|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:628784..636033+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01653.0 ID=Blg01653.0|Name=Blg01653.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7250bp|location=Sequence derived from alignment at Sc0000168:628784..636033+ (Branchiostoma lanceolatum)
GCCAGTAGAGAAAACACAGACCATGGCGGACAGGAAAATGACAGAAAAAC
TCGACTTTGGCGAAGACAAAGGTCAACGGTGGGTACACTACTTTGTTGAG
AATGACATGATGTTACGTAGATGGTCATTTGATGTTATAAGAACTCAAGT
GTAGGTCTTTGGAGGGAAAATCCAACGGTATTCTGGCAGCACCGAAATGG
CCGACATCATGAACTCAGAAAAACAATACTGCCAGGATACTATTTCCCCA
CTCCGAAGATCTGTTTAAAGATGATTGATGATTACTTAGTACCGTAGTTG
GGAACTGACGTCTAATTGAACGAGTGACGAAGCCACAATGGTAGGGAGGC
GGGACAGCCTGTTTGGCGGGGTCGGGTGGACGGAGGGGGATGGGGCTGGT
TGGTAATATTGCCGTTCAATCCTAGCCTGTACCTATTCTCCAAGCAGAGG
TTTCGGTCGTGTGGGGTAGTAGTGGCCGGGTTTTTTTTACGTCTGTGTCC
CGTAACGGGAGGCAGACGTAAAAAAAAAACGGCCACTACGACCCCACCGT
GACGACCGAAACCTCTGCTTGGAGAATAGCCTCTACCAGGCTCCGCCCGA
TCGCTGGGCCGGAACTTAGTAGTAGAAATCGGCCAAATAGGGTGAATAGT
ATGCCAGGGGTAGTCCGCTATACAGGGTGTCCATCGCCTATTGAGCTTCA
CTGCATAGCGGACTACCCCTGGCATACTATTCACTCTATTTGTACTATTT
CTGTGCCGATTTCTACTATTTGGGCCCAGCGATCGGGCGGAGCCTGGTAG
AGGCTAGTTCAATCCCCGGCCACGACATTATTACATGTAAGTTAGATGTT
TTCTTTTCAATATCCATCTTTTATCATTCTAGATAATCATTCTTGCTCAG
GAGGGTAAACTAGTTTATTTCAACACCATTTTACAGGATCATCCTCAGAG
ATAGACTTGGGGTTGATAATGTGTGGTGTAAATCACAAGATTGTCAAAGG
AACAATTTCCTGTCCATAGTGCGAAAAAAACTTATTTCCTGTCAAAAGTG
TAAGAAAAAAGTCTTATGATCAGGAACATCAGGCCTGTCAATAGTGCCAA
AAAATTGTCAACAGGAACATCCTGTCAATGGCCTCGATCAAATTGATAGA
AATGAAGGATTATTATCATTAGCACTAAGGTAATGTTCCAGACATTCATG
AAAATTACTCCAATAGATTTACAAGTGACTTTCCCCCAAAAGCAATCTTT
TTAATTAGCTTCTTCTTGTAGATCAGGATGATGTCAAAGTATATGGATTT
GACTGTACAGTAATGCCATTTTCATTATAGGCAGTGGAAGAATATCATAA
TTTCAGATGTTATGTCTGTCATGCGATGTCAATGTAGCAAATGTTTATTG
TTCATTTGTTGCTATATACTTTTATTGCAGTTTTGACAAAGTGGAGTTAG
TGGACCATGCCTATCAAGAGCCAGTAGACCAGGAGCACCTAATGAGCGGT
GATCAGGGTCCTGATTACAAAAGCTATGGTGCATCTGGTCCTGAAGATAC
TAGTTACTACACTGGTAATGAAATGTGGGTTCATGAAGACAAGGGCACAC
CTAATGAGATTTTGGAAATAGACAAAGAGGTTAAAAACTTGAGGGTATCC
AGTGGTGAAAAATTGGAAGCCTCAGCTCCTTTTGGGGATGTTGAAAAAGA
AGATTTTTCTGAAAATCATGAGGTACCGTGGGTCTCTGTCCAAGATCTGG
CCCCGGAGGTCTCTAGCAAAGATCTATATTGCTCATCCTCAAATTCCCTT
TTTGGATATAACCATGCAGAATGGAAACTAGATGAGCCAACGTTTCTCAA
GTACGCAGATGAGCAGTGCCTTAATAATCCTGAGAAGTGCAGAAGAGTTA
CTCAGGGCTTGATATATAACAAAGAGGTTAGTAATCATGATAATACATCC
CCAGGGGTTCATCTAAATCAGGAAAGAGGGGCGCTGCACCCTCTTGTTTC
AGCCCAGTACCCCCTTGTCGAATTCAGATTTTAGCGTAATATCCAGCATA
CAGCCTTCACTCAGCAATGGATTCTTCCATAAATACATAGAATCCGCTAC
CTCGCATGTGTGTGCTCCCTCTTGTTTAATTTTTCTAGAAAAAACCCTGC
