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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:275469..282421+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01675.5 ID=Blg01675.5|Name=Blg01675.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6953bp|location=Sequence derived from alignment at Sc0000168:275469..282421+ (Branchiostoma lanceolatum)
GGAGTCCCGCCTCTATGCAAACAGTTCGCTGTTTGCGCTGCTATTTTATC
TTTGTCTGCTCTCTGTCACGAGTTGCGATGTTTACGTTCTGTAACTGGTT
ATGTGGGTCACGTGCGATCCCCGCGATGTGACGCTCTTACATATTCATAA
GTCTCACACAGAGCAAGAAACAGTCACTTGTCACAGATTTCTTGGACTGT
AAACTTTAGGTCGTTGATTCCTTCTGATTGTGTGGATACAATTTTGCTTA
AAGCTAAGAAGTGTTATCGAGGTTAATTGCATATAAAAGGGATGTATGCA
AATATAATCGATGTTTATTTTGCCTCAGGGAGTAACAGACATTATCCTGT
ACATTATGTGTGTCTTCCACTCGTTAATAGACCAGTCTGACCACTTGTCT
GTCTTTATCCGTACAGGTGGTACCGTAGGCTCCTCCCACAAGCACCCCAC
CGCCGCCGTAAGTTGTCCGACGCTTGTGGTTGGACGTCACTCGGTCAGGA
CCCACAGTTGAAGAACGTACCGGCCAGGATTTAGGACAGTCGTCTGACCA
ACATGGCACCGGACATCCAAGGCAACGGAGCTACGGAGAAGACTCCGTCG
ATGGAGAACATGGACGTCGGGGACGGAGACGGAGAAGAGTCGGTGAAGAT
GAAGAAGAGGGTGACCCTATGGAACGGTGTCGCCATCATCGTCGGCACGA
TCATCGGCTCGGGTATCTTCGTGTCCCCGGTCGGCGTGATCGCGAACTGT
GGGTCGGTGGGACTGTCGGTGATCGTGTGGGCCATCTGCGGCGTGGTCAC
CATCATCGGCGCACTGTGCTTCGCCGAGCTCGGCACATGTATCCCCAAGT
CAGGAGGGGACTACATCTACGTCTTGGAGGCGTTCGGGGACGCCTTCGAG
GGCTGCGCCGGGCGGTGCTCGGGGGCCGGGGCGCAGAAGTTCTGCCGACA
CATGGGTAAACTGTTGGCCTTCCTCTGCCTATGGATCAATCTGCTCATCA
TCAGGCCCACCACACAGTCCATCGTGGCGCTCACCTTCGCCAACTACATC
GTCAAACCGTTCTTCCCGACCTGCGACGGGCCCGACTCTGCCATCCGACT
CCTGGCTGTTCTGTGTCTCGGTAAGTGTGCGGACTTTTCTCATCGTCGTT
CTCTTGACATACCTGGTATATCATAATGTAACCCATATTCTCGGCCCTAC
TCTGTTTTAATAGAAATCACATGCTGTGATTTTGCGATACGTGTTAACAA
CTGGCCTACGTTTTTGGTAACGCAGCACGATTTATGGTGGAAGGGGAGAG
GGGAAGAGACGTGCATTTTTGAAACCATGTGACAAGGCCATGACCGTTCT
GTGTATAGTGACTTAGTGTTGTATGTCGGCATGTGATGTTGTTGCGATTT
TGGAGTTCATTATGTTTGATCTCCCTGCTTAGACTTGCAATTCTTTCCCT
AAAAAAAAGAACACAATTTATTTCGATGAATTAGCATTACTGTGATCAAT
AAATGCTGTCCAGTCCACTCAGCCCATATTAATGCATGTCCCTTACGCCC
TATAGTGTATGTTCATGTACCTGTAACTATACACCTCGTGATAGTCACGA
GAGTGGGTAGACCTTTTAATTGGGCGTCTTTGTGGCAGAACGGCACTGTT
ACGCACTGCGTGAGACCACTGTATAACATTGGGGCCTTTCTTTATTGTAG
AAACCTTCTTGCTGACGTATATAATAGATATACTATACAGAGATACTATA
