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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000173:133582..138379- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01629.3 ID=Blg01629.3|Name=Blg01629.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4798bp|location=Sequence derived from alignment at Sc0000173:133582..138379- (Branchiostoma lanceolatum)
GCGGGAACGGAAACAAAGTTGAACACGTTTCTCTCTGGCTCCTAAAATAG
ATTTGTGGAGTATATCTCTCGATAAACATCGCGTTTAGAGATAGTAACAA
AGACTAACATTACGTACTTGCAGAGATCTTAGATCTATAGTCTTTTTAGA
TGTTATAATGGAGGCTGAGTCTGACGGAGGGGATGTGGAGAGTGTGTTTT
CTTCCACGACCTGGACCAGTGGGGGGATGCTGGAGGGGGATGAGGAGGAT
GGAACCCCGTTTTATACCCTCACACCTGGGGAAAGTCCAGGGGAGACAGA
AGGTAGGGTTACCTCCATGAAAAATGGAGGTATTGCTTTTGGTGTGTCTG
TCTGTCTGTGTGTGTTTCTGGCTAACGTTATAAATTTTGTGGTGACAAGT
TAAGCATAACTTAAAAACCTTTGGCAGGATTGTGAGGATATTTGGTATGT
GGATATGACTTGGGAAGACGAAGCTTTTAGGTAGAGCGTAATGAGCCATT
TTAATTCCACGTAATTCATAGCCAGACTGGTAAAATAAAGTAGAGCATAA
TCGTTGAATTCTACATGTAGTGTAATGGGTAATTATGGGCCTCCAGGTGA
TTTTCTTTGGTATGGCAGCAGAACTTCTGGTTTTGATATCTCTTGTTCTG
TACATTAGCTATGGTCACAATTGTTCGGTCCTACATAATATCCTTGTTCG
GTGGTAGAAAACTCTAGACACCCTGCAGCTTTTTGACAAATGTAATTATG
TTTCTACTAACTGGGACTTTATACTGTCTTAAATTCAAATGAAGAAGAAT
TTACTTTGATGATACTGTCTTTCCCCAGCCAACAAGGGCCTACAGCTGGT
GAGCAGAGGGAACCGGCACCAGCCCATCCACGTTCCCCTGGTGCACCTGC
TGCGTCGCGCCCTGCTGCAGCACAACTGGCACCAGGCGGCGCACGTCATG
TCAGCGCTCTGCACCGAGTACCATGATGTAGGACACATCATGTGGCAGGC
AAGGAGAAACATGTTATATGGAGGGCTTGCATGCCCTTTTATGTAAAGCA
TAATCAGCTGTTTTAACTTTATGTGATTTAGAGTCAGATAGCCTGCATGC
CAGACGCCCAATCTCATCCAGGCTAGGAGTTGGACTCCTCAAATTTGATG
TGGAACATAATCGGTGCATTCTAGTCGTATAGCGTAATTGGTGCCCGAAT
TCAGTGTAAAGCGAAGCCAGGTTGACGAATTTAAAGGAGTGAATATCGCT
ACTTGTGGTGTGGTTTAATTCTTTTTCTTTCAATTTCAGGTTGGATCAGA
AGTCTTGTACAACCACCCTGGAACAGAGCCCATTCACCTACAGTCACATG
CAGAGTAAGTTAACTTACCACAGAAAACCTGCAATTTTTGGTGTATGTAA
ATCAGCTTAGATGGAATGTATCTATCTGTAGCTCAACTGGTAGCAGCCAA
ACAGCTGAGTTCCTGGTTCCAATTGCTTGCTAACTGGGAGAACCCGGTTC
AATCCTGGGCAGGACATCTGGACAGTTGGGGCTGCACCTGTCTTTCGGAA
GGTACGTACATTTTTGTAAAATGGAGATCCTGTGTTTGAGGAAGTGCCCA
GAGCGCGTTAAAGGCAAAGGGCTAGCAACCCCTCCCTGTATAAATATACC
CTGCTACTGAAACAGCAAGGAAACTTACTGACCTATGTGCCACTAGGCAC
TACAAGGGTCTGAATGAATGAACAAACAAACATTAGTTACGGATAGAAAA
GATTCATTTGTTTTGTATTGCCATTGTATTTGAGCAACNTTTGTATTGCC
ATTGTATTTGTGCAACCAATGGCAATTCTTAACAAATGCATAAGGGGCAA
CTGTTCATTCAAAGTTGCTACGGTATTTAAAGTCACACTGATTCAGATAT
ATACAAATTATATTAATGTTGATGTTGATGATAACTTTTCTATCTGCGAC
ATATGTTTGCAGTAATATGGAGAGAGTGGTGACCTTGAACCGGTTCCAAG
TTCACCTGGAGTTCATCTTCCACCTGCTGAGTAAGGGACACCTTGAGGAG
GCCTACGAAGCAATCAAGGTTAGAAAATAATATGAAGATGACATAAGGAC
AAGTGGTAGTTGCCTTCATGCTGTTTCACCATATGGATCAAACTCTGTGG