ATCCCACATGTGATTCTTTGTGTTCTTTTAATATCTTTACCATTTGCATG
CAGTCAGTCATATTTGATGTGCTTATCCTTAAAAACACTTTGTTGTTTTT
CTTTGATTTTTGTGTGACCTAAGTGCTTTGTAATATGCATTTTGATTTCT
TAGTTACAGCATATTTTTATTTGCCAACATCACATAGATGAGCCCAACTA
GCCACGAATACAGGAAAGGGAAAGAGTGGAGCTTAGGGGAATGGTTGGGC
AGTGGCACATTTGGAGCTGTGTATAAGTGTGAGTCACTAATGACAAGAGC
ATATCCATATGCAGTGAAAAAGGTAATGTGAAAAAGGAAAGGTGTATCAC
AATATCATTATGAGATTCTGCCTTTTTTGTGTGATCAATTTGCAATGACA
ATTTTACTTGCTGCTGTTTGTTGTTTCACTCATAAAGGTAATCTTGATAC
AATCTTGTGACAAAAATATAGATATCTTCTGCATATATAGAATCATGATC
ACCTTGGTTTGAATGCAGTATTAAATAGCTCAGGGGACACACTTGGTCTG
TCTGTATCTACCGTTATTTGTTGTATGTTTCCAGACATTTGTGGTCCGCA
TACATAAAATCTGGATAGATAGTTGGTATGTGGGTACTTGTTGGGAAGAC
AAAGGTCAAGGTCAATTTCCCAGACTGGACTGCCAAAGAAGGTAGAGAAG
ACCATAATTTACAATAGATTATTCTTGTTGCAGCCTTTTTTGCATGATTC
AATGAGACAAGATGAACTAAGAAGTTAACAAAAGATAAAAATATTCCATG
GATGTAAGATGTCTCCGAACACTTGTGTCATGTGGTGATTCCCCAGGTTC
CTACTACTAATCCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGTGG
CAGAAGCTGGGCTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACATA
TGAAGAGGATGCATTTTGGTTCCACATGGAACTTGTTCAGTTTGGTCAGT
TTTGTATTCAGCATGGTTGAGTTGTTGTGCTTACTTACTTAGTAATACAT
AGATATTGTTAGTTGATTGGAATCAAGCTTTGTAATCAGCCCATAACAAT
GGAAGAGTTGTCAGAATGGCATCTGTGGTGCATAGCATAGTTTGGCAGAT
TTGGAAGTAAGGGTGTATGATTCATGATTTTTGAAAAGTAGAACTTGAAT
AATTCAATTCTTTGAAACACTTTTTGACTTCAGCTGAGGATTCTGCAACA
AGTCTATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTGGG
TTTACTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCACA
AGCAGGAGACCACACATAGAGACATGAAAAATGGTACGTGACACTGATAA
TGTTTGTAGTTCCAAATGGAGTAAGGCCTAAAAAAATGTAAACAAGGTCA
CTGAGTGTTTTGTAAGATATTTGCTGAGTTGGCAAAATGCTTATACAAAT
TCTTTATAATCAATGTCAATGACTTTTATTTCTTGTGCACTTATCAGCTA
TGAAATGTTGTCTTTGTACTCAATTTCAGCCAAGAACGTCATGGTGAGCA
CTGGTCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACAGCCACT
CAAGATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTGTTTTTT
CCAGCTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGGGTGATG
CAGTGAAAGACTGCATCAAGGTAAGTAAATTTTCAAGACACAGCCTCACA
TCATACAGTTATAAAGATATTTGTATCTACCATTAGTGTATAGCATGTTC
TTCCGTGAAATCATTGCGGCAACAGAATATCACATGTAGTAGATAATGGG
CATATGACACTGAAATTCACAACAAGCAATGAATTCCTTAAGATTTTATT
TATCTTTATATACAGAAATAGCATATACAATCTTTACTTCAATTACCTTC
AAAATTAACAATCGAACCATTTAATTTGGTTGGTTGGTTGGTTGGTTGGT
TGGTTGGATAGACTCACAAATTTGCTCAATCATCAAAGTACCTTACCATA
CTAATAAATGCACTTAAGGATAGACCATTATTTTGACAGCTAGCTGTCCT
GATATCTTAATTGTAAACACTATCTTATTAAAGTGTTCTTGTCTTTTCTT
TAATGCAGGACCATGACGATGTGGAAATGTTGCTGCCACTGTGCCAAACA
TTGATATCCCTTCTGAAATATGACAGCGGAAATGCAGATAAAGTGGCCGG
GTGGATGGCAGAAGAAATAAACAGACGGTGTACTAACCTTTTGCTGGAAA
