACGGCAAAGATGACTTTCACAACATGACACAGA GTAAATGGAAACACGACTTCACGCTCTGGATCCCAAAACTCAATTTTCCT TTATTTCAAAAGTCTAATTGCATTCTGCGAAAGGATGGCTATCTATCATT GACTATCTATCATCGTCGACTATCATCNCGAGGTCGTAAGGGCCACAAAA GTGCCTGTCGTGCGATGCGCTGGGCCAATTCACACCCTAGAAAAAAAGGC CCCATACACCGAAGACGTACAACTTTGTCGTACATCGCTGTCGTATGTCC AGAAAAATTTTCCGAGTGTGGAATCAGGTCTAATTCTGTATCTGGCACCG TCCTGTATATGGCTAATTTCAAAGTAGACTGGCATGTATTCCATTTCCAA ATCGTTCTGCTGCACTGCTAATATCCAATCCCTTCCTTTGCATCACAGAA AGACAAGAATGCAGACATGGTGGCTAAATGGCAGCACTGTGCACTCAGCC AGGAGCCGCTGCGACCGCCCATCATGGCCTGCGAGATGGGGCATCTCTAC AACAAGGAGGCACTCTTGGAAGCCCTGCTGGACAAGTCAGGAAACCCCAA CATTCAGCACATCCGTGGGCTGAAGGACGTGAAAGAGCTGCAGCTGACAG AGAACCCAGCCCGGAAGGACAGCAAGCCAGACAGTGGTATGTATGACTTC TACATGAAAGCCTAAATCATGTAGGGAATGGTGGTCCTCTATAGTTCGAG ATGCTGCGGTGTGTGTGTGAGGACAATGTTTAGCAGATGACGGCAAAGAT GACTTTCACAACATGACACAGAGTAAATGGAAACACGACTTCACGCTCTG GATCCCAAAACTTAATTTTCCTTTGTTTCAAAAGTCTAATTGCATTCTGC GAAAGGATGGCTATCTATCATTGACTATCTATCATCGTCGACTATCATCT AAGAAGTGAGGTTCCAACAATACATTCTAAGGCTTATACCTACTGGTTAT TCTTTACAAAATATGATAAATCATAATACTAGTAACGTTACCCATTTCTA ACAGGTTAAAGATACACGAAGTGCAAGTGTTCACAAAGCAGCAGTGAGAC TTGTCTGTAGTTAAGCTAAAAGGATGTCTCAGAGTCATTCCAGTCTTAAA GTTGTCAACGTCAAGACATTTGTTTCAACAAAAAAGATAAAGGGAGACAT GTGAAAATGCAAGAGACTATGGTATAACATCTGCTGTCTTACACCTTGAC CTTTATCTTCTATTCTTTCAGGTGATGCATATGCAGACCATCAGGCAGCA AAGTACATCTGTCCAGTGGTGGGTCTGGAGATGAGTGGACGTTACCAGTT CTGTTTCCTGTGGGGCTGTGGCTGCGCGTTCTCTGAACGAGCACTGAAGG AGGTCCAGACCAAGACATGTCATAAATGTGGGGCTGCCTTCAGGTAGGTG TCAACATGTTTCCACAGGGGGTCATTTCAACATGTTCCCACAGGGCCGGG GGTCATTTCAAGTAGTAATTTTATGTGTTTCCATAAGAAATTCCTAGCTA CTTAAATATGGTGCACATGTAGGAGCTATCTGTGTACATCAATGTTAGCT GTTTTTTGTTCTGATGTATTGTCACGGCAAAAACGGTATAGCTGAAAGAC TGGAAAGGGAATTACATGTATGAAAGTCAAGTAGATAAAAATGATGCAAT AAAGCGTCATGTTTCTTCTTTTTTTCAGGTGTCCCTACAGTTATGTCTTT TATGTTTATATATGTTCACATCTTCGCACCTGTTTCTTTGTATGCTGTAC TGTTCCATGTACTCCTTTCCTGTAATGAATTTATCTATTTTTTCCCTTCT CAGTCAGGAGGACGTGGTGACCTTGAACCCAGCTGAAGACGACCTTCCTC AGGCAAAAGAACGCATGGAGCAGCGTAGGCTGAAGGCCAAGGCTGAGAAG AAATCCAAAAAACAGAAGAGAAGTGTGGCAGAGACTCTGTCCAAGGCCCC AGCTGAGGCCTCCTCCAGCAGTGGTAGTTCCTCACCAGACGAACCACCGT