ATACTGTAATCACTTGTAGCCGAAGAAATAGTCTATGCAAGACAAAACAT
ATAATCCGCTTTGAAGTCGTACATGGATTTTAGACAAATACGGACATACA
TACAGACACTCTCACTGTTTGCTTGCTTCCGAATCCCTTTCCATCAACAT
TACAATTAACAAAACATACATTCACAAAAACATGAGAAGAAATAAGCCGC
TGGACCTGTTTTTCTCGACCCCGCCCACTGTTTGGTAAACCATAGCCCTC
CGTGTTTCTATGTTTGTATTCTGCACCGCTGGAGGGAATCCCCAAATCCG
GCACCAACCGGTCGGTGATACTGTAAAATGGGAAATGTTCGCGGGAATGT
AACTTTGCGGTAGGGAGAAAATGGAAAATGTGTTCGCTGTGGTTTTTAAG
TTCGCGGTTGAAACGAGGGGAGAAATGTGGGCAGATGATGTTCGCGATGA
AGACGTCGCCGCGAAAACCGCGAATATAAAACCACCGCGAACATTTCGCC
CTTTACAGTATTAGTACTTATCTGACCGTAACCACTCCCACCAGTCGACA
CCATACCATCCTGTCAGTGTTGTCCATCTGGCGTCCTGCCAGCATATGGC
TAGATTAGATACAGTAACACGTGGATTTGTACTATCAGAGAAAAGGCTAG
CTAGTCTCTCTACCAGACTGACTACGCCCACTATATTTGTTTTTTGTTTG
CAGGCGCAAGGGGGAAATGTTAACCTTTCCGTGGACACCCCTGGCCATTT
ATTTTCCCTTTGTTGCCGAATTCTACGATCCGTACCCCCGTAGGAAGTCC
AGGTGGAGGCTAGGGAAAAGCCTTTTTTTAACGGTTAAACGACTAGCTTG
CATAGCTTGTGAATACTCGGGTACATTACCGAGTATTATTATTAAAGGCC
TTACTTCTATGCCTCAAATATCTTACAGCTAGCCTGTGTCTCATTTGCAT
ATATTATACGGATTATCAATCACACGTCCGTAGGGGAAGGATATCGAATT
ACTGCAGCGGAATCCTTTTAGCTCTCCTTGAATTATCATTTTTATTATCG
CGGGGATGATTATTTATGTGAATTTTTCAGGAGATGGATTTAGTCGACTA
ATTGACCTGTCCTTTGATGATATCACCAATGCATCCGTTTATCAAAGACA
GATGCAAAATTTAGAATAAGGGACATCGTGTGTGTTGAGATGCCTATATA
ACAGAGACGTTCAGACTTCATTATACTCATCTAAAAAAACCATTCCATAT
GGTTCATTGAATCATGAATGGGCCGGCCACGCCCTGGCCTTGGTGCTAAC
AAACGAGCTTCTAGCGACACCCCTTGGTGTCGGTGGGAACTGCAGAATTG
GCGCACGTCAGCATCCTTCCTATCTTTTGATTATTGTACTACCTGGTGCC
CATCGTACCCAAGTTCACTGATCAGTCTCCAGGAGAATAACTAAAATTGT
ATGATTAACTTTTTTTCAAATTGTGTCTGTTACTTGTAGTGACTTTGACG
TTCATCAACTGCGCCAGTGTCCGTGCCGCCACCCGTGTACAGGACATCTT
CACTGTGGCGAAAGTGTTGGCCCTCATTCTCATCATTATCTGCGGCTTTG
TACAGATAGGCAAAGGTTGGTACAATATTCTGTTATCCCCCTTTCTAATC
ACATTGCTTGAAACACGAATAGTTAAAGAAATAGGACCATTCAAACACCT
GTTCACCATGAAGAAGATACTCAGTATCTCAGGTATTCGTTATGCCTTGC
ATTGTTGCATTTTGTATGTCTCTGTGTCTGGATTATGCAGTGAGTGTGTT
TCCCTTACCATGTCCCAATCTATTTTAATCTAAACTGTTCGTACTCAGGT
GAGGCAGAGTACCTTAGGCCAGACAAGGCTTTTGAAGGCACCACAAGTGA
CGTCGGCTCTATAGCCGTGGGTTTCTACTCCGGACTCTTCGCCTATGGAG
GCTGGTGAGTTGACGTATTTTAAAGAAACGTCTATCATGGAGAAACGGAA
GCTTCATGTATTGCGAAATGTTACATTTGATTGAATTGTTGGGAAAAGTT
TAATTTATCATTAAAATCGTTTTGTCTTTTGTAGGAACTACCTCAATTTC
GTCACAGAAGAGCTGCAGAACCCATTTGTGTAAGTTATTTTCTTTTTTGC
