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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:407124..414959- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01745.3 ID=Blg01745.3|Name=Blg01745.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7836bp|location=Sequence derived from alignment at Sc0000098:407124..414959- (Branchiostoma lanceolatum)
ATCACCTACCTGATATGTGCACATTTTCTACTTTGAAGAAGAGGTAATCG
TCCGAGAGACTCATGAAAATCGGCAAATTTTCACCACATCCGCACACGTT
CGGAGACGTTTGCTGTTTACAAACCACCCGCCACGTGACGTCATGAGTCT
CGTTCGTACTCTCGCGAGACGCCGAGGGCACGTCTACAGAGTCTACAGCA
CACGCGCGCTCACGCGCGCTCTCTTGCAGTCTGGATGTAAACTGCAGCTG
CAACAGGTGTAACGCTACTGTATTTGTTAGGAGATTGATCACATCGTGAA
CAGCACACGATGATTTGTTCATATTCACAGTGATTGTTTCGTCAGATTGT
GGTCCTCGTTAAGTATGACTCTCATCCCTAAAAAGTTTGGGAAGCTGTTG
TTTACAGCCTCACTAGCGACATCTAGCAATCCTGACCTGTATTGCAGGGA
CAGCTGCTATGGTTACATTGTAAACACCCGCGAGGCGATCACACAACAAC
TGCGGGTACAGGCAGACCTAATTAAATCCCGCTTTCCACACATCGACTAT
TGTTGAAAGGTAAGTTGTAAATTCCCTCTCTGTAGCCAGTTGAAATTGCG
ATAAGACGACAAAGTAAAACAAACTTCTGTTCCGTGATAAGTGAGAGATT
TGCAACAGGTGTTCATGATGCTTTTTGTTGCGTGTTTGGTTTGCGTGATG
AATGAAAGGAGTTTGGGGAGGGGGGCAATATTTCTTTCAGTACTCAAGTC
ATCCGGATCCTTACTCCAACCTTAAACGGATTTACGACGATGCATTGGTG
GTAATGACTTCAAGATCATGGTTAACTGGTGATAGGTGCGAGAAAGAAAC
TTAATGACTTCATTTCAAGTGGCAACCTAAATTTCGAGAGGCAAAACTAT
TGGAGCGTAAAAATTTCCTGGCGAAGTGGACACTTGAAAACAGTTGGGCT
TCCGAACTCCATCTAGCCTCATACCTTTGAATAACGTTGTCATTCTTTAG
CATATCATGTTTTAATTTTCCTTTTTTTTTTGTACCTCTTAAAATGTTCC
AATACTAAAAACCAGGTCGACTTGAAATTTATGAATGAGCCCAATGCTGT
TGTGTTGTGTGTACATGTGTAGCAACCATGGAACTTGATCTTCTTTGTTT
ACAAATCAGTGTGAGGTTGATTGTCATGTCTAGAAGTCCGCCCCTTTTCA
GGTTTACTAAATGCTGGACCAATAATTAACCTCCCTCTAAGTCTAACCAT
ATGATGGCATATTAACTTTTGAGTCTGCTTTGTGCAAAAGTTATAAGTCA
TCATGTGCTTTTCTTTTACTTGGCACAATTGAAGAGTATCAACAATTCTG
AATCGTTAAGCTTCCAATATTCATTCTGTGTTTTATAGCAAGTCTACCAA
TGAAAGATAATTAAATAGAAAGACAGAAGCAATGTGATTGGCAAAGTTAT
CCATGTTTAGTCATGCACTTAGAAATCATCTTAAAAATCACTGACACCAA
ATGTACCAGATTGTGACAAATGTATGAATCCTGACTTTCAGACAGCCATG
GCACCCAGGAGCTCAGCTAAACCTCGCCACAAGTCAGCGATCCTGCCGGG
TACAGCCGACACTGATGTGACGTTACCGGCCGGGATCATGTGTATCTGTG
AGCTGTGTGACTGTGGGCGACACAAGCACCACAAGGTAGGGTACTGGATA
TTGGAGATTCTTTTTACACAACCAATAAATCTCACCTGCTGACGTTTCGG
TGTCTGTCAGACACCTTCTTCAGAGCTTCTGACAGGAGTACTGCTTCTCG
CCGCTATAAGTAGTTAGCCAAAGTAGGTGGCGCTTTTGCGAGAACACAAA