CCGGCAAACTGACCAACGGAGCATCGCCCAGTTCCACAGACGGACCTCCC CCCAGTAAACTGACCAAACTGACCAATGGTGCTTCGTCTTCCCGAGTGGA CAAATCCAGAGGAGGCTCCAAGCCAAACGGTGCACACAAAGGGAAGGCGT CGAGTATTTACCACGATCCTAACAGGAGTGAGGTGTTCAAGTCCCTGTTC ACATCCCATCATAATGCTAAGGAGAGGGTGGTACACTGTGCCAGTTGGGT CAANAGAGGGTGGTACACTGTGCCAGCTGGGTCAACAAGAGTATCTAGGA TATGGGTGGCTTAAAGAAACTTTTCAAATCCTCTTCAAAAGTTCCAACTG CATGTTGGAAAACAAGCAGAGGAAATTGTGTATAGCTGGGATTGTATAAT AGACATAGAAATAGGGGCAAGTGAGGAGTAATAGGTGTCTTGTGTACCAT ACTTGCTCCAACTAATGCACAATTTTATTGCAATATCATATTGCAATATA TCAAAAGGTATATCTTTCTTAGAATTCAGCTTACATGACAATACCCATTG ATTCTTCTCATTTATTCAATTTTGAATCTACAGTAATAGAGCAAATGTAC TGATGATACTGCAGCTGTATTGTAATCACTTAGATTTGTCAAAAATACAT GGGAAACTTACAAGTTTAAGTGTTAATCAGTAGTAAAACACAAGCTGTTC GCCAATTGTAGGAACTATTTTCAAATCTCCTTTGTCTGATCTTGGCATGC ATTCAACAAAATGTTATACATGTAGTAAGAAGATGGCTGTGAGGAAAGTC ATGCACTATTACTGAAAACATTTCAGTTTCAAGTTGCAAAACATCGCCTT ATGTGGCCAACTAAAAGTGTACTGTATTTTTACACAACATTTTCTGCAGA TAGTAGTCGGTGCAATATTTTTGTAGGGTACAAGCCTCTTCATCAGTTTC TGATCTGTAAATTAATCCAACTTCTACAACAAAATAAGTCTTGTATGTAT AATGTATATATGCTCATGTATGTACTTTCTCTTCTGTATGTGTAGTACAA TAAAAATCTGTACATGTGTCTACTGTTGGTTTTCAACTCTCTTTATCTGT TTAAATAACACATTGGTGGCACTCTTCGAGCTCTACAGGCACTTAAAATG TATTTTCTTCCATGGACCAAATTAAATGTTACAGTGTCAGGTTTTCAAAT ACTAGTACTAAATGTAACTCAACACAGCTCTGCCCCCCAGTATCTGAATC CAGTAAACATGCAGAGAAAGCTGCATTCTAATGTAAGATGATGAATGTAA ACCAGTAGTGTAAATTCATGAGACACTTGACAGGCATTCTATATTTACGT TGGCATAAACATGTAACGGTGTACAATATGAAAGTACCCAGAGCTTTACT GAATTCCAGTCTAACAAAATATTGGAAATACAAAAGAGTTGTCAGCGTTA ACGGTATGGTAGCCTTAAACCTATTTGATAAAATCTACATGTAAGATCTA AGACCTGACTAACAAACAAGCCCACTTCAGGAAGAAGTACATCACCTCTT CCAAAGGGCAGTGCACCTACCAGTGTGCTGCCAACCAAGTTGTCCTGAAC ATCAGAAGGACATTCTGTTAGGGATCACACTGATAGGTACACAGAAAAGG GGGCAGCCACTTGGTATCCCTGACAACTGGATGTCAGTTACCATGGCAAC CTCAGACATAACAGAGAACAGGTCTTCCACCTTGTATGTTTAATGATGAA AGAGTTGTTTTCTGCCCTGTCACAGGTTGTCTGTGTGACTGCCCCTGTGG GCTTTTTTCCAAGAGCTTACCCAGCTTTCGTTTCACATCAACCACAGCTG TGACAAGGCTGGGTAAACCCATGAGAAGAAGCCAGCAGGGGCAGCCAAGT AGGGGAATTACAATGCAG

Coding sequence (CDS) from alignment at Sc0000098:200866..207033+