ATTATGAACAAATTTGTTATTTCCAGGCTGTGCGATTGGTATCTTTGGAT
AAACAGGTGTGAAACTTTTGTCCCAATCAAAAGCGATTTTACAACGTCGT
CTCTTTTTTCCTTCAGAAATCTTCCAAGGGCCATCATCATTGGCCTATCG
CTGGTGACGACAGTCTACGTTTTGACCAATATCGCGTACTTCACCGTGTT
GTCGCCCGTCCAGATGCTCGCAGCCCCCGCCGTAGCCGTCGTGAGTTTCG
CTCATACTCATTTGTATTTCATGATCAATCTGCAGCAAACAGATGATCTG
TTATGTTTTCATCTCGGTAGTCATATTTTCTTTTACAAGTCGAAATGCGT
CGTTCTCAATGTAATAGGCTGTGATAGTTGAGCGAGCACTTCGAGCATAT
CAGAGCGTTCGTTGTTTTGAATTTTTGACCGTTATTTCCCATGAAGACGT
TCGGCGACCAACTCCTCGGTGTGATGTCCTGGATCATTCCCGTAGCCGTG
GCCCTGTCTTGCTTCGGAGGGGTCAATGGCTCTCTTTTCACTTCAGGAAG
GTCAGTGATCATAACCATTTAGTCGATTTCAATCGGAAGTTGAGGCGCCT
ATTTGTTGATGCGTCAGGTACCGACCTTGTTGTATATCCCCTTGGTATCT
TGCTAGAGACCGTACATATTTACAGGTTTGCAGTAGCAAGACCTGTCTTG
TTGGAGACATTTTGCGACAATACCCACACCTCTAGTATTATCAGTGCTAA
AAGTGCTGTCGACGTTCTGCAGGTTGTTCTTTGTGGGTGCACGTGAAGGA
CATCTCCCTGACGTCATGGCCATGATCCACACGAAGAGTCTGACACCAGT
ACCGGCTCTCATTTTCACGGTGAGTTTTACAAAAAAAATCTATATAACCG
GTAACACACCAGCTTCGCAGGCACGCGGCGCGACAACTGCAATCGTTGTT
TGAAGCTATCTAATAAGAATACCCCTACTGTCCTTGGTGGTAAGGAGTTC
CACTATACGATATATGTTATATATATGTTACCGTTTACGATTCAAACGAT
ATCTTGTTATTCATTCCTTATCTTATATCACATAACAGAAAAAAGCCCCC
GTTTTCCGTGGACTTATGATAACGTTGGTGAAGCGGTAGATAAAAAAGAA
AATAAAGTCTGATCAGGTCCGGTATTGACTATGAGATCTAAGCCATGTTT
TCGTTTCCTTTCAGTGCTCATTGTCGGTGATCATGTTGGTGTCAGACGAC
ATCTTCGTCCTAATCAACTACGTCAGCTACATCTGGTACCTGTGGTTCGG
TATCGCCATTGTCGGTATGATCATGTTAAGGTTCCGCAGACCCGACATGC
CGAGACCATACAAGGTAGGCGGACACGTTGTTACTTCTGTATAAAGCATT
GTTCTCACTGTGTGTGGTGTTTTGGGATCAGTGATAATGACTGTTACCTC
CGTGAAAACGGAGGTATAATAATCAGCCGGTGTGTTTGCTTGTTGTGCGA
CAGTAGTTATGTGAATATTGCAGGGTAGCAGTATCTAAGGCGCAAGCGGT
GTAATAGGATACTTGGAGAATTTCATTTGGGCCAATGGTGTTGTAGTTGA
GAGCCAGGATGACTCATGGCTAGGTGATTCAGGGTACCAACGTAAAGTTT
ATTTTCAATGTTTTCACATGAAGTTTTAGTGTTGCACAGAAAATGATAAT
CGTATTGGTGTTGTTTCCACAGGTTCCTCTCGCCCTCCCAATCATCTTCC
TGCTTGTCTGCATCTTCCTGGTGGTCTTCTCCTTCGTACAAATCCCGTAC
GAATGCCTCTTCGGCACCATCATCATGTTATCGGGCATCCCCTTCTACTT
CGTCGGCGTGTACTGGGAAAACAAACCGAAGTTCCTCACAAATTTCCTCG
GTAAGTTTCGTGAGACGTGTAGAGCTCTGTGTNGTGAGACGCGTAAAGCT
TTGTGTGTGCCATCACGATGCTTTAGGGCACGGTATTGCTGTAGTTTGCA
TTATCATAGGTGATCACAAAGCATGATAACATCACAGCTCCTCTAACCAT
TTCAAACCCTTACCGTTAACCCTGTTTTCCTCCAACACTAACAACAATAG
