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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000173:14363..22382+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01623.3 ID=Blg01623.3|Name=Blg01623.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8020bp|location=Sequence derived from alignment at Sc0000173:14363..22382+ (Branchiostoma lanceolatum)
TTGTATATTTGAACTAAAATTGTCTTATCATAATATTACAAACAGTTGCC
ATACAAAGCTTCAGGAAAATAGCTAAAAAAATGGTTTTTCATCATGAATT
GGTTCTTCCTATAGTTATAAATAAAACTAAACTTGTACCAAAATGAAATT
CTAATGTGTTGAAGTTCCATTTTGTGTACATGTATTTTGCTGTGGTCTAA
TGTCTATCATGCATAAAATGTCTTTTATATATTGCAGAAGAGCATTTGAA
TTATTGCAGTTTATTATATAACTTAAGGCTAGTACATACTGATTTAAGAC
TATAATATGCACACATTTATACTCCACTCCAGGCTAGAAGGGTGATGTTC
ATAGCAGTGCTGAATGTGCTGTGTACCCTGGTGTTGTTTGTGTGGTGTAG
GACCACAAGGAGCATGGGTCAGTATACAGCAAATTCTGTTTATTCTTGTC
TTGTTAGTAGGATGTACTGTCATCAAGGGAGCACACCCCAGTGTATTTGG
GGTTTGCATTCAAGGCTGCTCACCCTCTAGTCTACGTACTGTCTCTTCCA
GGGAATCATTCTTAAGTAAATCAACTGTGTATGGTGTGAAAGCATATCCC
GTCCAGTTCCACTACAAGACCAACTGAGTTTTGTTTCTTCAACCTCCCTA
GTTTTGGTAAATTAGAAACCCTTTCGTCACTTTTTTGTCTCGCACTACCA
CAGACCCCGGTTGCGGAAGAACTGGGGTGTGCACCGTCAATCTTTTTTTA
GCAGTACAGTTACTGACAAATAGAGAAAAGCAAATTGAAGGTGATTTACA
CTGTAAATTGACTTTCAACAATTATCTAAACATTTATGTTATTGTCAAAT
AATGTTACTTATGGTATATCAAATCTTATTTGTTGTAGGGAGTGGTGACA
GAACATCTTTATATGTATTGACGAATTTTCATTTTTTTGTGAGGGAAGAA
AATTGTTTTTCCAATACAAATGTATCTGTTGAAGTTTTGGAATCAATTGA
AGCATAATCTCTTTTCTTTTCAGCTCTGCTGGCATACACATACCTTACTG
TGTTTGACATTTTCTGGTGAGTTGTATTACTACTCTTAGTTATACATATC
TATCTGCTCACTTTCCATTGCACAATTGTACTGTACTTTTACCAACTGAA
GGCAAAATTTGTATACTGTGCAAGTGTACATGCAGGGTTCCACATACATG
TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCATAC
AAAGCTTCAGGAAAATAGCTAAAAAAATGGTTTTTCATCATGAATTGGTT
CTTCCTATAGTTATAAATAAAACTAAACTTGTACCAAAATGAAATTCTAA
TGTGTTGAAGTTCCATTTTGTGTACATGTATTTTGCTGTGGTCTAATGTC
TATCATGCATAAAATGTCTTTTATATATTGCAGAAGAGCATTTGAATTAT
TGCAGTTTATTATATAACTTAAGGCTAGTACATACTGATTTAAGACTATA
ATATGCACACATTTATACTCCACTCCAGGCTAGAAGGGTGATGTTCATAG
CAGTGCTGAATGTGCTGTGTACCCTGGTGTTGTTTGTGTGGTGTAGGACC
ACAAGGAGCATGGGTCAGTATACAGCAAATTCTGTTTATTCTTGTCTTGT
TAGTAGGATGTACTGTCATCAAGGGAGCACACCCCAGTGTATTTGGGGTT
