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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0001169:2354..10408- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01730.17 ID=Blg01730.17|Name=Blg01730.17|organism=Branchiostoma lanceolatum|type=mRNA|length=8055bp|location=Sequence derived from alignment at Sc0001169:2354..10408- (Branchiostoma lanceolatum)
AAGGCAACCTAAGCATTATTGGGTCATTACAAATGCAAATATTCTGGATA
AGGCAATCTTTCTTACATTGACATTAACATCCCCATTTAAGTACATTTCC
ATCATTATTTCATACTTTGGGTGTTTAAAAACAGCGTAGAAACAAGCCAC
AAGAAGATTATCTTATTTAGGGGGTCCCCCAAAAAATCAGACCAAATCCA
GCCGTAACGGTTTTCCTTCGACAATGTTCGGCAACTTCCGCCGAGTGACG
TCACGATTTCCAAGCCGGGTCGCAGGAGCATAATCAAGATGGCGGACGTG
GACTCCGGTGGTTCCAAGACACCGAGAACGAGAAAGCGTGGGCGACCCGC
TGTTGATTCGACACCACTCAGGAAACAGAAGAAGAAAGAGAAGTACCAGT
CTCGTGTATACCTGGGCGACAGCTATAAAGATTGGAGTAAACTACGACAG
GAGCTCAATGTAAAGGATCGCGTCCTTGCGCGCAAACTGTTGGACAGGTT
TGTTATTTTTCTCTCACATTTTGTCGCTCTATTTTTACCTCTATCTAATG
TGGATGAATCTTTGCCGAAAAATTATCGAACTCGGTCATAGTTAAAGGTT
GTGTCGAATCTTTTTATATGTACGATTAGCGTTTTGTGTACGTTTTCTTG
GTTTTTTTAACTCACCCAAACAGCGTTACAGATGCATGTTTGGCCGCGCG
GCCTTTGTCGGTGGCCATTTTGATTCTGGCAAACAGCGCAGTATACACTA
GTTGTAACACCGTAATTTTTAACCTCACTGGTTCTAACCCGGTTCTTGGA
GGTTGCATGCTGTTGCTGTTTTTTTCGCTATGTGCCATAGTCATGTTTTA
TGATAATACTCTACATGAATAAAAATGGATCGACATTCTTGGAAGGTGTG
TTTTTTTGGGGGGGAGGGGCTACAAATGTACATAGTGTACTGACAAGTTA
TGTTTCATGGAACCCGAGCCAGTCACAAGCAATGAATGTCATGAATCGAA
TGTGTGGGCTTCTATTTTCTAATTAAAAAGTGACAATGGCAAATTTTATC
AAGGCGCCTAAGAGTAAGACATATGAATATGAGTAAGACAGTACATCGAG
ATGTGTGTTCAAAGATTCAGCAACACGTTTAGTGTTGAAAAAAGGTTTAT
AAACAGTATTATTGTAGACTAGTGCGGTATCATTTTGTGCTCTTTTTAAA
AACATTTTATATATAATTCCTCCAGTTACGAGAAGCACAACAAGTCAGCT
CCAAGGACATCAAGCCCCAAAAGGGCCACATTACCTGTCCCTAGCTTCTT
TGCAGATGAGTCAAGTGTTGGGATACATGATCCAGCTGATGACAGATCTG
CCTCTGGCTTCATTGTGTGAGTATGGTACTCACCACTGGACTATTACTCT
CTTATTCAAAATTAGAAGATCATTGTGTAAATTTTACACCAGCAACAGTC
AGCTGGCTGTTTTTCATCAATTTTTGTTGCAGATTACATGGTACATGTTT
TTATTATGTAGAGGTAAAGTTGAGTTTGTTTTCCTTTTAATGGAAAGAAA
GGCGACTTGTAACATGGCATGATCAATACAAACCCATGTGCCAAGTAATC
AGTGTAATGTACTATTTGGTAAAGAATCAGACATAGGGGTAATGTTATAT
TATTGCTTATCTAGGGGTATGATTCTAAACCTAAACCATATACCATGTAC
CTGTAAAATCATTTAGGTTCAGGTCCAGACCTAAAAATCATGTGAACCAG
TAACTTGTACCTCCTTTAAATCTAATGTACGTACATATTGATTTCAGAGA
AAACATGTGTCTGTCACCACCACATCAAATCCTAGAGGGTGCTGTGAACA
GGTCACCGCAACATGACATGGAGGAGGGTGCTGTGAACATGGAGGAGGGT
GCTGTGAACATGAAGGAGGGTGCTGTGAACATGGAGGAGGGTGCTGTGAA
