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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:213706..218149+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01693.3 ID=Blg01693.3|Name=Blg01693.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4444bp|location=Sequence derived from alignment at Sc0000168:213706..218149+ (Branchiostoma lanceolatum)
GTGTTCAAAATGGCGGACAAATTAAAGTTTTGGAAGACGATATTTTTCCC
AATTTAACTCATTTTACATTTTAGGGACCTTTCTTCTCATTTGTTGGATT
TATGTGACCCAGATGTAATGGCAGAAGCTTGCGAAACGCTGAAGAAGTAC
AAAACAACACCTGTTTGGATCGTAGAGGACCATAATGACGTGAGTACTTC
TGCCACTTTCCCCCTCCCATGATCGGTGGACTAACAAAATTTATTTGTAA
ATTTTCTACATCTACATCTATACAATACTAGACCCCCCATGCAGCATAGC
TTCTAGGACAACTTTTACTTTGAGAAAGACGATTTCAAGTCAACCTGACC
AAACTGACTCAACTAACATTATATTATTTGGACCTGATGTAGCTGTAGTG
GAGAAGGATACTCATAATCTAAGTTTAACTTTAACTTTAAACGTATGCAT
AAATTCTCGAGCTAATTTCTAGCTGCCATGACATTATTCTGAGGCATGTA
ATATCTGTACTGGCTGTAAGTAAACCAAATGTTATTCCAGGCACTTTACT
ATATCTACCGTGCGATCGGCTCCCACCACCTGCCTCTCCATGGTGTCACC
ATGGTGCATCTGGACTCCCATCCTGACATGCTCATCCCATGGAAGATGTC
TGCTGACACCGTCTTCGACAGAGAGGAATTATTCAAGTATGAGTGTGCAT
CAACTACATATGCATAATTTTTTGTACTATATCTGTGGCGACTCCTGCAG
GGTGTACAGTTTCTATTTGTAGCTTAACCTTAACTAGTATATATTGCAAA
TGTTACTGTTACATATGTATAAAACTACGAATAGAATATGCCTTTCAAGA
GTCACCACGGCTACATGCACTAGTGTATGTATTGTTACTAAGCGCCCAAG
GGAGTGGAGGCTCCGAGCAAGGGTGGTACATGGATTTTCCCCCTTTCACT
GTGTGGAGTTGTAGAAAATGGGGTATTCTGAGGCTTCTTGAGGAGGGAAA
TTACTCACTGTCAGGCGGCTCACAGTTGAAGTCTAGTGACCTACTAGTAG
TAGCATCTCTGGTCAATCTGAATTTTATGCTTGTCAGAGGATCTCCTCCC
CTAGGTAATTAGGGGGATCATGGTTATAGCATGGGGGCGCAGAACCCCTC
TTCAGAAAAAAACAACTGACTTAGACCTGTATTATACTCTTTTCCAGTAC
CTTGAGTATAGAGAACTGGATTCTCCCTGCAGCCTATGCTGGTCACCTGG
ACTGTGTGGTGTGGGTGAAACCACCCTGGGCTGAACAGATACAGGAACAG
TCAGTCTCATTTTACATCGGGAAGCACAGGACATCAAGAACCATCAGGTA
AGACTGTCTTGTTCGTGCATTATTACCTTTGTCAAGAAGGTTATTGGTGC
TGTGTGTTCATCTGTTTGTGTGTTTGTGGACAGCATAACTTGAGAAGTTG
TGGATGGATCTTTATGATAGGTGGGTAGAGTTTGGGCAAACAAGGGTCAA
GGTCAACAATGGGCATCCTAATGGCATTTTGTCTTTCTCCTGTCTGATTT
TGTAATGGATCATCCAAAAACATTTGTGTGCTAAAATGAGCCAATAGTAA
GAAGAGCTTTGGGCAAAGTTTATACTATGTGTATCTGTGTGAAATTTCAA
TTCTGGTAGAAATATGAAGCAGGTTGTTTGTTTATTTTCCTCCTCCAGGG
TATCTAGCACAGAGTCCTACTTCCTAAGTGAGGCCTTGTATGCGCCTGAG
AGTCAGCTGGAAAACAAAAGACTGATCACCTTACATGTCCTGACACTGTC
AGGGTCTAGTCATACAACACACGACGAAATAGAGCCAGAGGTGAAGAGAA
GGAGGACGGATCACCAGACACAGTGTGAAGCAGAAAAACATGATGGCACA
GCCCAGAACCTCTGTAAAGACACAGACACTCTAAGTCATGCCAAATATAC
ACATGATGCTGTACAACAGAGAAGTGAAGAGTGTATACCTGAAGATTTTG
ATGTTGCAAACAGAAAGATCATGTTGGAGATACTTAGCAGTGTGAGAAAG
AGCAGTGCAATGATTCTTGACATCGATCTGGATTTCTTCTCAACCCAGAA
TCCATTTCAGGACCTTTTCACAGATGTGAGTATTTGTGGTAGTTTATACT
