Blg01695.2 (mRNA) - B. lanceolatum

Overview
NameBlg01695.2
Unique NameBlg01695.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0000390:530..6156+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01695.2 ID=Blg01695.2|Name=Blg01695.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5627bp|location=Sequence derived from alignment at xfSc0000390:530..6156+ (Branchiostoma lanceolatum)
GGTTTCCTAAGCACAGAAGACAGTAATGCTCAAGGAAACTACGGCCTGTC GGACCAGATCAAAGCTCTGGAATGGGTGAACAGCTACATCAGCTTCTTTG GAGGAAATCCACACAACATCGTTATCTTCGGCTCGGGAACAGGGGCTGCG TCAGTGCATCTACTGATGTTGTCTCCAAAGGCCAGAAGTAATTTTATTCA TTATCATGTCGCTTAGAAAACATGAAAACGTTAACAAACATAAAGACGGA AATCTTTCCTTCCAGTGCTGAAATATCTTTGAATAAGAGCTTTAAACTAC TGGCATGTCTTCTGACGTAGATATTTATGCACGGCACAATCCCTTTTCAT TATGCCAGCGTGCGCAGTCATTATTCACAAACATCCCTTGTTCACAAAAT TATGTCTTGACCTTACATTAACTACATGTATATCACTCATATGATATTGT CGTTCAGAAATATTTTTTCTCGTTGTCATCAGACAAATTTCGGCGCGGTA TATCGATGAGTGGATCGGCCTTAGCGACATGGGCTATGAGCCGTAACGGT AGAGTTTATGCTACTGCGGCGGCCAAACAGGTGAGCTTTTTGTTTGATGT TGACTGAGGCTGCTGTAGTAAGAGAAACCGCCATCTCGGTGGTCAAGTGA ATGCTATTGTGTGGACTATTATGTGTATGTTGACCATTGAACATCAACTC TTGTGCTGCATGGACAAATGGTTTCAAACGTATATTGGATGTGTTAAGAT AAACACTTTCAGGGAGGGAGGTACACTATATCACCTTTTTCGAATTGCTA TGACACGTTGTTATTGATTTTGCCATAAACGTCGCGAAGTGATTCATTTC TGTAGTCAATAGGAGTCCAACTATTAACGCTTCTGTGTCGGGTAAGCTGA TTCCGCATGGGGCTTGACACGGCAGCAAATTCCTGTACTAGCAGCTGACT TTTTTAATCCATGCATCATACGTGATGGCTTGAGACATTCTTCCAGCCGC ATGCATGTCTACCACAATGTCGTCGAAACAGCAGCATTTTCTTAAGGTCT AATAAACTCTGAGTGTGAATCTTCTGATGTCGCTATCGAAATGATGGTGT GAAAATGAATGAAACGAAGACGTACTTTGAATGAGCGCTAGACTCTTTAA TTCTTCACATAAAACCTCGTATGCCACGATTCTTTACTTTCAGTGGTACT ATGTACATTATATCATGTCAGGAAGTCAACACAATTTTCATAGAAATCCC ATTTGATTTTGCTATCATGTAACCCGGCTTCGCATTAAGAATCAGAAGTG TTGTAGACAGTGGGATTTTTCAAGTTCTAAGTTCTATTTAATCAATCTAT TGGAAACAGATTGTCCAATCGCTCCTATATCATATGTAACCAAGACAACT GCACGGTAACCAAAGCTAGAGTCTGCAAATATCTGCAACAACAAATGAAC GGAAGGTCTTGACAAACCCTGATAGGGATTTTAATCCGAATCTGTATCTG CTCTTCGGATTCGTAGGCACGCTGCATGACAGCAGCTGGTCATATTACAC TGAAGGACTTGCAAGTTGCCACACATAACCTTTGCACAACTAGCATGCAA GTCAAACTTAAAAGCTAGCGAGGATGCCCCAACCGTACTTGTTGGGAACG GATCCCATTTCTGAATCGAAGTATGAAATAACCAGTGAACATCAATAATG TAACGTTAACAATTATAAAATGGGTCCTGATGATCTGAGTTTTTATTTGC