CAGGTCACCGCCACGTGACATGGAGGAGGGTGCTGTGAACATGGAGGAGG
GTGCTGTGAACAGGTCACCGCCACGTGACATGGAGGAGGGTGCTCTGAAC
AGGTACTTTCTTTTCTCATGAGATTGTTGGAAACATTTGTTCTGAAAATG
GTATGTCTAGCCTGGCTGCATATAGTAGATTATATACTCAAAACAAATAT
TTGTTTTCAAATAAACAAAGCATGCTAGTACTATTTACCCCATTTGATAT
TTCTAGAATTTGAGTGTGTGTGTGTGTGTGTGAATACCCTTCTTGTACCC
TTGCATCATTTTTGTTTAGCACATTGGAATTCTGAAAGATAAAATGAGTC
ATTCTACTATCATGTATTCCCTTGTTGAAAGCTTTTTCTGTAATACCATA
CAGCATATCCTGTCTTCAACCCAGGAATCCGGTGAATGAGTCTGAAGTTG
GTGCCCCTAACTGCAGATCCGATGTTTATCCCAGGGATCCTGAGAATGAG
ACAGAAATCAATGCGCTGGAAAACATTCAGTAAGTAGATGGCATATTTTA
CCTTCCAGCACTGATATTATATAGAAATTACACATTGTATTGCTTTGTTT
TCAATTGAAATTGGTATGCTTAGCTTAGAGGAATTTGTGTCTACATGTAC
ATGTATGTCTTATTTGTTTTAGCAAGGTCCACAAGTTGTATGTGCAATTT
AACATACAAACCAAATAAACAAATACTATAAATGTTGTCTCACAACATGC
CTTTGTATAGGACAAATAACCATAAATCTCTTAATCAATGTTTTTTATGT
TTCATCCAGGCTTTCTGTCGAACTTGATGTATGTGAGGCCGAGGATGAGG
ATGAGGATGACCTCTGCTATGATGATGATGTAGAGAATGATCCAGACTAC
ATTCCTCCTGCAGCACTCCGGTATGTTCCTTTGCTCCGATGTGTGTCTGT
GACTGATTGTTAGTATGTGTGGCTGTGTTTGTGGGTGGGGGTGTTTAGGG
GTATCTGTTGGTAACCAAGTACTGTCTCAATGTATATGTTTCATGGTAAG
TAGAGCACAGCTATCACAAATGTGGGTGATCAATGACATTTTGTAATGTA
TCTGCTTAGTATTCATCTTTTCTTTCCACTATATTTCAGATCATCGTCCA
AACTTTTGGGCAAGGACATCGAGGAGTACGAGGTCATAACTGCCGAGCAG
GAGGTGTTCTGCCACGACATGGCTCCTGGAATGGGGGACACCTTGCTAGG
AGAAGAGAGCAGCGCCACTGAAGAAGAAGCGTCATTTGAAGAATCAGATG
TGGACAAACGATTCCCACGTGAACTGAAAATTCTTCATCCCAATGACATT
GTCTACGAGAAGTGCGCCATCACCTACAATCGCAATATTGTTCAGCTTGT
CGGTTTTCTCGAGCTCCCTGCCGACAAGCAGAAGTGCCGTGTGCCAGACT
GCTCAAGTAGTGGACCACCTGAACCGGCTGTGGAGTTTGTTGCAAGTGGA
ATAGTCGTCAAATGGGTAAGCTAACCCTTTTTAGTCAATGGCCAACTTGC
TTTACATGCTAGTCTGCATTCATGTCCATGTATGATATGCCCCCCCTTCA
TCTGTCTTCCCCATTTACATTACTAATGACTTATGAGCCTCATTTACAAT
CTTTAGAATGACTAGTATTGCTTTTACATGTTCTGTTCACTACATCTTTT
ACTACAGCACTGCAGTGGTGGCCATCTGGTCTGGAGATGGTTCAGCCAGC
CCAGACTGAAGTACGGCCTACAAGGAGGAGATTTTATGCAGGCCGCAAAT
ATCCTACTGTCTGGCAATAACTTTGGGAAGTATAGTCTGATGTGCAAGTT
CATGAACATGGGCTGTGTCAATGAGTCTACCTTTCACAAAATCCAGGCCC
AATACTGTGTGAACACAATTGATGACTACTGGAGGGAAAAACTACAGGGG
ATCATCCAAACACTGAGGAACAAGGATGAGGTTGTTCTCCTTGGTAAGTG
CACAAGTAGTGTTATGTTATTTCCTTTCAATCTGTCTGTGGACAAAACAT
GGCATCACTGTTCTTCATGTCTAAAACTGAGAACCACGAGCAAGATGGCA
ATTTGATTTCTTTTTTCTTTTGCCTACAAGTTTTGTATGCCAGGTGTAGT
CCCAGCTGATGAATGTTTGCTATTTGTATTGTTATACTTTTTCTCGTGAA
CATTGTGTTCCAGAAAGATGATGGCAGGAATGTTAGTCACCTCAAACAAA