AAAAAAGAGATTAAGCCTTAATTTATTGACAGGTTCAGATGCCATTAGGG
TAGCATTCATCTTGTCAAGGTTCCATCTGTACTTGTCATCTCCAAGGTTT
TGTATTTTACAATGTTTGACTTATAGTGGGAGACCTTTTCTTTTGATTGC
ATCATTGTGTTCAATCTTTTTAAACATTGTATTATCATGATCAAATTTTA
ATGCATCTGAAGAAAATGTAGACTTCAAGAAAAAATTATGTCATCTGACA
CTTTTGTTCTGTAGGGATTTGCATATTGTAAATATCTGATTCTATTGTGA
CATTATGAGTTAAGTGATGCATTGAACGTTTGATTACATGATTAGAAATA
TTAATGGCACACCCTCATTACTATGAGCACTGTGTATCTTGTGAATATCG
CAACTTTTATGAATTTTAAAATACAAATATTAGCTACTACTTAATTAGAT
ATTGTTATGATACATTGTACTATTAGACTACAATTTTGATTGTAAAGCAT
GCCACTATGGCAAAAAAATATGTAAGCTATCATTAACTAGCATTTAGAAG
ATTGTTGTTAGTGAACAGCAAATGGTCATAATTGTACGGCTGTATTAGTC
GATCAAGGCTGTCTAAGATTTGATATGTCATGGATTCTTCTGTATTTTGT
GTAGCAGGGCACAAATGTACTTATCAGCATTTCACTGCCACCAAATTCAA
CTGATGTAGAAGGCATAGTCTGGCATTTTATCACCTGTTATCAAATGACC
AAAAAATTGTACATTTTGGACTATTTGTACATTTTGATATGAAAAGGACA
TCACTGTCTAGATAAATGGAAACCTCTTTGATGGAATGTGTACATTAAGA
AGTCAGTGTGTTATGCAGTATTTGCACTGGTTTATTTGAAATACATATCT
ATTAATTATAATAATATCAGAAAATCTTTACTGAATTCTAAGGTCCTTTT
TATGAAGTGAATGGTAATTGATACGTCTGCTGGATACAGGTAGCATGCTA
TATCCTGGTGTGTTCAACATATTCCTTGTAACATACCAGTAACACTAACA
GAACTAAACTGTGTACTTTAGCTTTTTTAGCACTATAAGTATAACCAATA
CACTAGTAATGGATACAAACCTATATTTCATCCAATGAATAGAGTTTGAC
ACAAAATAATTCAAGGTAAGAAAAAGTGGCACTACTAAAAACAGAAAAAC
TGTGTCAGGTGTCCAAATGCTGGCATTTCTCTGTGTCAACTTTCTCACCA
TTCCCGTTTTTTGTGACTTCGTGATCAGCCTTCAAAGTTTGTTGGACATC
TTCAGTGTACTTTGTCTCAGCATCTGTCTGTATTTTTGATTGGCCTGTTT
TCTTTTCCTCAGATTCATTGTCATTACGAGCAGCAACCTTTTCTCCTGTG
TCTTCAGTCCTGCATTTCTTTCTTTGTGGACTTTCTACAGATGGGGTTTT
CCCATGAATCTCCACATGTCTCTTCCCATCATCCTTTGCTTCCTTGATAC
CAACCTGCAGCTTGCCGTCATGCAGACCAAGTGTTTTCAAGCAGACACTG
GCTGCAGCCTGTTCAGCAAGCTTTTTAGCCTTGTGCCTGTGGAGTAATCA
CACAAGTTTTATTATACTATACGTAAGTACAATAAATCAAAGGCTATGGA
CATGGACAGAACAATTGGTAGAGTAGATATGCCAAAAATTTGGGATGTAG
ATACATGTATAACAATGCCTAGCAAAATGAATCTTGTGTCTCCTGATATA
GTCCTGAAAAAAATTGGATAGGAAGTGGGTAGGAGGGAATTCTCTTTTTT
TTCAGATCCAAGAAATACAGTTTTGTATGCAAAACTGAAATGCATCAGCA
TACTGGTATCTTCAACCAAGGAGGTTTAATATTGAACCTCCTTGCTTCAA
CATCATATCACAAATACATTGCAAAACAAACACCCATATTTAACAAGTAC
ATGTATATCAAGGAAATGAACAAAGAATTACAATGTTTACTACTCATTCT
TACATTGACTGTTCAAAACCTTAATCTGTTAATAGAGTTTGCATCATTCA
AACTTAATGTCCCTTGCCAGCTGTCGACCAAAACAAAGGTTAGGGTTGGC
AGATTTTGCTAGCTATTAAGGGTCAGTCAGATAATTGGAAAACCAACATT
GTTTTTCCTATTTACCTAGGCCCAAATTAAACTTTTATACAAAACGACAA
CTCACCAAAAACTGGATGCATATCTCTTATCATCCACCGTGACAACAGAG
TGGAATTTTGCATCAATTCCTTGCTTCACCTGCAAATATCATCACACAAT
ATATATATATATATACATATATATAATAGTAACAATGATGGTGATGATGA
GTAACAATGCAGAATATACATGAATATACAGAATGTCACAAGTTCAATAG
CAGAGGGCAACTCATTTTTCAAACATTCGATTTCCTATTCGCTTTTAAAA