>Blg01775.2 ID=Blg01775.2|Name=Blg01775.2|organism=Branchiostoma lanceolatum|type=CDS|length=957bp|location=Sequence derived from alignment at Sc0000098:200866..207033+ (Branchiostoma lanceolatum)
ATGGGATGTGACGGAGGAACAATCCCAAAGAGGGATGAACTCGTCAGGAT
GAAGAAAAAGCCAGAACAGAAAGACAAGAATGCAGACATGGTGGCTAAAT
GGCAGCACTGTGCACTCAGCCAGGAGCCGCTGCGACCGCCCATCATGGCC
TGCGAGATGGGGCATCTCTACAACAAGGAGGCACTCTTGGAAGCCCTGCT
GGACAAGTCAGGAAACCCCAACATTCAGCACATCCGTGGGCTGAAGGACG
TGAAAGAGCTGCAGCTGACAGAGAACCCAGCCCGGAAGGACAGCAAGCCA
GACAGTGGTGATGCATATGCAGACCATCAGGCAGCAAAGTACATCTGTCC
AGTGGTGGGTCTGGAGATGAGTGGACGTTACCAGTTCTGTTTCCTGTGGG
GCTGTGGCTGCGCGTTCTCTGAACGAGCACTGAAGGAGGTCCAGACCAAG
ACATGTCATAAATGTGGGGCTGCCTTCAGTCAGGAGGACGTGGTGACCTT
GAACCCAGCTGAAGACGACCTTCCTCAGGCAAAAGAACGCATGGAGCAGC
GTAGGCTGAAGGCCAAGGCTGAGAAGAAATCCAAAAAACAGAAGAGAAGT
GTGGCAGAGACTCTGTCCAAGGCCCCAGCTGAGGCCTCCTCCAGCAGTGG
TAGTTCCTCACCAGACGAACCACCGTCCGGCAAACTGACCAACGGAGCAT
CGCCCAGTTCCACAGACGGACCTCCCCCCAGTAAACTGACCAAACTGACC
AATGGTGCTTCGTCTTCCCGAGTGGACAAATCCAGAGGAGGCTCCAAGCC
AAACGGTGCACACAAAGGGAAGGCGTCGAGTATTTACCACGATCCTAACA
GGAGTGAGGTGTTCAAGTCCCTGTTCACATCCCATCATAATGCTAAGGAG
AGGGTGGTACACTGTGCCACTGGGTCAACAAGAGTATCTAGGATATGGGT
GGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01775.2Blg01775.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01775.2-exon-Sc0000098-1570713199:200866..201597Blg01775.2-exon-Sc0000098-1570713199:200866..201597Branchiostoma lanceolatumexon
Blg01775.2-exon-Sc0000098-1570713199:202742..202979Blg01775.2-exon-Sc0000098-1570713199:202742..202979Branchiostoma lanceolatumexon
Blg01775.2-exon-Sc0000098-1570713199:204337..204508Blg01775.2-exon-Sc0000098-1570713199:204337..204508Branchiostoma lanceolatumexon
Blg01775.2-exon-Sc0000098-1570713199:204919..205358Blg01775.2-exon-Sc0000098-1570713199:204919..205358Branchiostoma lanceolatumexon
Blg01775.2-exon-Sc0000098-1570713199:205392..207033Blg01775.2-exon-Sc0000098-1570713199:205392..207033Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000098genomeSc0000098:200866..207033 +
Properties
Property NameValue
GeneIDBlg01775