CTTGACATTAGTTAGATGGTTTCTTCTTTGCTGTGTTGACTCCACTCCAT
GAAGAGGATAGTAAAAAGAAACTGGAAAGAGTTTTAAAAAAAAATTAGTT
TTATTTGCTTGCTTTATACACAGGTGACGGACGAATGGACTCCCCGGGTT
ATTGTGCCCAATATTGTACCTACACCGCCATCGACAATGACACAAGAGCC
ATTGTGGCTCTTGAGGTAGTGGATAAAAGAGAGACAGACAAGAAGTCTAC
GGTCATGGAGAAGGAAGGATTCAAGAGGGCCATGACCAGCCTCTTGGACC
AGGGTGTCAACGTAACCGAGGTGTGCACAGATGCCCACCCCCAAATCAGC
GCACTGATGAGTAAGTACAGTGGAACTATAGAATGTCACATTGCATAAGC
TCTAAGGCAAACAGCTATTACATCCAATGGTTTTTGTATACGAATTAGTA
CAATGCAAAACTGAAGTGATCTGATGGATGTGGTATTTTTAAAACAACTA
GTAGTACTATCGTAGTTCACCTTTACTGGAGAAATATATGCTATCACTTA
TTTTGCAAAGATCAACTTGATTCATGGAGAACATTCTATTTCATGTAAAC
AGATCCAGACAAAGGCGTCTATGGGACGAAGGGCATCCACCATTCTCTAG
ATGTATGGCACGGTGCAAAAAATCTAACCAAGAAAATAGTGGCAGTAAGT
GTACAGGAACAATTTAATCTAATATCATTTATATAAACAAAATGGGTAAT
ATTTAACTACACTGCCTTTTCTAGTCTTTGCATATGTCTTATAAGAATAA
CATTCAGGCAGACTGACTAACTAACTACATGGAAGTCAAGTACAGTCACG
TCATCATTGTTGCAAAAGGTCAATATTACACATGCTATAATATGATATGA
TACATGTATGATATGATGATTCCATAGTTCTGGTATGTCAGAAATAGGTG
ATGCTGGCTCTTGCAAGGCCCTTGACAGAAATTGAGATAGTTGAAATTGT
TTTTTATTCAACTAGGCTGGACAGGAGAAGTCATGCACGGACTTGAAACA
ATGGACACGTGACGTTGTCAACCACTTCTGGTGGTGTTGTAAGAAGGCAA
AGACCTATGAAGAGTTCAGTGTAAGTATTATATTCTATACATCTGCAAGT
TAGGGCCTAAATGACAACATCTACAATTGTAGTGCTTTCAACATAGCTTT
CAACATAGTCTTCTTTTAAAAGTAATCAAACAAACAACTAGCTACAGAAA
TGAATGCTAAGGAACACAATTCTATTCCAATTTCTATTGTTATATCGATA
CAGTGTAAGATATGCTTTTCATATATGGATTGTCCAATGACAATTCTATT
CAATGCTTTCTTTTATGATTACACTCGTGATTATGTTACGTGCCATTAGG
CGCTGTGGAGAGGGGTTCTTCACCATGTGTGTGATGAACACAAATGGGGA
ACAGGGTCGTGCCAGCACGAGCCAATCGTAAGCAGCGAAGCCAGGACCAA
AAGCTGGCTTGTTCCTGGGTCAACAGCCCACAAGAAGCTGGGCGATGTAC
TACTTAAGAAGAGGTGGCTGAAGACAACATCAAAGTATTTACGCTTCAGG
TACGAGTACTTTTATGTCTTAGAATTTAGATACAAGATATAATTGCTATG
TCTTTTTGCCATACTCAAGGAGAGTGACATGTGATACCACCTCTCATCAA
ACATCTTAACTGTTCAATCTTACAAAAGAAACTAAATTGAATCAAATTCG
CCATGTTGAACCTTTTTTTTTGTTCCAGAACAACATCAGATTTGGAATCC
TTCCAAAATCACATTCTGATGTATTGCTCAAAGAGGCATTCATTTAGCCC
CCCTGTGTACAAGGCTAGATGCCAGCTGGCTGCACTGGATTACAACCATC
ACAGGGACAGACCGGTGTGGAAGACCAAGGAGGGTCGGATCAAGTAAGTG
TTTTCCCTTGCCTTTGTTACAAAGCTATCATGAAGTGAATACAGCAATCA
TGTGCTAGAGGTATTGCAGCACCAACCTCAGGTAGTAATTTCCTTAGATA
GGATGATTATCTGTAGAAATTGGTTACAGGCATGTTTTTTTTACAAATTA
CAAATATGATGGAAATGTTTTTGTTATCTAACTGGGAATGTTGCCCCTCT
AAGATTGTCAGTAAAGTCGACTTTTTTGTATGCTTTCAGCTACAAGAGGC
GATTTCAAAAGAAGTCCGAGCGATGGTCAATCTTTGTGCCAAAGCAGCCA
AAAAAGTATGAGTACATTCGGGAGTTGCAGGCTGCAATCGTGAACAAGAG