CGACTATTTGAGGGAGAGCATTGCATATTTTGTTTGTTTGTTTCTTTGTC TAAATGGAGAGTGTTTAAGGAGGCCGTTTTAGCACCCCCACCCCCTACAG TGTCAGGAGACAAAGCACGGTTATTATGGTTTTAAGGTACACGACAACAT ATGTTCTACCATACAAAATAATGACTACATGAACATTGTACGACTAAACG TGATCTTCTTAAAAAAACTGATCTGTCTCTCACGGTTCAAATGTAGCCAA GCACGTTCTGTACCATACATCATAAGATATGTGCACTAGATGTACTCTGA TTTTTCCTCCCAGGTGGATTGCGATAACAGTGACACAAAAACTATGGTAG ATTGTCTCCGTGGGAAGTCTGCAGACGTTTTGGCTAACATCAGTACATCT ATAGTCGAGCCCTCGCGATATTATTTCGCCTTCGCCCCTGTGGTTGACTA CCTCATCATTCCCAACGATCCAACGAGGCTGACTACAAAGAATATGTCTA ATTTGCCGCACGACTACATGGTCGGTGTGACGGAAAGTGACGGCTTTATG TACGTGGACGGAGTGAAGGGTGTTGGGGATGATGGCATCAACAAGGACGA TTTTGAAGGCCTGGTAGACAACTTTGTGCAGCAAGTCTTTCAGAGTAGAC AGCCGGAGATCAAAGATGCCGTGACGTTCAGCTACACCGACTGGAGTGAC AGAAACAACGACATCAAGAGGAGGAAAAGCACCGTTGCTCTCTTTACGGA CTACTTCTTCGTACAGCCGGCAGTGACTACCCTGAACGCGATCGCGCCTG TGCTAAAAGGAAACACGTACTTTTATGCCTTCCTGTACAGGGGAGAAGTA GGCTTTGGACCGGACTGGGCTGCCGCTGTCCATGGTGAAGAGTTACCATT TATATTCGGAGCTCCTGTGGGCACTCAGCTGGGAAAGGGTGCGCTGTACT CATTCTCTAACTTTACCAATCAAGACAATATGTACAGCGTTGCTCTGATG ACGTATTGGACCAACTTCGCCAAAACCGGGTAAGTGGACATGTTTTTTGA ATAATATGACTTAAACCTGCTTCTCTTTACGGATATATACCGCTTTCTTT GACAAAATTTTCATATTTGCTGAAATGTTTTGAGTTCAAGCACTTCTTGC CTATTGTTAGGAAATGTGTAGGTGCGCCATTTATGAAGAGCTAATTCAAG AAATGGTCACACACCTAGCCAACAAGTTTCGTTATCCAACCAAGCTAGTA GAAATAAATATCATAATAATGTACTTAATCTGACTCCCATGTGAAAAGAA TGTGGTTTTGGTGTATATGTTCATTAGAGGCATATACCTTCAGCGTGTTG CTACATTGATGTAAACCATTTTGGAGACAGGCACTAATGTGGCGTTCTTT CCAGGAATCCAAATCTGCCAGGAATGCAAAAGCCATCTTTTCTCGGCATC AGGCCCAACAAGTTCGAAGGTGTAGTTTGGCCGAGGTACACTCGAGAAAA TCAGGATTATTTGTATATGGCCATGAGACCAAGACAAAGGGACAATTATC GTGCCAACAAACTGATGTTCTGGATAGAATGGTTACCGAAGGTGCAGGTT CCGTCGCAGATGGCAACGCCTCCGGGACAACCTGACCTGTCCAAGTGTCC AAATTATCCCCCCACCCGGGGAACGTCTGTCCGGTGGAGACCCAGACCTG GGCCGGATGTGCTGATTGGGCGGGGGACCAAGTCTCCGCCTGTGCAGAGC AGTTCTAGGGAGCTGAACGTCACTATTGCAGTTGGAGCATCGTTGTTACT TATCAACATCATCGTCTTTATAGTGGTGAACTATAGGAGAATTGACTGTG CGGCCTACCGCAGGAGAAAAAAGCGCACCGACAAGAAAAAGAAGCTGAAC GCCAACCATTCAGGAAGCATACCATCTGTGAGGATATTGGAGATCGGGTG AGTGCCCTTGCGAATTTATCGTCTCTGGTAAGATATTAGTGCTTGTCTTG TTATTTTCATTAAAAGGAATACAGCGCTATTCATTGACTAAACGTACTCT TTCCTGTCCTACTGTCACAGGCCACCCATTCGAGGCCAGGACCTTATGCT GACACCAGAGGAACCATCTGGGAACAGTCGGTCATCTTTGGACTACTATC