ATCTGTGGGTGGGGGTTCAATCCCAGTGTTGGTCACAACTAAGGGGTTGC
ATTCATCATTTTGGATGGAAACATAAAGCCGACAGCCCAGTGTATGTGGG
AGCTTCAGGCCTTAGCGTCAAGTAAACAAAACCCAACACACTTATCGAAA
ATAGAAGGGGTGACTCGGCGTGCTTGACTGAAAACTCGAGCCGTAGCAAA
GCCTGACATTGCACTTCAACCTAAGCTACTTGAAAAAGCATGGTGCTTCA
TCAAATCAATTTTATCATGCTTCACTAAATTAATTTTTACTACTGCTGTC
ATGGGCGTGACATTTCCAATAGATGTTTTACAAGGCATGTTTCCGAATCT
GATAGCATCAAAATGGAAGTCAAAGTAGAATTAATGAGTTTAACTATCAT
AATAGGAAATTGCCGGTAAATTTGCCATTATACTGTAAATGCAGAAATTT
TTGCGGGGATTTAATTTCGCGGTGGGGAGAAAATATCTTCGCGTGTTCAC
AATGGAAATGCTTTTCGCGGTGGTTTTAAGTTCGCGGTAAAGAGTTCACC
GCAAACACAGAAAACAAAAAAACATAGCGAACAGTTCTGCATTTAGAGTA
TTTGACACACCAGCTTAAGGTAAAAATGTGCATGTTATTATTTTACAGTC
GGGGCCGCTGAGGAAGAAAAGGGCCTTATTTTTCACCAAGGCTACTCAGC
CCGTCTGGGTGCCCATTGTGAAAGCCTACACAGGACTGATAGAGTACGGA
CTGTGGCTGCAAGGAAGAGATAAAGTCAGTCAGTTACAGAACGTCAGCGG
CCTCACGGGAGGGTACGACACACGTAAGGAACATCTGAAACAAAGTACTG
TAAATGCATTTAAGTTTGCAGTGATTTAATTTTGCAGTTGGATTTGGATT
TTTAGGATTTTATTGGAATTGCAACAGTGCAATACACGTGGGACACAGGC
AGCTATTGCTGGTGTCGTGACCCACACACATAATATATACCTGTTTTTAC
ACTTGGGTGGAGTGGGGAAAGTCGTGTTAAGTGCTTTTCCCAAGGGCATA
AGATCGGTGGCGTCAGGGGATAGGAACCCGGGACCCTTGGGTTCTGAGTC
GAAGATCCTGCCGTTACGCCACATGACCCCAGGTTGGGTAAAGTTAAAGA
GTTTTTGCGGTGGTTTTTAGTTTGTGGTTGAAACAAGATGATAGGTGGGC
AGAAGACACAAAAAGGATTTTTGTGGTGGTTATAAGTTTGCGGTGAAGAA
CAAAAAATCATTGCAAATCTAAATGCATTTACAGTACTTTAAATCTTGTG
TTTGTGGTTGTTTTGTTTTCATGATTTTTGTGGTGGCCTCTCCATTGTGA
AATTCATGACACCATGGATATGTGTTTCTATTGTATAATTGCTAATGTTA
TTACAGAACTGCAAACTTAAAACACAGCAAAAAGCTCTTTTCCCCTTCTA
CCATGAACTCAGGTCCCCACAAGTCATATCTAAATGAATTTACAGTACCA
TACTAGTATTCAAACAATTCCGATGAAATGTAGTGATATTCAAACATCTC
GGGTTTATTTCATGGGATGAAATGGGGTAAGAAGATGACATTGAAAGAAG
GAAATGTTACCAAATTTAAAGTTGCTTTTAAACAACGAGAAGAATTTTCG
TTAAGTCTGCATGTGGTTGACGCAGTGATAAATAAATGTTAAACAAAGTG
ACATTCCTTGATATTTTAACCTTCTCTCTGCTGCTTAACCCTGTAACCAA
TACATATTTGGTTCCAAATCAGCAGGGAAAAATTAAAAGTGTGATATGTC
TTGATATAACTTACTGGTGTATAACTGCGGTATTGAGCGCATTGTTTTAC
AGGGGATGTGTTGACGTCGTGTTGGCGTAACGGTTAGAATGTTTGGCCCA
GAACCCAGAGGTCTTGCATTCGAATCCGCTAACATGCCACCGATGTTGTG
TCCTTTGGAAAGGCATTTTACACGACTTTCCTCACTTCACCCAGGTGTAA
AATGGGTACCTGACTTTGGTTGGGGAGGTAAAAGGCGGTAGAAGGACAGG
AATGGGCTCCGCCTTCCAATACCATGCCCTAAACACAGTGGATAACAACC
CACTACACCTACGGCCTCATAAAGGCTATGGGACTACCTTTACCTTTTTT
ACCTTACAGAGGAGTCTGTTATGCTGGACTCGACCCTCACCACGTGTGAG
GAGACTGTCCAGCGGTACGCAGGCAAGGCTGAGGACAACTTTGAAGATGT
CTTGAAGGAGCCTGGTGTCTGGGACATCTTTGTGACAAAACAAGTGGAGG
TAGCTACACTAGAACATGTTTTGTTGTTGCTTACAGTCAAATAATAGTAA
CACTTTTTCTGTAAGTGAATGGTTAGCCATGGTATAATTATACTAAACTG
CTGTTTTTATTCTCCTAGATGCTGGAATACTATGACAGGACAGAAGAGGC
AGGGAAGGTTCTGCAGAGTTACTGGGAAAAGAACCCAGAAAACCCAAATG