ACATTTAAGCAAAAGCGCCAACTTCAACTTCGGCTACTTATCGCGGCAAG
AAGCAGTACTCCAGTCAGAAGCTCTGAAGACAGACATCGAAACGTCAGCA
GGTGAGATTTACTGGATGTGTAAAAAGAATCTCCAATATCCTATGTTCTA
CCAACCAGATGAAATTATTTTCAGAAGGTAAGGTACTTTTCTGCCAATGG
ATACTTTGGGTACTTTATTTCCTCTATTAACTATCATACAAGTAACAAGT
AAGTAGCTAATCTTCCTGGAGTACAGAAACAACATACAACTGACAAAGTA
CATGAAAATTGTTACAGCTATAAAAACTTTAACTTCTATGCATCAACCAA
TGGTGGCCAATTAGCTTCAAAATTCCAGGGAGAAGCGTCTTACTGAGAAT
AATGACTGTGTGATTAAAGATGTTTTTAATTTTCCCTGTTGCCTAACCCC
ATAACCAATATAGAATTGGTAGTCAAACAGCTACTTCAATGTGCTAAAGG
TTAAGACTTATTCTTTTCTGCTTCCAGGGATGCAAGAAAGTCCGAGGCAC
AGGCATACAGGGAAAGATGGGTGAATGCACGCTCACCCACTACCAGGAGA
CTTTCAAACATCACAGGGTTCGGCCGCGCATGTCGAGACGTCCCCCGCCC
ACCGCACGCGACCCCCGACCTGCGCGTATGGACTTCATGACGGTCCAGAA
GAACGACTACCAGCTGCCGGGGGTCACAGGTCGCGTCGGACTCATCAAAC
AGGAGGACAACTACGAATTACCCAACATGCCTGTGGAGGGGATGACAGAA
TACAGGTAGGGTACAAGTTTGTCAAGTGGTGGCTTTTATGCTCATTCCAA
AGTTGATACCAGAATGACAACTTTGTACTGAACTTACCACAACATCAAGT
CTTTGTAAAGAAGCATTTACAACTCTCTTCTAGTTGCTGTTGTCAAAGAT
TAACAGAAATCACCTTCAAGTTGATGTGATTAGATCTTGAATATGGTTTA
ATCAATTACATGTATAAGTACATTGTACTAGTATCAGATGCAATAATTCC
TTTAGGTGGCAAGGTCTGGGTCTTGTGGTTAGGCCAGGTCGTTGACTTAG
AATCTTAAGGTTCTGGGTTGTAATCCCTAGCATGCCCCAATGTTGTGCCT
TTGGGAAATACGACACTTTTGGAAAAAGTAGGGGTCCTTCCTGGGGTGAG
TGGATCAAACCTATCAGTCTGGTCAAACTTACACAGCTTGTATTTACTGT
ACAAAACTGATGCGTAACTATGCCCAAAGGCAGTTTACCTGTTATGCAGA
ACAAACAAACAAATGATTTGGTGTCTTAAGTGTCTGATTTCTTGAAACCT
CACAGGAAGGAGTTCTTGGAGAAGTCGTCATCTCCCGCACACCTGACGCG
TCCCGTCACGACCCACCAGCCCGCCAGACACAAGCTGGACTCCCGCACGG
CCAACCGCGACTTCTACAAACCCTGGGTGCCGCAGCCTCGCTTCCAGTTT
GGTGAACTTCCGACTTTCACAGGTAAACATGGCTTTTCGTCAACTGTGTT
GTTTACTGCTTGTAGGGTGATCTCCATCAGCCTCACAATTATGCTCAAAT
TGGAAACATAGAAGAACCAAAACAAATTTGAGAGTATTATGTCATAATTA
CATGACTAGTAATTAATTGATTCTTTTCGGGCCAGGCTGGAGGCCTGCCA
ACCTTAGCCAGGGACCTCTTTCCCCCCTTGCAGAATTACTCCATACAATT
CCAATTCAAATCTACTTGGCAACTTCCAGGTATACACAAATGAGAGTAAA
TACTCTATTCACACTCAGTCCCTGTACATGATTAGTAATGTCAAAAGGTT
TTGGCAGCTTGATTTTGATTTTCAGAGGAAACAAAATAATAATTGTAATT
TTTTTCAATATGAAGTACAGCTTAATCCAATGTTTGTAACCTAATTGCAG
GCTCCATCCTGTACCCGAACCCTTCCGACTCCAAGAAGCACCTGAGGTCC
GTCACCATGGCTGACTTCCCTGAGAAGCTGGCTGGTAAGACGGAGCTGGT
CAAGTCTAAACCAGACAACATCTTACTGGAGGGGAGCCACGACCTGGAGA
CCACCAACATGAAGACGTACCGGGGTCACAGGGACGCCGCGCCGGCCAGT
CGCGCCCCGGCACGTGACCAGGAGATGGTTATTCCCAGGAGAGGTGAGAA
AAAATACCTTCTGGTGTATGTATTGGGGTGGTGCTGATCTCTGATTCTAC