CAAATGAAACATCAATGTCTTTTAAACATTTTGTGATGTCATGTTTTACT
GTTTTTAAAAAGATCATGTTTTACCAATGTTTTGCAATACCTGATAAATG
TATACCATTTGGATAATTAAATTTTTTTTCCTTTTGTTGTATCATCTTAA
TTTTACCAGGAACAGTTTAAAATCATCCATAAACTGTACAATTTTGAGAG
ACCAAGCGGCGCTGATGAGGATGCCCTCCTCACGTACACAGAGGGGAGAC
ATCAGCTCTTGGAACAGATGGAAGACATCTGCACTGACCTTCAGAATGGG
ACAGAACTGAGGGACATTGAGTGTGATACCAGCAGGTCATTTGTGGAAGT
TGTCATTTGAAACTACTGATTTTTCCGTTCAAAATGGTGTTTCTATTTGT
TTTGAGAAAGTCCCTCTTTTAGAATGGGAAAGATAAGTTTGCTCCTTGTG
AGCTAAGATAAAACATCTCATCACACGAGCCTTCTTTCATACATACCAAA
TACTACTTATTCACATCTAATAGTATACTACATGTATAACAAATGGAAAT
TCTCTCTGCTATTTTGTTAATTGATTTCTGATTTTTTCTGCACATAATTT
ACAAAAGAATACTTAGTATATACATGAACATTTTATGTATATGCAGTACA
CATGTATTTCAACTTTCTGTTTGTATTTCTAGGAAGGAGCTCCTAACAAC
TCTTGTGAATAGTATGAGGGAAACATTTGAGGACAACCTTGACTTTGAAC
TGGTGCGTGTTCAAATTTATTTCTCAGTCAGAGTGCCTCAGTCTGAAGCT
ATGTGTTAAAATGCATGTTTAAGCATTTAGGATCATCATATTAAGACAGA
AGTTGAGCTGGTAAAGCTGTTAACTACTAGTTAGAATAGACTACCAAATA
CTGGGAAACATTGCATTACAGGGTCTGAATTGTTCATCTTCCTTGTTGGA
ATTCATCTTATAAGCGTTTTCTAAGGAAAGTGCCATAGCTGAAAATTGGA
TGGTATTTCAGCTACACAAGGCTTGTTAATTTTTCCCATCTTTCTTTTTC
TCCTTGAAATGACCCCAGATCCACCTGGCTGGCTGTACCTGTGATGATAC
AGAGTTACCACATCATGTCAGCTCTCAGGAGGAGATCACAAACCATACCG
CTGCCATGGAAACCATGCTGTCCTGCCTCCCCACACCTACTCTTGTCACT
GTAGCAAGGTCAGATGAACCTTTAATGGTCTCATTTATGAGTTATTTTGT
TACATTGGGGCTAGTGCAAAAATGTGTGTCTTACTTTGTCGCTTTTCAAA
TGAACCTACAGGAAATGCACCGATATCATTCATTGTATGTGTTACATTTG
CCCTACATCATATACAAAATTTGCCAACAACCTCAACACACACAACCCCA
TTTTATGGTACATGTAGTTACAAATTGAACTTAGCTACACCCCACGAGAG
GCACTTTTGTGCAGCCAGGGTACAATTGCACCACTCAAAACCCAGGACTG
TGCACCTCTGCGCTCTGCCCTAGTGCGAGGCTGCCGAAAATTACCTGCTA
ATTTCTTCAGTTACAGACAAGCTTTCACCACAGATAAGTTTAGCAAATTA
AAAAGAAATTTCATATAGTAGGTGTCTGCTATAAACATTCGTTCATACAG
CCATCTTGCTCTTCGAACGGGTTTCTTTTACCCACTCGGAGTAATATATC
AACGAAACCTTTTACAACATTTCATGGACTACAATCATCACACTCAGTCT
TTTTAATAAAACATTTATTTACCAACTATACATAGAATTTCAATGACACA
TCCTTAACCTTGTCATTATTTCTCTATGTCATTTGTTCAACATTAAACAA
AAACAGTGTTAGAACTTAGTTATTATTTAGATAAGATGTGACAAAACACT
AACCCACAAATATACTCTCCACATATACATGAAAAAATAAAATAGCACAC
ATTATTATCTCAGTGAACAATTCTGTTACCAACATGAGGTCTGAAATACA
TTTTACTTCACCATGTACATTGTACCCTTCTCTTTTCTCCCACAGATCCT
CTGATGATGATTACTGCCCAAAATCTCAAGTAGAAAGTATCCAAGAGAAG
GTTTTAGAATGTCTTGAGTATCTATATGCTGACATTCATGTACAGCTAGA
ATATCTCCAACAGGATTAAGAATACATCATTTTTATCCTTTGAGGTAGTA
TCATACTGGCAATGACTTGGCTTACAAATCAAAGATCATCACAGTCTACT
CTGTTTTCAGTTTCCAATTTTTCAGAGACAACCATAGAAGGTTA Coding sequence (CDS) from alignment at Sc0000168:213706..218149+ >Blg01693.3 ID=Blg01693.3|Name=Blg01693.3|organism=Branchiostoma lanceolatum|type=CDS|length=1401bp|location=Sequence derived from alignment at Sc0000168:213706..218149+ (Branchiostoma lanceolatum)