CACACAAATATTATTACCTCTTCCTGAAGAGACACAACAGTCCCGATGAA
CAAAAGGTCAAAGTGCTAAAGGTTTGTTACATTAGTAATTCCAGTATACT
TACAAATTAGTGTCAACATTAGACAAAAATACTGCCAGTAAACCTTAC Coding sequence (CDS) from alignment at Sc0000173:133582..138379- >Blg01629.3 ID=Blg01629.3|Name=Blg01629.3|organism=Branchiostoma lanceolatum|type=CDS|length=993bp|location=Sequence derived from alignment at Sc0000173:133582..138379- (Branchiostoma lanceolatum)
ATGGAGGCTGAGTCTGACGGAGGGGATGTGGAGAGTGTGTTTTCTTCCAC
GACCTGGACCAGTGGGGGGATGCTGGAGGGGGATGAGGAGGATGGAACCC
CGTTTTATACCCTCACACCTGGGGAAAGTCCAGGGGAGACAGAAGCCAAC
AAGGGCCTACAGCTGGTGAGCAGAGGGAACCGGCACCAGCCCATCCACGT
TCCCCTGGTGCACCTGCTGCGTCGCGCCCTGCTGCAGCACAACTGGCACC
AGGCGGCGCACGTCATGTCAGCGCTCTGCACCGAGTACCATGATGTAGGA
CACATCATGTGGCAGGTTGGATCAGAAGTCTTGTACAACCACCCTGGAAC
AGAGCCCATTCACCTACAGTCACATGCAGATAATATGGAGAGAGTGGTGA
CCTTGAACCGGTTCCAAGTTCACCTGGAGTTCATCTTCCACCTGCTGAGT
AAGGGACACCTTGAGGAGGCCTACGAAGCAATCAAGTCGGGGCCGCTGAG
GAAGAAAAGGGCCTTATTTTTCACCAAGGCTACTCAGCCCGTCTGGGTGC
CCATTGTGAAAGCCTACACAGGACTGATAGAGTACGGACTGTGGCTGCAA
GGAAGAGATAAAGTCAGTCAGTTACAGAACGTCAGCGGCCTCACGGGAGG
GTACGACACACAGGAGTCTGTTATGCTGGACTCGACCCTCACCACGTGTG
AGGAGACTGTCCAGCGGTACGCAGGCAAGGCTGAGGACAACTTTGAAGAT
GTCTTGAAGGAGCCTGGTGTCTGGGACATCTTTGTGACAAAACAAGTGGA
GATGCTGGAATACTATGACAGGACAGAAGAGGCAGGGAAGGTTCTGCAGA
GTTACTGGGAAAAGAACCCAGAAAACCCAAATGCACACAAATATTATTAC
CTCTTCCTGAAGAGACACAACAGTCCCGATGAACAAAAGGTCAAAGTGCT
AAAGGTTTGTTACATTAGTAATTCCAGTATACTTACAAATTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01629.3-exon-Sc0000173-1570713199:138078..138379 | Blg01629.3-exon-Sc0000173-1570713199:138078..138379 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:137382..137551 | Blg01629.3-exon-Sc0000173-1570713199:137382..137551 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:137026..137090 | Blg01629.3-exon-Sc0000173-1570713199:137026..137090 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:136312..136417 | Blg01629.3-exon-Sc0000173-1570713199:136312..136417 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:135407..135581 | Blg01629.3-exon-Sc0000173-1570713199:135407..135581 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:133931..134070 | Blg01629.3-exon-Sc0000173-1570713199:133931..134070 | Branchiostoma lanceolatum | exon |
| Blg01629.3-exon-Sc0000173-1570713199:133582..133811 | Blg01629.3-exon-Sc0000173-1570713199:133582..133811 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000173 | genome | Sc0000173:133582..138379 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01629 |
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