Blg01693.4 (mRNA) - B. lanceolatum

Overview
NameBlg01693.4
Unique NameBlg01693.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000168:215134..219628+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01693.4 ID=Blg01693.4|Name=Blg01693.4|organism=Branchiostoma lanceolatum|type=mRNA|length=4495bp|location=Sequence derived from alignment at Sc0000168:215134..219628+ (Branchiostoma lanceolatum)
GACAGCATAACTTGAGAAGTTGTGGATGGATCTTTATGATAGGTGGGTAG AGTTTGGGCAAACAAGGGTCAAGGTCAACAATGGGCATCCTAATGGCATT TTGTCTTTCTCCTGTCTGATTTTGTAATGGATCATCCAAAAACATTTGTG TGCTAAAATGAGCCAATAGTAAGAAGAGCTTTGGGCAAAGTTTATACTAT GTGTATCTGTGTGAAATTTCAATTCTGGTAGAAATATGAAGCAGGTTGTT TGTTTATTTTCCTCCTCCAGGGTATCTAGCACAGAGTCCTACTTCCTAAG TGAGGCCTTGTATGCGCCTGAGAGTCAGCTGGAAAACAAAAGACTGATCA CCTTACATGTCCTGACACTGTCAGGGTCTAGTCATACAACACACGACGAA ATAGAGCCAGAGGTGAAGAGAAGGAGGACGGATCACCAGACACAGTGTGA AGCAGAAAAACATGATGGCACAGCCCAGAACCTCTGTAAAGACACAGACA CTCTAAGTCATGCCAAATATACACATGATGCTGTACAACAGAGAAGTGAA GAGTGTATACCTGAAGATTTTGATGTTGCAAACAGAAAGATCATGTTGGA GATACTTAGCAGTGTGAGAAAGAGCAGTGCAATGATTCTTGACATCGATC TGGATTTCTTCTCAACCCAGAATCCATTTCAGGACCTTTTCACAGATGTG AGTATTTGTGGTAGTTTATACTCAAATGAAACATCAATGTCTTTTAAACA TTTTGTGATGTCATGTTTTACTGTTTTTAAAAAGATCATGTTTTACCAAT GTTTTGCAATACCTGATAAATGTATACCATTTGGATAATTAAATTTTTTT TCCTTTTGTTGTATCATCTTAATTTTACCAGGAACAGTTTAAAATCATCC ATAAACTGTACAATTTTGAGAGACCAAGCGGCGCTGATGAGGATGCCCTC CTCACGTACACAGAGGGGAGACATCAGCTCTTGGAACAGATGGAAGACAT CTGCACTGACCTTCAGAATGGGACAGAACTGAGGGACATTGAGTGTGATA CCAGCAGGTCATTTGTGGAAGTTGTCATTTGAAACTACTGATTTTTCCGT TCAAAATGGTGTTTCTATTTGTTTTGAGAAAGTCCCTCTTTTAGAATGGG AAAGATAAGTTTGCTCCTTGTGAGCTAAGATAAAACATCTCATCACACGA GCCTTCTTTCATACATACCAAATACTACTTATTCACATCTAATAGTATAC TACATGTATAACAAATGGAAATTCTCTCTGCTATTTTGTTAATTGATTTC TGATTTTTTCTGCACATAATTTACAAAAGAATACTTAGTATATACATGAA CATTTTATGTATATGCAGTACACATGTATTTCAACTTTCTGTTTGTATTT CTAGGAAGGAGCTCCTAACAACTCTTGTGAATAGTATGAGGGAAACATTT GAGGACAACCTTGACTTTGAACTGGTGCGTGTTCAAATTTATTTCTCAGT CAGAGTGCCTCAGTCTGAAGCTATGTGTTAAAATGCATGTTTAAGCATTT AGGATCATCATATTAAGACAGAAGTTGAGCTGGTAAAGCTGTTAACTACT AGTTAGAATAGACTACCAAATACTGGGAAACATTGCATTACAGGGTCTGA ATTGTTCATCTTCCTTGTTGGAATTCATCTTATAAGCGTTTTCTAAGGAA AGTGCCATAGCTGAAAATTGGATGGTATTTCAGCTACACAAGGCTTGTTA ATTTTTCCCATCTTTCTTTTTCTCCTTGAAATGACCCCAGATCCACCTGG CTGGCTGTACCTGTGATGATACAGAGTTACCACATCATGTCAGCTCTCAG GAGGAGATCACAAACCATACCGCTGCCATGGAAACCATGCTGTCCTGCCT CCCCACACCTACTCTTGTCACTGTAGCAAGGTCAGATGAACCTTTAATGG TCTCATTTATGAGTTATTTTGTTACATTGGGGCTAGTGCAAAAATGTGTG