TATTCCCAGCAACAGACTTTATTCTACCATTGAAATTTCAATAATAAATT
TAGATATAGTTTTGGTTAGGCGCCACAAGTAACAAGACCAACACATATTT
TGCTACTAATATTTTGCACTTGCAGAGAACATCTGTGGATTCGTTTACTA
AAACGGTTCAGCACAAGAAAGAAAAAGACCTTACTGTTTCATAATTTGGC
TGAGGTAGATATTCCCTCCTACTCCAGTCCAGTAGGATAGTCTTGGGGCT
GACTGCAGAAGGGTACTCTTTCCTGGACAATAAAAGACCAATGTTTTCTA
Coding sequence (CDS) from alignment at Sc0000168:628784..636033+ >Blg01653.0 ID=Blg01653.0|Name=Blg01653.0|organism=Branchiostoma lanceolatum|type=CDS|length=780bp|location=Sequence derived from alignment at Sc0000168:628784..636033+ (Branchiostoma lanceolatum)
ATGAGCCCAACTAGCCACGAATACAGGAAAGGGAAAGAGTGGAGCTTAGG
GGAATGGTTGGGCAGTGGCACATTTGGAGCTGTGTATAAGTGTGAGTCAC
TAATGACAAGAGCATATCCATATGCAGTGAAAAAGGTTCCTACTACTAAT
CCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGTGGCAGAAGCTGGG
CTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACATATGAAGAGGATG
CATTTTGGTTCCACATGGAACTTGTTCAGTTTGCTGAGGATTCTGCAACA
AGTCTATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTGGG
TTTACTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCACA
AGCAGGAGACCACACATAGAGACATGAAAAATGCCAAGAACGTCATGGTG
AGCACTGGTCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACAGC
CACTCAAGATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTGTT
TTTTCCAGCTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGGGT
GATGCAGTGAAAGACTGCATCAAGGACCATGACGATGTGGAAATGTTGCT
GCCACTGTGCCAAACATTGATATCCCTTCTGAAATATGACAGCGGAAATG
CAGATAAAGTGGCCGGGTGGATGGCAGAAGAAATAAACAGACGGTGTACT
AACCTTTTGCTGGAAAAAAAAAGAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01653.0-exon-Sc0000168-1570713199:628784..628861 | Blg01653.0-exon-Sc0000168-1570713199:628784..628861 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:630603..630709 | Blg01653.0-exon-Sc0000168-1570713199:630603..630709 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:631121..631255 | Blg01653.0-exon-Sc0000168-1570713199:631121..631255 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:631780..631927 | Blg01653.0-exon-Sc0000168-1570713199:631780..631927 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:632167..632316 | Blg01653.0-exon-Sc0000168-1570713199:632167..632316 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:632513..632703 | Blg01653.0-exon-Sc0000168-1570713199:632513..632703 | Branchiostoma lanceolatum | exon |
| Blg01653.0-exon-Sc0000168-1570713199:633142..636033 | Blg01653.0-exon-Sc0000168-1570713199:633142..636033 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:628784..636033 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01653 |
|