TTCTTTCCAGAGTATCTCGTTTGTTTCAGCTTGCACGCTCCATAAAAATA
GATTCTTTGCTTGTGAAAGTAGCTGTGCTCTCGTAATGTAATACTGTGTG
AAGTGTATCGTGTTGAGATGGCAATGTGTTGTTGTAATGTATATGAGTAT
ACTTAGTCTTGAAATATTGTCATTGTATGATATATGTTCTCCACAACCAC
GCAAGGCCAACATGCACGAGGCCCTGTGCTTTGACCACAGTATGTCTTAC
TGATACCACATCTAGGGTACGCATCTGATATCAAGTCACCATAAAATGGT
TCTAACATCCAAAACCAGTACTGCTTTTCCACAGTATATAACCCGTATCT
AACCCTACAAGTTTCATGTAGATTCACAGAGCATGGATAGTGCCCTCCCG
TGACTGGAGAGCATGGATGTTTCACAACATGAGTGGTATGCTCAACATTT
GCCCGTATTTTCTCCACTTTACCAATGGCATTGCAAGCAACGTCACTCAC
CTTCTATCTACGTACGTTCTTCTTCCAGAGTCCTTCACATACTACTGCCA
GATGACGCTAAGCGTCGTGCCGCAGCACACCTACGGCTGAGAAAGAATGC
GAACACCGACGGAGAAGAAACTCAAGACGCTACTATGTGGCCGTTGATTT
TGGGGTGATGGTGGTGGTGATGTGTGTTGTTCTAAATCTGTGTCCTTTTG
AGAAGTTCTTAGTTTATATAGCCTCCTGTAACTGTTTGTTCTTCTCAGTA
TCTGCTTGTCTGCTGTGGCCGTTGCTTTGAAGCTGAAGGAGATGCACACG
TTTTAACCGCATCTCCCTTTAATATAGCCTGGTAACCATTCTCAACGGGC
NACCATTATCAACGGGCCGAATTCGAGGTGTTTTACCGGCCCAGGTTCTT
CTACGCATTGGTCTTTTTCCTAATCTCCAAGCAGATCTGTCGGTGGAAAA
ATA Coding sequence (CDS) from alignment at Sc0000168:275469..282421+ >Blg01675.5 ID=Blg01675.5|Name=Blg01675.5|organism=Branchiostoma lanceolatum|type=CDS|length=1554bp|location=Sequence derived from alignment at Sc0000168:275469..282421+ (Branchiostoma lanceolatum)
ATGGCACCGGACATCCAAGGCAACGGAGCTACGGAGAAGACTCCGTCGAT
GGAGAACATGGACGTCGGGGACGGAGACGGAGAAGAGTCGGTGAAGATGA
AGAAGAGGGTGACCCTATGGAACGGTGTCGCCATCATCGTCGGCACGATC
ATCGGCTCGGGTATCTTCGTGTCCCCGGTCGGCGTGATCGCGAACTGTGG
GTCGGTGGGACTGTCGGTGATCGTGTGGGCCATCTGCGGCGTGGTCACCA
TCATCGGCGCACTGTGCTTCGCCGAGCTCGGCACATGTATCCCCAAGTCA
GGAGGGGACTACATCTACGTCTTGGAGGCGTTCGGGGACGCCTTCGAGGG
CTGCGCCGGGCGGTGCTCGGGGGCCGGGGCGCAGAAGTTCTGCCGACACA
TGGGTAAACTGTTGGCCTTCCTCTGCCTATGGATCAATCTGCTCATCATC
AGGCCCACCACACAGTCCATCGTGGCGCTCACCTTCGCCAACTACATCGT
CAAACCGTTCTTCCCGACCTGCGACGGGCCCGACTCTGCCATCCGACTCC
TGGCTGTTCTGTGTCTCGTGACTTTGACGTTCATCAACTGCGCCAGTGTC
CGTGCCGCCACCCGTGTACAGGACATCTTCACTGTGGCGAAAGTGTTGGC
CCTCATTCTCATCATTATCTGCGGCTTTGTACAGATAGGCAAAGGTGAGG
CAGAGTACCTTAGGCCAGACAAGGCTTTTGAAGGCACCACAAGTGACGTC
GGCTCTATAGCCGTGGGTTTCTACTCCGGACTCTTCGCCTATGGAGGCTG
GAACTACCTCAATTTCGTCACAGAAGAGCTGCAGAACCCATTTGTAAATC
TTCCAAGGGCCATCATCATTGGCCTATCGCTGGTGACGACAGTCTACGTT
TTGACCAATATCGCGTACTTCACCGTGTTGTCGCCCGTCCAGATGCTCGC