TCTTACTTTGTCGCTTTTCAAATGAACCTACAGGAAATGCACCGATATCA TTCATTGTATGTGTTACATTTGCCCTACATCATATACAAAATTTGCCAAC AACCTCAACACACACAACCCCATTTTATGGTACATGTAGTTACAAATTGA ACTTAGCTACACCCCACGAGAGGCACTTTTGTGCAGCCAGGGTACAATTG CACCACTCAAAACCCAGGACTGTGCACCTCTGCGCTCTGCCCTAGTGCGA GGCTGCCGAAAATTACCTGCTAATTTCTTCAGTTACAGACAAGCTTTCAC CACAGATAAGTTTAGCAAATTAAAAAGAAATTTCATATAGTAGGTGTCTG CTATAAACATTCGTTCATACAGCCATCTTGCTCTTCGAACGGGTTTCTTT TACCCACTCGGAGTAATATATCAACGAAACCTTTTACAACATTTCATGGA CTACAATCATCACACTCAGTCTTTTTAATAAAACATTTATTTACCAACTA TACATAGAATTTCAATGACACATCCTTAACCTTGTCATTATTTCTCTATG TCATTTGTTCAACATTAAACAAAAACAGTGTTAGAACTTAGTTATTATTT AGATAAGATGTGACAAAACACTAACCCACAAATATACTCTCCACATATAC ATGAAAAAATAAAATAGCACACATTATTATCTCAGTGAACAATTCTGTTA CCAACATGAGGTCTGAAATACATTTTACTTCACCATGTACATTGTACCCT TCTCTTTTCTCCCACAGATCCTCTGATGATGATTACTGCCCAAAATCTCA AGTAGAAAGTATCCAAGAGAAGGTTTTAGAATGTCTTGAGTATCTATATG CTGACATTCATGTACAGCTAGAATATCTCCAACAGGATTAAGAATACATC ATTTTTATCCTTTGAGGTAGTATCATACTGGCAATGACTTGGCTTACAAA TCAAAGATCATCACAGTCTACTCTGTTTTCAGTTTCCAATTTTTCAGAGA CAACCATAGAAGGTTACCAAAAGTGATGAGAAACAAGAAGCTTTTTCTCA GAGCCACAATAAGCGCCAGCAGTATAGTAAGGATGAAAGAGCCAATGATA GCAAAGATGTCCAACATGTAACGTTGGTACCACGGGAGGTTGAAGACCTG AGGGCGCATGTGATCGCCGCCGTTGTTGCGGAGGACGTGCTCGATCCAGA ACACGGCCCGGTCGACTGGAGGGAGGNATCCAGAACACGGCACGGTCGAC TGGAGGGAGGGGCTGGTCGCGATGGATCCTGGAGTAGTGGTCAATAGTGG TCTTGTACCTGTGTCAGGAAAAATGTACCGTAATTATGATAGAACAGACT GCTATTACATGTACACAAAGTTGCTTGACGGATTGTTCGCTGAAAAATAC AAAATGTACATGTATGATTCAAGCTTTTACTGGTCTTTTGAAGTCTTTTA TATATCTATCGAGATTTACCACATTTGTGGAAAGATTGACATGATAGGTG ATTATCATACTTTCAAGATGCCCAGATTGTAAGCTTTGATCCACTCTTTT CGGTGTAAAGTGCCTTTCCCAGGGGCACAACATTGGGGCTTGCTTGCGTT GGGTTTCGAACCAAAAACCTTTAGAATCTTTAAGTCAACATCCCTAACCA CAAGACATCTTGCCACTTTACAGACCACTTTGCCACCTTGTGCCAGTTGA TTCAGCATAATGAGAGTCAGCTAAGGCTATGTTTGGGTGCTCAAGAGGTT GAACTGTGTGTTTGTGCTTACTGTTTGTCCTGGATGACTTTGGTGACAGC TGCAGACAGGTGTTCAGGCCGGAGGTTCCAGATGTCCAGTGTTATCCCCA TACCCTTCCCCGTCATGCGAGCCATGTTGTCGAACTGGTCGGCGAACATG GGCAGTCCGACCACAGGCACAGCGTGGTACAGCGCCTCGTACAGGCCGTT GATTCCCGCGTGGGTCACGAAGGCCTTGGTGTGAGGGTGGGCTGTGGTGA ACATGGGATAGACAAGTAAGTCCCTGTGGACTTATTGTAGTCATTAATTT GATTTGATATTAGTTCTCATGATATACACCTCATCTGTCAGATAGTGTAC TAAAGTTATTGAGAAAGACAATGTTATCACACCTGTCATTCATCAGCATA GTTTACGCATTTTTTGCTGCTATGAATATATATATATTTACATATTTATA TATGGAATATCTTGTTTTACAATTTGTACTTTTGAATTAGATGGTATACA ATTATACATAAAATATTGCAATTGGTAACAAATTTAGAAGCCTGGGTTTA ATATTTCCTTTAGGTTACATTCTGCTGACATCCCGTTTGCAAGTGTTAAG TACTTGAAATGAATCCAGATACTTTTATCTCAACCTCTTTTTACGTACTA GTCTGGACGCCGGCCTTGTTAGCTTCAGCTCGCTTCCACCGATCCCTTCA GACTAAAGCTACATGTAGCAAGACTGGCATCTAGCCTATTTACGC