AGCCCTAGGGCCACACAGTCCAATACCTATAGCTCCACCCAGTCCCTTGA
TAGGCCACTGCAGTGGGGGGGCTAGTCCACTCAGGTAGTGGTGAGAAAAT
ATGAAGGAAAAGAAACAAAAATTTGATGGCTTTAGTAAAATAGACTAATA
CCATGATATGTCAAACTTGTAGATTCAGCTGAATTCATCAATTTGATTTA
GATTAGGTAAAATTCAGATACATGATATTGAATACTGTGCCATGGAACAT
ACTTTAGAGATGAACTTGTACATGTAGTTGGGAACAAATGGATGCAACAA
CGGTATAAAGTTGACAGCATTTCACAGATAATATCATCTTTCTATCCACA
GGTGACAAAAACATGCAGACCAAATATCAGTTTGACTTCAAAGGCAGGAG
GCAGGCCCGGACCAAGATGTGCACCCCGGCTCCAGAGACCATCAGGCTGA
CCATGCAGTCACGCATGCGCAACTTCGAGACGGAGCAGATGGGGTCATTC
CCGGGTTACGACGCCCGCGTGCACCCGCGACCCGACCTTATAAGGAAGGA
ACAGGTGAGTGGTCTCCCCACTGTTTCACTGTGTTCCTTGGTTTCCAGTT
TGCAGATAAGTTGTAGATCTTGCTATGGGGGGTCAATTGCAGTCAAACCT
GTACAAGTGACCACCTCTACATAAGAACCACCTGATTACTGTGAGCACTT
TTTCATGGTCCCTCAGATTAGCACAAACATGAGCATTAAGAATCCTGTCT
ATAGTGACCAGCTGTCCACAATAGGCCAGACTTAACTGGTTCCCTGAGTG
GTCTTCTTGGGCCGGTTTAACTGTATTGTCATACTGACTTGTTATAGGTA
ACTATGCATTTAAAGGTATTTCCTAGCTCATGGGTAGCAATTTGTTATTT
CCACATCATAGGGTTATCTACAAAATTACCGTTTTGTTACTTTTCCGGGT
GAAGCATCGGTACAAAACTATGAAAAGTTTAACTAAGTTACCACAGATTA
CAGTCACCGTGGCAGCATTCATGCTGTTTGTTTGACACACTGGAAATTAT
ATCAATCTTTACATGTGTCAATTTTCTACCAGGAATACCAGACGGACCCG
AACCTGCCGTTTGAAGGGACGACCATCACGATGCAGGACTTCCGTACTCA
GGACCTCCACGGCGCGTACAACGCCCCAGCCGTCCAACCGCAGCCCAGCC
TGAAGCCCACCAATGCCAAGCTCGACGGCACCACCATGAACAACCAGTTC
TTCCAAGACTGGGGCACCTCGCCGCGCGTTCGCTTCGGAGACTTCCACGA
GGGCCGCTACATCCCGCCCCTGAGAAAATTCGAAGGATACTCCACGACGA
AACACGAGTTTGTTCCGCTGAAGGCGGAGAAAGTGACCAACTACAAACCG
GAGAACAAGCCAGTCGCTTCACTCGGCGAGCAGGATCTGACCACGATATA
CAAGCAGGACTTCCTCCCCGTGGAGAAGCCCATGTGCCGCGCTGAGGAGT
ACCTCCTCAAGAAACAACTCAAGAGCATGAAGAAGAAGGCAGCACAAGCA
GCTGCTTAGATCTTTGGCTTGATTTGAATAATCTTTTTAATGTTGTTTTT
TAGATAAGACCAGATGTCTATGGTCGGCACATGAAATTTTGTTGTATAAA
GGCCACCAATCAAATTTGTTGTAAAGGCATAAAGATTGAAAATGAAAAAA
ATCTTATATCCAAGAGAAAGTTGATAAANACATCATAGGGTTATCTACAA
AATTACCGTTTTGTTACTTTTCCGGGTGAAGCATCGGTACAAAACTATGA
AAAGTTTAACTAAGTTACCACAGATTACAGTCACCGTGGCAGCATTCATG
CTGTTTGTTTGACACACTGGAAATTATATCAATCTTTACATGTGTCAATT
TTCTACCAGGAATACCAGACGGACCCGAACCTGCCGTTTGAAGGGACGAC
CATCACGATGCAGGACTTCCGTACTCAGGACCTCCACGGCGCGTACAACG
CCCCAGCCGTCCAACCGCAGCCCAGCCTGAAGCCCACCAATGCCAAGCTC
GACGGCACCACCATGAACAACCAGTTCTTCCAAGACTGGGGCACCTCGCC
GCGCGTTCGCTTCGGAGACTTCCACGAGGGCCGCTACATCCCGCCCCTGA
GAAAATTCGAAGGATACTCCACGACGAAACACGAGTTTGTTCCGCTGAAG
GCGGAGAAAGTGACCAACTACAAACCGGAGAACAAGCCAGTCGCTTCGCT
