Blg01626.0 (mRNA) - B. lanceolatum

Overview
NameBlg01626.0
Unique NameBlg01626.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000173:468030..471228+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01626.0 ID=Blg01626.0|Name=Blg01626.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3199bp|location=Sequence derived from alignment at Sc0000173:468030..471228+ (Branchiostoma lanceolatum)
ATGAGCGCCACGCTAGCCAACATGACAAGGAAGTATGTTAAACCCAGCCA GTTCATGAAGTGCAGCAAACTGGTCCAAGTGAATCGACTCTTGGTCGTGG GACCCATGTTGTTTGGCAAGGTAGCGGTGATGTTTCCTTCAGCTTTGTTC GGAAACCATTCCCTGCAAAGTTAACAAACTCTATTTAAAGCTTGAGAACT ACTTGTGTTTCGACTTTTGTTACGTATTATATTATCATCAATCTATTTGT AGTGGCCAATTTAATGGAACTGCAAAGGGAAGTTCTGTGTATATCAATGC ATGTTTACATTTTTGTTAATGAAAATGAATAAATAATTTTTTTTAAAGTT AACATACTAGTTCCTTTTGCAGTATGTAATTATACAGGCTTAAATTTACT TAGAATGTCCTTGATGGTAATTATAAGGCAACAGCAAGTAAGACATCCTT GGGCGCATTGATTTTTTACTCATTTCGAAAAAAAAAGGTGCTATTTGGTA ACCACACTAGTGTCACTTTGTGAATCTCTTGAATACAGCAATTAAACGCT TTTGGGCTCACATGCAGTGATACCATGTTTTGTCGCTTTAGTTCTTGTGA CAACATTTATGGTCTCTGTTGAAAATTTAGTCATCTTGTTTTTTATCCAT CCTGTCTTTTTTTAGTTAACTCACATTAAATTTGAGTCTGCAGAGGATGT CAGAGGATGTCAAACATGAAATTTACTTGCTGTTGGCTATCATAAAGTCA GCTAACCTGATCTGTTAAATTTGTATACTTGGATGTTGCATGATGTAAAC ATAGAAATTTCATGCTATCGCGACATGACAAAGCTAGAAAGATACACTGA GTCAAGAGGGATGCAAAACGTGCTCTTAAGCACTTAATGGAGCGTCAGAA GCTAGTTAAGAAAGTATCAGCATGCGCTACAATACCTAACTTTAACGTTG GTGGTCATGAAACGATAAAACAGTTATACCTGTCCTGAATCGATGAGTGG GCCGAATCCGGAAGTGTTTCTGAGAACTCAGAACATGGGTGTGACCACCT ATAATATGGGTAACATGTTTTAAATTGATTGCTTAATTTCTTCAAATTTG TGGCATAATTGATGTATACTTAACCATTATTCTTATCATAATATATTTAT AAAGATAATTAATCATTCTATAGTGTGATTTGTGGTCGGTTTTGCTGATA TTTTAGAGTAAATGAAATATAGTCACCCCTATATTACAAGTAGAACCTTC TACAGAGGTCATTTGAGGGGTCAATCCATTACAGAAGACTGTGCCGATGT AAACGCACCGTTAGAGTCAGTTTTTTGACATATCCCTCCATATTCTTGGT GTAAAAAGTATCGTTTTCTTTCCAGGTGTAGGTAGTATGGCTTTCCACAT TCCTCACATCGCACTGGGGGACAAACTCTGGCTCTTACACAGCGCGGCGT TCATCTATTACCTGGCGGTGTCAGTCACCTTTCTCACCACCGATCTCTAC ATCACCGTCCCTCACATCTACGCGGACTATGATTTTACGGGAATATTGCT TCGGTACCTGCTCGTGGTGTACATCTTCTTTAACATGGTGGCGAACCACA TCTTGTGCACGATCACGGACACCACGTACCGCAACCGACAGGACCCCGAC CCCGTGCCACGGTCGTGGGGCCATTGTATGACATGTCAGGTAAATAAACA TCATTTTGGGTTCCCGGAAAAGGTGGAGTGGACTAGTGGGGTGGGCTACC CTTCCTGGGCCCCAAGGCTATTAATGGGGGTTAGGTCTCTAATGGAATTT CCATGAGGAAAAGGTGGTTCCATAAGAGGGCAAACCCCCATGCATATCCT TGAGGCCCAGAAAAGGTAGCAGTACCGTAGCATTCTGAGTTAGACCACCC TACCAGCCCAGCTCACCTTTTCCGGGAACCCCATAATTTCATGGATTCCC TAATCTCAAAGCAGATGTAAGGAAGAATGCTTTTGGTAGTATGTCTGTTT TGTGGTTTGAAATAGCAGCATAACTCAAGAAGCTATGGATGGATTGTCAT GAAATTTGTATATTCATAGGTCATGTCCTATAGAAGATCGATGATGATTA GATTTTGGGCCTCCTGGCGACTTTCCTTTGGTACTGCAGAAGAAATTACA GTTTAATAATCTTGTGTTCTGTACAGCTTTGAATTCCCATTGTTTTAGTT GCTATAAATAATTCAAAATTTGAATGTAATCCTATATTTTCAACATCACT AAGAGACGAGAAGAAGCCGAACCTATGTACATGTATTAGAGTAGTTTTGG AACCCATGTTTTAGATAAGTACTATATGTACTTAAATACAACCTTTGTAT CTGTATATGCCGATAGGGCATGAATGCTGATATGAATGCTGAACATAGAA CTTTTTCTAAAACTTCTTACACCCCTTCCGTTGATGCTCTTTCTTAAATC TTTCTTCTTCTTTAATTTTTTGAACAGGTTCACACCCCGCCTCGTACCTG GCACTGCAGTATTTGTCACAACTGTGTCCTTCGGCGGGATCACCACTGCT TCTTTACCGCCAGCTGTGTGGGGCACCACAACCAGAGGTACATCCTTGAG CCTCTATATTTCTTTCTTTGTTTCCTCAAATTATTCGACAAAGACAAAAT AATTTACATCCTTTCTTTCTTTCAGGAGCATGAAATTCCTTTCAGAAATT TGTGACAAGTACCTTGATGGCATGACTGTCTCTAATAATGACTGTTCTCA TTCCTTTAAGGTACTTTATCGTCCTGTCATTCCATGTTGCTGTCGGGAGT TTGTACACCGGGCTCCTTAACGCCGAATATCTGCACGATTACTACGTACC ATTCAGCGGTACTGGCGTATTCTCCTACCTGTTCCCCGTGGCGTTCTACA AGCTGATAGTGGGCCAGACTACTGGCTTCTTGGTCTTTATGTTAGTGATG ACCTACGTTGCTTTCGGTATGAGTATCATGACGGGGACTCTGTTCGGGTG GAACATGCTCAACGCGTACAACGGACAAACGTCGTGGGAGTCCCACAACG AGATACGGACCTACGACCAGGGACCCACAAAAAACTTTTACGAAATTTTC GGCAGCTTCTGGATTCTGAGTTTTCTGATACCTTGGCAGACCACTCTGCC CGGAGATGGAATAGACTGGCGAAGACCAAAACCTCTGAAATCTTTGTAA