ATCCAAACAACCACATCGAACAAACTTCCCAACTCTGACAATACCGGTAC AGACAGCTGATACAGCTTTTGCAGCTGGGCGGTTTATTTCAGTCCGCTCA CAGTAAACAAATCACAATCAATGAGGAACAACCAACCCTACTGTTTATTA TCTTGCATTTTAGAGGTGCCTTTTTATCAAAGGACATTGTTTTGCAAGAA CAGGCCCTTATGTATAAAAAGAAGTTTACCGTGTCTACAGTATATGAGCT GTAAAGAATATGTAGTGCAAGCTACATATACTATATGTACCAATGGTCAA CATTTGACACATGGATTTTCCACACAGTCTTGGTTGGATAACGATACTTG TGAGGAAGATGGAAAGAATCAGTGCTTTCGTCTTCCTTAAGAACATACAT GACAAGTTAAATGTCCATATAATGACATTATAAAATGTATATGAATACAT ATGTATACACACATCTATATATCTATATCAGCATGCATATATATATCGGC ATGTGATTACTCACGCTTTAAACAGCTGTACCTAGAAATGTCTGAAATAT ACGTAGGTGACTCCTTTGGTATTTTGTATTTTATCATTTTCACGACCAGC CTAAAATATTTATTGGTTACCACTTGTAATGATTGCAACAGTTTGGGTTG ATTTGTTTTAGTTATTCCGTTTTTTCTTAAGGTTTTATATTTCTCAATTG ATAAACATTTCAAGACTGATAACATATCATACATACACGGAAGAGGCACG CTGAGGCCCTTCTGTAGTATTTTCCATCCCGGCTTTGTTTTGAACGTCAA AAATTCGACACGAGCTATTTTGTTACAGAAACCCAAATCTACCAGAGGGA CAATCACAGTCATTTATGCACCAGGCGATGAACGTGTTTAAAGACAAAAC ATGGCCTCCCTACAATGGTGACTTCGGTTACTTGTACGTCGGGAAAAATG CAGCGAAGACGGATAGGAAGTACTACAGGGCTGCGAAGGTTGCCTTTTGG GTGGATTGGGTCCCGCATATAGCAGAACCACGCAACGACACCGACATCCG AGTGAACCACGTGATTGCCTACCCACCAATGAAGTGCCCCGTCGTTCCTA CGTCAGCAACAGAAGCTGCCTGGACGCCTAAATACCCTATGCCGGAGATC GTCAACGTTGGCCCACCTAAACCACAGGAAAGCAATTCTTCGCGACTTAG TTTCACCATTTCAATTGGAATAGTCCTTTTCGTCGTAAACCTTATTGTTT TTTCTATGTGGCTCAAATGGAAGAAAAAGATGAAAAAAGAGGAAAAAGCT AGTAAGGCACTGACTTCAGCTACTGAAGCCAATGGGCAGCCACGCTTGCA AGAAATAGAAGAAGCTGTGGTCGAGGAACGGTAAGTTCGTACCTGTAATG TTTAGGTGTCGTTTCTCCATGGGAAAGTGATCATATCAGTTTCAGGAGGC CAAGGGTATCGTTTTACAATCATTTGCATTTTCTTTGACGTCGACAATTT CGCCGATCTTTAGAGTGATTGGACTTCCATGGCATGTCAACATGGCCCAA AATGTACATTTCCAGTGTGAAAATAGCACCAAAGATCTTTACAAAATTAT TTCAATGACAACCAACCACGAAATATAGACAAAGGTCAAAGCACATGTTC CCAACATACTTGTACCAAACTGCATATCACTTAGCTGAAGTCTCACGGGC AGGTAGATGGAGTAATGTTGGGTTGTA

Coding sequence (CDS) from alignment at xfSc0000390:530..6156+

>Blg01695.2 ID=Blg01695.2|Name=Blg01695.2|organism=Branchiostoma lanceolatum|type=CDS|length=1557bp|location=Sequence derived from alignment at xfSc0000390:530..6156+ (Branchiostoma lanceolatum)
GGTTTCCTAAGCACAGAAGACAGTAATGCTCAAGGAAACTACGGCCTGTC
GGACCAGATCAAAGCTCTGGAATGGGTGAACAGCTACATCAGCTTCTTTG
GAGGAAATCCACACAACATCGTTATCTTCGGCTCGGGAACAGGGGCTGCG