CGGCGAGCAGGATCTGACCACGATATACAAGCAGGACTTCCTCCCCGTGG
AGAAGCCCATGTGCCGCGCTGAGGAGTACCTCCTCAAGAAACAACTCAAG
AGCATGAAGAAGAAGGCAGCACAAGCAGCTGCTTAGATCTTTGGCTTGAT
TTGAATAATCTTTTTAATGTTGTTTTTTAGATAAGACCAGATGTCTATGG
TCGGCACATGAAATTTTGTTGTAAAAAGGCCACCAATCAAATTTGTTGTA
AAGGCATAAAGATTGAAAATGAAAAAAATCTTATATCCAAGAGAAAGTTG
ATAAAAATATATGTACATGTAGCATTGAAAGTCAAAGTTGACTTCTGCAT
ATAAATAGATTGGAATAAAGCAAACAACACAAAGAACAACTTTTTAATAT
TTTATTGAAGGGAAATAAGAAATGGTAATATGAAAAATTGAAGTAAATAG
TTTTATGTGCACCCTTGTATGCGTGAGTTGGAGCTGATTGGATTTGTATG
GGAGTCAGCAAGGAAGTGCTTTGACATCCTCAGATGTTATAAATATGATG
TTCTATTATATTATATTATATGTGTATAATCAAGTGCATTACTACACTTG
TATCCTACTAGTCTGTATGACACACTTGGGTCTAAGTCTTCCAGAATGAA
ATGAATACTAACACCAATAAGGCAAGGATCAGTACACTTATTGAAGCAGC
AGTTTTTCCAGATATTGATTATAAGAAGTTTGAAAGCAGAATAATCTAGA
AATGTGGAAATATTTCAACAGTATTTGATATAACACTGCAGTGAGATTTT
GCTTGTCAGATATTACAAAGGTATTGTATATTCCTTGCTATAAAGCACTG
TCTACTAGAGCAACTGTTTGTTGCTTTGTTACACATCGCTGTGTGCAACA
GCAACAGATGTCATTTTGATGCTTTGCCACAGTAACAATGATGTTCCAAT
GACCCATAACATGTATTTTTGCTCTTTTGTGTTTTTTAAAACACTTTATG
TCACCAGTAGGGTCATGTCGCAGCACTAGTGCTACCTAGTTTTATCACTC
CAGTTTCAGAGTGACCATCAGTAAGTACATGTACAGTAAGTGCAACTCAC
TCGTACATGAGGAGCTTTTTTAATGTAAAGATGATGAAAGTGCAAGAAAC
TTTCAACTGTCTTCCAATGCTGCTATATTTTTAAACATATGCTGAAAAAT
AATATGTTGATAGCTTTGTAATTTTTTAGATTTGTAGCAATATTTTATAC
TTGGTGATTAAAGATAACTATATTACATTAAATGGGGATCATGGGTGTTT
GTATGAATGAATAAATTTCAAAGCATTATTTTGAAAACATTGTCTTGTGG
CCTGATTACTAAGTTAGGATTACCTAACTAATCCTTTTCCAGATGTCTGT
GCTTCAGGACTAGACTATCTGAGCGTAGGCGTGATGCACTCAATTTTCCA
ACCAACTGAAGATTACACCTGGCTGGCTTATGACCT Coding sequence (CDS) from alignment at Sc0000098:407124..414959- >Blg01745.3 ID=Blg01745.3|Name=Blg01745.3|organism=Branchiostoma lanceolatum|type=CDS|length=1506bp|location=Sequence derived from alignment at Sc0000098:407124..414959- (Branchiostoma lanceolatum)
ATGGCACCCAGGAGCTCAGCTAAACCTCGCCACAAGTCAGCGATCCTGCC
GGGTACAGCCGACACTGATGTGACGTTACCGGCCGGGATCATGTGTATCT
GTGAGCTGTGTGACTGTGGGCGACACAAGCACCACAAGGGATGCAAGAAA
GTCCGAGGCACAGGCATACAGGGAAAGATGGGTGAATGCACGCTCACCCA
CTACCAGGAGACTTTCAAACATCACAGGGTTCGGCCGCGCATGTCGAGAC
GTCCCCCGCCCACCGCACGCGACCCCCGACCTGCGCGTATGGACTTCATG
ACGGTCCAGAAGAACGACTACCAGCTGCCGGGGGTCACAGGTCGCGTCGG
ACTCATCAAACAGGAGGACAACTACGAATTACCCAACATGCCTGTGGAGG
GGATGACAGAATACAGGAAGGAGTTCTTGGAGAAGTCGTCATCTCCCGCA