Coding sequence (CDS) from alignment at Sc0000173:468030..471228+

>Blg01626.0 ID=Blg01626.0|Name=Blg01626.0|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000173:468030..471228+ (Branchiostoma lanceolatum)
ATGAGCGCCACGCTAGCCAACATGACAAGGAAGTATGTTAAACCCAGCCA
GTTCATGAAGTGCAGCAAACTGGTCCAAGTGAATCGACTCTTGGTCGTGG
GACCCATGTTGTTTGGCAAGTTAACTCACATTAAATTTGAGTCTGCAGAG
GATGTCAGAGGATGTGTAGGTAGTATGGCTTTCCACATTCCTCACATCGC
ACTGGGGGACAAACTCTGGCTCTTACACAGCGCGGCGTTCATCTATTACC
TGGCGGTGTCAGTCACCTTTCTCACCACCGATCTCTACATCACCGTCCCT
CACATCTACGCGGACTATGATTTTACGGGAATATTGCTTCGGTACCTGCT
CGTGGTGTACATCTTCTTTAACATGGTGGCGAACCACATCTTGTGCACGA
TCACGGACACCACGTACCGCAACCGACAGGACCCCGACCCCGTGCCACGG
TCGTGGGGCCATTGTATGACATGTCAGGTTCACACCCCGCCTCGTACCTG
GCACTGCAGTATTTGTCACAACTGTGTCCTTCGGCGGGATCACCACTGCT
TCTTTACCGCCAGCTGTGTGGGGCACCACAACCAGAGGTACTTTATCGTC
CTGTCATTCCATGTTGCTGTCGGGAGTTTGTACACCGGGCTCCTTAACGC
CGAATATCTGCACGATTACTACGTACCATTCAGCGGTACTGGCGTATTCT
CCTACCTGTTCCCCGTGGCGTTCTACAAGCTGATAGTGGGCCAGACTACT
GGCTTCTTGGTCTTTATGTTAGTGATGACCTACGTTGCTTTCGGTATGAG
TATCATGACGGGGACTCTGTTCGGGTGGAACATGCTCAACGCGTACAACG
GACAAACGTCGTGGGAGTCCCACAACGAGATACGGACCTACGACCAGGGA
CCCACAAAAAACTTTTACGAAATTTTCGGCAGCTTCTGGATTCTGAGTTT
TCTGATACCTTGGCAGACCACTCTGCCCGGAGATGGAATAGACTGGCGAA
GACCAAAACCTCTGAAATCTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01626.0Blg01626.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01626.0-exon-Sc0000173-1570713199:468030..468149Blg01626.0-exon-Sc0000173-1570713199:468030..468149Branchiostoma lanceolatumexon
Blg01626.0-exon-Sc0000173-1570713199:468695..468737Blg01626.0-exon-Sc0000173-1570713199:468695..468737Branchiostoma lanceolatumexon
Blg01626.0-exon-Sc0000173-1570713199:469405..469718Blg01626.0-exon-Sc0000173-1570713199:469405..469718Branchiostoma lanceolatumexon
Blg01626.0-exon-Sc0000173-1570713199:470507..470616Blg01626.0-exon-Sc0000173-1570713199:470507..470616Branchiostoma lanceolatumexon
Blg01626.0-exon-Sc0000173-1570713199:470790..471228Blg01626.0-exon-Sc0000173-1570713199:470790..471228Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000173genomeSc0000173:468030..471228 +
Properties
Property NameValue
GeneIDBlg01626