TCAGTGCATCTACTGATGTTGTCTCCAAAGGCCAGAAACAAATTTCGGCG
CGGTATATCGATGAGTGGATCGGCCTTAGCGACATGGGCTATGAGCCGTA
ACGGTAGAGTTTATGCTACTGCGGCGGCCAAACAGGTGGATTGCGATAAC
AGTGACACAAAAACTATGGTAGATTGTCTCCGTGGGAAGTCTGCAGACGT
TTTGGCTAACATCAGTACATCTATAGTCGAGCCCTCGCGATATTATTTCG
CCTTCGCCCCTGTGGTTGACTACCTCATCATTCCCAACGATCCAACGAGG
CTGACTACAAAGAATATGTCTAATTTGCCGCACGACTACATGGTCGGTGT
GACGGAAAGTGACGGCTTTATGTACGTGGACGGAGTGAAGGGTGTTGGGG
ATGATGGCATCAACAAGGACGATTTTGAAGGCCTGGTAGACAACTTTGTG
CAGCAAGTCTTTCAGAGTAGACAGCCGGAGATCAAAGATGCCGTGACGTT
CAGCTACACCGACTGGAGTGACAGAAACAACGACATCAAGAGGAGGAAAA
GCACCGTTGCTCTCTTTACGGACTACTTCTTCGTACAGCCGGCAGTGACT
ACCCTGAACGCGATCGCGCCTGTGCTAAAAGGAAACACGTACTTTTATGC
CTTCCTGTACAGGGGAGAAGTAGGCTTTGGACCGGACTGGGCTGCCGCTG
TCCATGGTGAAGAGTTACCATTTATATTCGGAGCTCCTGTGGGCACTCAG
CTGGGAAAGGGTGCGCTGTACTCATTCTCTAACTTTACCAATCAAGACAA
TATGTACAGCGTTGCTCTGATGACGTATTGGACCAACTTCGCCAAAACCG
GAAACCCAAATCTACCAGAGGGACAATCACAGTCATTTATGCACCAGGCG
ATGAACGTGTTTAAAGACAAAACATGGCCTCCCTACAATGGTGACTTCGG
TTACTTGTACGTCGGGAAAAATGCAGCGAAGACGGATAGGAAGTACTACA
GGGCTGCGAAGGTTGCCTTTTGGGTGGATTGGGTCCCGCATATAGCAGAA
CCACGCAACGACACCGACATCCGAGTGAACCACGTGATTGCCTACCCACC
AATGAAGTGCCCCGTCGTTCCTACGTCAGCAACAGAAGCTGCCTGGACGC
CTAAATACCCTATGCCGGAGATCGTCAACGTTGGCCCACCTAAACCACAG
GAAAGCAATTCTTCGCGACTTAGTTTCACCATTTCAATTGGAATAGTCCT
TTTCGTCGTAAACCTTATTGTTTTTTCTATGTGGCTCAAATGGAAGAAAA
AGATGAAAAAAGAGGAAAAAGCTAGTAAGGCACTGACTTCAGCTACTGAA
GCCAATGGGCAGCCACGCTTGCAAGAAATAGAAGAAGCTGTGGTCGAGGA
ACGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01695.2Blg01695.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01695.2-exon-xfSc0000390-1570713199:530..716Blg01695.2-exon-xfSc0000390-1570713199:530..716Branchiostoma lanceolatumexon
Blg01695.2-exon-xfSc0000390-1570713199:1012..1109Blg01695.2-exon-xfSc0000390-1570713199:1012..1109Branchiostoma lanceolatumexon
Blg01695.2-exon-xfSc0000390-1570713199:2593..3308Blg01695.2-exon-xfSc0000390-1570713199:2593..3308Branchiostoma lanceolatumexon
Blg01695.2-exon-xfSc0000390-1570713199:5258..6156Blg01695.2-exon-xfSc0000390-1570713199:5258..6156Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0000390genomexfSc0000390:530..6156 +
Properties
Property NameValue
GeneIDBlg01695