CACCTGACGCGTCCCGTCACGACCCACCAGCCCGCCAGACACAAGCTGGA
CTCCCGCACGGCCAACCGCGACTTCTACAAACCCTGGGTGCCGCAGCCTC
GCTTCCAGTTTGGTGAACTTCCGACTTTCACAGGCTCCATCCTGTACCCG
AACCCTTCCGACTCCAAGAAGCACCTGAGGTCCGTCACCATGGCTGACTT
CCCTGAGAAGCTGGCTGGTAAGACGGAGCTGGTCAAGTCTAAACCAGACA
ACATCTTACTGGAGGGGAGCCACGACCTGGAGACCACCAACATGAAGACG
TACCGGGGTCACAGGGACGCCGCGCCGGCCAGTCGCGCCCCGGCACGTGA
CCAGGAGATGGTTATTCCCAGGAGAGGTGACAAAAACATGCAGACCAAAT
ATCAGTTTGACTTCAAAGGCAGGAGGCAGGCCCGGACCAAGATGTGCACC
CCGGCTCCAGAGACCATCAGGCTGACCATGCAGTCACGCATGCGCAACTT
CGAGACGGAGCAGATGGGGTCATTCCCGGGTTACGACGCCCGCGTGCACC
CGCGACCCGACCTTATAAGGAAGGAACAGGAATACCAGACGGACCCGAAC
CTGCCGTTTGAAGGGACGACCATCACGATGCAGGACTTCCGTACTCAGGA
CCTCCACGGCGCGTACAACGCCCCAGCCGTCCAACCGCAGCCCAGCCTGA
AGCCCACCAATGCCAAGCTCGACGGCACCACCATGAACAACCAGTTCTTC
CAAGACTGGGGCACCTCGCCGCGCGTTCGCTTCGGAGACTTCCACGAGGG
CCGCTACATCCCGCCCCTGAGAAAATTCGAAGGATACTCCACGACGAAAC
ACGAGTTTGTTCCGCTGAAGGCGGAGAAAGTGACCAACTACAAACCGGAG
AACAAGCCAGTCGCTTCACTCGGCGAGCAGGATCTGACCACGATATACAA
GCAGGACTTCCTCCCCGTGGAGAAGCCCATGTGCCGCGCTGAGGAGTACC
TCCTCAAGAAACAACTCAAGAGCATGAAGAAGAAGGCAGCACAAGCAGCT
GCTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01745.3-exon-Sc0000098-1570713199:414401..414959 | Blg01745.3-exon-Sc0000098-1570713199:414401..414959 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:413275..413418 | Blg01745.3-exon-Sc0000098-1570713199:413275..413418 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:412305..412582 | Blg01745.3-exon-Sc0000098-1570713199:412305..412582 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:411588..411754 | Blg01745.3-exon-Sc0000098-1570713199:411588..411754 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:410917..411159 | Blg01745.3-exon-Sc0000098-1570713199:410917..411159 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:410306..410508 | Blg01745.3-exon-Sc0000098-1570713199:410306..410508 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:409141..409777 | Blg01745.3-exon-Sc0000098-1570713199:409141..409777 | Branchiostoma lanceolatum | exon |
| Blg01745.3-exon-Sc0000098-1570713199:407124..408312 | Blg01745.3-exon-Sc0000098-1570713199:407124..408312 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:407124..414959 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01745 |
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