GATCCAATCAGGCTGTGGCATGAGTAGAACGCAGCCTATGTCGGAAAGTG
ACCCCAGGCGGACGGGCAACCTGGCACGACTTCCACCGCCACCAATCAGT
GAGCTTGTAGAGAAACACGTGTCCAGGATGGAGGGTGCCACTCAGGACAC
AGAGTAAGGTGTGATGATGAAGATAGTTGCATGCAATGCAGTCGTTGGGT
TCCCATATATGCGGATTGTACATTACATGTTCCTTTTTGCTCCTTTCCCT
TGGACCAAATTCTTCTACAGTGAAAAGTTTTGTTCCTCTCCGTATCAGAA
AACATTTAATGAACAGTTCTGTATACATGGTCCCAATGACTGCACTGCAT
TCAACAGGCATCATCATCACTCCTCACAGTCGGTTGGCTATGAAGCCAGT
GTAGTGGCTGTGAGGATCAGGGAAAGTGTCCCTGATCCTCCACACGCAGC
AACTGGGTATTACTACTCGATTACCTTCACCCAGTCGGCCAAATTGCCAT
AAAACAAAATGTCGGTACGCTGCGTGGCGGAACTCCCTGTTATCCGCCCC
AGGCTCTTGGTCATCCTGAAATGCTAGTATGTCGTTCCGGTACATCCTCG
CAAACCGTAAGGTGCCAGGGTCCAGGATGTACAAGTCCATGTCCTAGAGA
AAAAAAGAATGCTTTCATGACTGCATATGTTGATATGTGCAATGTACATT
TATTTATGTCGGATATCCTCACATGATTTCTGTATGTCCGTATTTGCCCT
GCTATCTATGAGTGACAAACCAGTTATTGCTGTATGACTTAGTGCTTAGA
GATGGTTCCATGACTAATTACTGCCATGTATTATTCAGTTTTTTTTTCAT
ATGTTGTGCTGACAGTTAAAAATGCTTTTGTGTTATTGCCCAAAAGAAAA
ATACTGACTCACATTGATTGTATTCTACATCATGCCTAAAATATCACACG
TAACCACTAAAACGATTATTATCTTCTTTATTCTATATTTCTTCCATATT
AGAATGTTCTACTTGTACCATAAAAGACATCAACATTCTCTATGGACGAT
TTTCTGTGGAACTCTAGTGCCCTTCAGATTTCTTTACAGGGACATGATAT
GTTTTGTTTGCAAAAAATAAAGTCTACTTGTTATACTGTTGTAAAAAATG
TCTACGATGAATTATGATTATTACATGTATATCTATGTAGCAATTAAGAA
CAACAAGGGGTAGCACTTACAGCAAGTCTGGAGACGCAAGAATCTGGCTC
ACCACCGCAACAAATCCTCTCCTCATCCTTAGGCATCTCCCGGCAGCGGC
CACAACTGCACCACTCCAGGTCACCCTGTGCCCCACCACCGCCATCACCA
CCGCCATCACCACCATTCGCTCCAACAACCCCACCCTCAGCTCCAACAAC
CCCACCCTCGGCTAAAACAACCCCACCGTCGGCTCCGCCCTGGGGGGGTG
GTGGATGCCCTGGTATGTCCTGGGGGGGTGGTGGGGTCACTGGTCTGTCC
TGGGGGAGTGGTGGATGCCCTGGTCCGTCCTGGGGGGGTGGTGGATGCCC
TGGTC Coding sequence (CDS) from alignment at Sc0001169:2354..10408- >Blg01730.17 ID=Blg01730.17|Name=Blg01730.17|organism=Branchiostoma lanceolatum|type=CDS|length=1389bp|location=Sequence derived from alignment at Sc0001169:2354..10408- (Branchiostoma lanceolatum)
ATGTACGTACATATTGATTTCAGAGAAAACATGTGTCTGTCACCACCACA
TCAAATCCTAGAGGGTGCTGTGAACAGGTCACCGCAACATGACATGGAGG
AGGGTGCTGTGAACAGGTCACCGCCACGTGACATGGAGGAGGGTGCTGTG
AACATGGAGGAGGGTGCTGTGAACAGGTCACCGCCACGTGACATGGAGGA
GGGTGCTCTGAACAGCATATCCTGTCTTCAACCCAGGAATCCGGTGAATG
AGTCTGAAGTTGGTGCCCCTAACTGCAGATCCGATGTTTATCCCAGGGAT
CCTGAGAATGAGACAGAAATCAATGCGCTGGAAAACATTCAGCTTTCTGT
CGAACTTGATGTATGTGAGGCCGAGGATGAGGATGAGGATGACCTCTGCT
ATGATGATGATGTAGAGAATGATCCAGACTACATTCCTCCTGCAGCACTC
CGATCATCGTCCAAACTTTTGGGCAAGGACATCGAGGAGTACGAGGTCAT