AGCCCCCGCCGTAGCCGTCACGTTCGGCGACCAACTCCTCGGTGTGATGT
CCTGGATCATTCCCGTAGCCGTGGCCCTGTCTTGCTTCGGAGGGGTCAAT
GGCTCTCTTTTCACTTCAGGAAGGTTGTTCTTTGTGGGTGCACGTGAAGG
ACATCTCCCTGACGTCATGGCCATGATCCACACGAAGAGTCTGACACCAG
TACCGGCTCTCATTTTCACGTGCTCATTGTCGGTGATCATGTTGGTGTCA
GACGACATCTTCGTCCTAATCAACTACGTCAGCTACATCTGGTACCTGTG
GTTCGGTATCGCCATTGTCGGTATGATCATGTTAAGGTTCCGCAGACCCG
ACATGCCGAGACCATACAAGGTTCCTCTCGCCCTCCCAATCATCTTCCTG
CTTGTCTGCATCTTCCTGGTGGTCTTCTCCTTCGTACAAATCCCGTACGA
ATGCCTCTTCGGCACCATCATCATGTTATCGGGCATCCCCTTCTACTTCG
TCGGCGTGTACTGGGAAAACAAACCGAAGTTCCTCACAAATTTCCTCGGT
AAGTTTCGTGAGACGTGTAGAGCTCTCTTTGTGTGTGCCATCACGATGCT
TTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01675.5-exon-Sc0000168-1570713199:275469..275565 | Blg01675.5-exon-Sc0000168-1570713199:275469..275565 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:275885..276588 | Blg01675.5-exon-Sc0000168-1570713199:275885..276588 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:278708..278833 | Blg01675.5-exon-Sc0000168-1570713199:278708..278833 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:279067..279172 | Blg01675.5-exon-Sc0000168-1570713199:279067..279172 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:279303..279347 | Blg01675.5-exon-Sc0000168-1570713199:279303..279347 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:279485..279608 | Blg01675.5-exon-Sc0000168-1570713199:279485..279608 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:279815..279918 | Blg01675.5-exon-Sc0000168-1570713199:279815..279918 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:280141..280237 | Blg01675.5-exon-Sc0000168-1570713199:280141..280237 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:280583..280732 | Blg01675.5-exon-Sc0000168-1570713199:280583..280732 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:281091..281296 | Blg01675.5-exon-Sc0000168-1570713199:281091..281296 | Branchiostoma lanceolatum | exon |
| Blg01675.5-exon-Sc0000168-1570713199:281317..282421 | Blg01675.5-exon-Sc0000168-1570713199:281317..282421 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:275469..282421 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01675 |
|