ATGGCAGAAGCTTGCGAAACGCTGAAGAAGTACAAAACAACACCTGTTTG
GATCGTAGAGGACCATAATGACGCACTTTACTATATCTACCGTGCGATCG
GCTCCCACCACCTGCCTCTCCATGGTGTCACCATGGTGCATCTGGACTCC
CATCCTGACATGCTCATCCCATGGAAGATGTCTGCTGACACCGTCTTCGA
CAGAGAGGAATTATTCAATACCTTGAGTATAGAGAACTGGATTCTCCCTG
CAGCCTATGCTGGTCACCTGGACTGTGTGGTGTGGGTGAAACCACCCTGG
GCTGAACAGATACAGGAACAGTCAGTCTCATTTTACATCGGGAAGCACAG
GACATCAAGAACCATCAGGGTATCTAGCACAGAGTCCTACTTCCTAAGTG
AGGCCTTGTATGCGCCTGAGAGTCAGCTGGAAAACAAAAGACTGATCACC
TTACATGTCCTGACACTGTCAGGGTCTAGTCATACAACACACGACGAAAT
AGAGCCAGAGGTGAAGAGAAGGAGGACGGATCACCAGACACAGTGTGAAG
CAGAAAAACATGATGGCACAGCCCAGAACCTCTGTAAAGACACAGACACT
CTAAGTCATGCCAAATATACACATGATGCTGTACAACAGAGAAGTGAAGA
GTGTATACCTGAAGATTTTGATGTTGCAAACAGAAAGATCATGTTGGAGA
TACTTAGCAGTGTGAGAAAGAGCAGTGCAATGATTCTTGACATCGATCTG
GATTTCTTCTCAACCCAGAATCCATTTCAGGACCTTTTCACAGATGAACA
GTTTAAAATCATCCATAAACTGTACAATTTTGAGAGACCAAGCGGCGCTG
ATGAGGATGCCCTCCTCACGTACACAGAGGGGAGACATCAGCTCTTGGAA
CAGATGGAAGACATCTGCACTGACCTTCAGAATGGGACAGAACTGAGGGA
CATTGAGTGTGATACCAGCAGGAAGGAGCTCCTAACAACTCTTGTGAATA
GTATGAGGGAAACATTTGAGGACAACCTTGACTTTGAACTGATCCACCTG
GCTGGCTGTACCTGTGATGATACAGAGTTACCACATCATGTCAGCTCTCA
GGAGGAGATCACAAACCATACCGCTGCCATGGAAACCATGCTGTCCTGCC
TCCCCACACCTACTCTTGTCACTGTAGCAAGGTCAGATGAACCTTTAATG
GTCTCATTTATGAGTTATTTTGTTACATTGGGGCTAGTGCAAAAATGTGT
GTCTTACTTTGTCGCTTTTCAAATGAACCTACAGGAAATGCACCGATATC
ATTCATTGTATGTGTTACATTTGCCCTACATCATATACAAAATTTGCCAA
CAACCTCAACACACACAACCCCATTTTATGGTACATGTAGTTACAAATTG
A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01693.3-exon-Sc0000168-1570713199:213706..213894 | Blg01693.3-exon-Sc0000168-1570713199:213706..213894 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:214246..214391 | Blg01693.3-exon-Sc0000168-1570713199:214246..214391 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:214903..215052 | Blg01693.3-exon-Sc0000168-1570713199:214903..215052 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:215404..215830 | Blg01693.3-exon-Sc0000168-1570713199:215404..215830 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:216015..216190 | Blg01693.3-exon-Sc0000168-1570713199:216015..216190 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:216538..216607 | Blg01693.3-exon-Sc0000168-1570713199:216538..216607 | Branchiostoma lanceolatum | exon |
| Blg01693.3-exon-Sc0000168-1570713199:216924..218149 | Blg01693.3-exon-Sc0000168-1570713199:216924..218149 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:213706..218149 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01693 |
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