AACTGCCGAGCAGGAGGTGTTCTGCCACGACATGGCTCCTGGAATGGGGG
ACACCTTGCTAGGAGAAGAGAGCAGCGCCACTGAAGAAGAAGCGTCATTT
GAAGAATCAGATGTGGACAAACGATTCCCACGTGAACTGAAAATTCTTCA
TCCCAATGACATTGTCTACGAGAAGTGCGCCATCACCTACAATCGCAATA
TTGTTCAGCTTGTCGGTTTTCTCGAGCTCCCTGCCGACAAGCAGAAGTGC
CGTGTGCCAGACTGCTCAAGTAGTGGACCACCTGAACCGGCTGTGGAGTT
TGTTGCAAGTGGAATAGTCGTCAAATGGCACTGCAGTGGTGGCCATCTGG
TCTGGAGATGGTTCAGCCAGCCCAGACTGAAGTACGGCCTACAAGGAGGA
GATTTTATGCAGGCCGCAAATATCCTACTGTCTGGCAATAACTTTGGGAA
GTATAGTCTGATGTGCAAGTTCATGAACATGGGCTGTGTCAATGAGTCTA
CCTTTCACAAAATCCAGGCCCAATACTGTGTGAACACAATTGATGACTAC
TGGAGGGAAAAACTACAGGGGATCATCCAAACACTGAGGAACAAGGATGA
GGTTGTTCTCCTTGGTGACGGACGAATGGACTCCCCGGGTTATTGTGCCC
AATATTGTACCTACACCGCCATCGACAATGACACAAGAGCCATTGTGGCT
CTTGAGGTAGTGGATAAAAGAGAGACAGACAAGAAGTCTACGGTCATGGA
GAAGGAAGGATTCAAGAGGGCCATGACCAGCCTCTTGGACCAGGGTGTCA
ACGTAACCGAGGTGTGCACAGATGCCCACCCCCAAATCAGCGCACTGATG
AGTAAGTACAGTGGAACTATAGAATGTCACATTGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01730.17-exon-Sc0001169-1570713199:9912..10408 | Blg01730.17-exon-Sc0001169-1570713199:9912..10408 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:8521..9183 | Blg01730.17-exon-Sc0001169-1570713199:8521..9183 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:8357..8457 | Blg01730.17-exon-Sc0001169-1570713199:8357..8457 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:7930..8055 | Blg01730.17-exon-Sc0001169-1570713199:7930..8055 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:7539..7649 | Blg01730.17-exon-Sc0001169-1570713199:7539..7649 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:6944..7319 | Blg01730.17-exon-Sc0001169-1570713199:6944..7319 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:6466..6751 | Blg01730.17-exon-Sc0001169-1570713199:6466..6751 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:4610..6085 | Blg01730.17-exon-Sc0001169-1570713199:4610..6085 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:4266..4430 | Blg01730.17-exon-Sc0001169-1570713199:4266..4430 | Branchiostoma lanceolatum | exon |
| Blg01730.17-exon-Sc0001169-1570713199:2354..4019 | Blg01730.17-exon-Sc0001169-1570713199:2354..4019 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001169 | genome | Sc0001169:2354..10408 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01730 |
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