Coding sequence (CDS) from alignment at Sc0000168:215134..219628+

>Blg01693.4 ID=Blg01693.4|Name=Blg01693.4|organism=Branchiostoma lanceolatum|type=CDS|length=954bp|location=Sequence derived from alignment at Sc0000168:215134..219628+ (Branchiostoma lanceolatum)
ATGGATCTTTATGATAGGGTATCTAGCACAGAGTCCTACTTCCTAAGTGA
GGCCTTGTATGCGCCTGAGAGTCAGCTGGAAAACAAAAGACTGATCACCT
TACATGTCCTGACACTGTCAGGGTCTAGTCATACAACACACGACGAAATA
GAGCCAGAGGTGAAGAGAAGGAGGACGGATCACCAGACACAGTGTGAAGC
AGAAAAACATGATGGCACAGCCCAGAACCTCTGTAAAGACACAGACACTC
TAAGTCATGCCAAATATACACATGATGCTGTACAACAGAGAAGTGAAGAG
TGTATACCTGAAGATTTTGATGTTGCAAACAGAAAGATCATGTTGGAGAT
ACTTAGCAGTGTGAGAAAGAGCAGTGCAATGATTCTTGACATCGATCTGG
ATTTCTTCTCAACCCAGAATCCATTTCAGGACCTTTTCACAGATGAACAG
TTTAAAATCATCCATAAACTGTACAATTTTGAGAGACCAAGCGGCGCTGA
TGAGGATGCCCTCCTCACGTACACAGAGGGGAGACATCAGCTCTTGGAAC
AGATGGAAGACATCTGCACTGACCTTCAGAATGGGACAGAACTGAGGGAC
ATTGAGTGTGATACCAGCAGGAAGGAGCTCCTAACAACTCTTGTGAATAG
TATGAGGGAAACATTTGAGGACAACCTTGACTTTGAACTGATCCACCTGG
CTGGCTGTACCTGTGATGATACAGAGTTACCACATCATGTCAGCTCTCAG
GAGGAGATCACAAACCATACCGCTGCCATGGAAACCATGCTGTCCTGCCT
CCCCACACCTACTCTTGTCACTGTAGCAAGATCCTCTGATGATGATTACT
GCCCAAAATCTCAAGTAGAAAGTATCCAAGAGAAGGTTTTAGAATGTCTT
GAGTATCTATATGCTGACATTCATGTACAGCTAGAATATCTCCAACAGGA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01693.4Blg01693.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01693.4-exon-Sc0000168-1570713199:215134..215175Blg01693.4-exon-Sc0000168-1570713199:215134..215175Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:215404..215830Blg01693.4-exon-Sc0000168-1570713199:215404..215830Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:216015..216190Blg01693.4-exon-Sc0000168-1570713199:216015..216190Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:216538..216607Blg01693.4-exon-Sc0000168-1570713199:216538..216607Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:216924..217063Blg01693.4-exon-Sc0000168-1570713199:216924..217063Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:217901..219169Blg01693.4-exon-Sc0000168-1570713199:217901..219169Branchiostoma lanceolatumexon
Blg01693.4-exon-Sc0000168-1570713199:219197..219628Blg01693.4-exon-Sc0000168-1570713199:219197..219628Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000168genomeSc0000168:215134..219628 +
Properties
Property NameValue
GeneIDBlg01693