TGCATTCAAGGCTGCTCACCCTCTAGTCTACGTACTGTCTCTTCCAGGGA
ATCATTCTTAAGTAAATCAACTGTGTATGGTGTGAAAGCATATCCCGTCC
AGTTCCACTACAAGACCAACTGAGTTTTGTTTCTTCAACCTCCCTAGTTT
TGGTAAATTAGAAACCCTTTCGTCACTTTTTTGTCTCGCACTACCACAGA
CCCCGGTTGCGGAAGAACTGGGGTGTGCACCGTCAATCTTTTTTTAGCAG
TACAGTTACTGACAAATAGAGAAAAGCAAATTGAAGGTGATTTACACTGT
AAATTGACTTTCAACAATTATCTAAACATTTATGTTATTGTCAAATAATG
TTACTTATGGTATATCAAATCTTATTTGTTGTAGGGAGTGGTGACAGAAC
ATCTTTATATGTATTGACGAATTTTCATTTTTTTGTGAGGGAAGAAAATT
GTTTTTCCAATACAAATGTATCTGTCGAAGTTTTGGAATCAATTGAAGCA
TAATCTCTTTTCTTTTCAGCTCTGCTGGCATACACATACCTTACTGTGTT
TGACATTTTCTGGTGAGTTGTATTACTACTCTTAGTTATACATATCTATC
TGCTCACTTTCCATTGCACAATTGTACTGTACTTTTACCAACTGAAGGCA
AAATTTGTATACTGTGCAAGTGTACATGCAGGGTTCCACATACATGTATA
GCATTGTTTTTATTGTGTGGTTTCCTTTTATAGAGCTACCTGTGAGCAAG
TGGTTGTTTATTGTTGGTAATCAATTTACTCTTTTGTTAAATCTCTAGCC
TGATCACATGTTTGATCAGCATCTGGGTTTCCATACAGAAGCCAACTTCT
GCATTTGCATTTGGGTAAGTAAAAGACAGTACTAACTTACTTATCCTCTT
CGACATTAAAATTAAAGACAGTGCAGCTACTTTAACTTGAAGTACAAAGT
ACTAGTATCTCAACTGGAATCGCTAGAAATAGTTCAACAAAAGCTTTAAT
CATAGGTGGTTACCTCTTTGCAGAACCTTACTAAGTAACTTCGTCAACTG
TACTTTTGCAAGAGATATTACAGTAGCTGATGATTTAATAAAACAGAATA
TTTAGCAAACTTCTAAAGGCGTCAGATCTTAACACTAGTAAGCTTTTTAT
AGCATGTAGTTTGTGATGTTTTACTTAAGCTGTTTCCTTGTCCCTTCAGA
TATGAAAGATTCGAGGTCCTTGCAGTGTTTACCAGCACAACGTTGGCTCA
GCTGGCGCAACTGTTTGTGGTTAAAGAAAGGTAAAGTAGCGACATGACTC
ACTGACTAAAGATAGCGGATGCTGTCTGGAACATTGGCCCATTTACGAAA
CTTGAGTAACTTTGTATGATCTCATTACCTGGATCTCTAAACTTCATTTG
CACAGTCCTTCTTAACTTTACAATTTTGAAGAGATGCTTGCTTACTTGCT
TATGTCAAGACTTTCCAGTTTCGAGATAAACTTGTTATATTTACATGTTA
TTTGTGCTGTTTGGTATTGCAGTATTGAGAGGCTGCTGCACCATCATGAT
GTCCATACGTAAGTTTTGTCTTCAAAACTTTTGATCTGTATGTTTGTTTG
TCTTGATTTGTGTCCGTAGCTATTTGAATATTGTAGAGTGACAGGATGTT
AGCCGGTATATTATGTAACATGAGACTGGAAGGATAGGAAGGTTTGCTTG
GCCCGGGTCCAAAGTTGGTCCTTTAGGCTGGCAGGAAAATGCATAGACAG
ATGTAGCAAGAAATTTACAATAATGAACAAATCAAGAAAGTAAAAAAAAA
AAAAAAATTCACTTTGGTATGAGATCTGCGATTTCTTGTTGTGTATTGAA
AATGTGCCGTTGCATCTGCAGAAATATTACCTGACATACATCTTGTACTT
AGTTCTTGTACATATTTCCATGTCCATCACAAATTCAATAAACACTTAAA
CATGCGTAGATGTGTTGAGTTTTGGTATAAAACCTGGTTTCCCAGTCCTT
TCCTTAGTCACTGACGAAAGACAGCGGATGCTGTCTGAAACGTCTGACTG
TTTCAAAATTTTATCCAGTTGCTTGAGTCACTATTCTTGGCCCAACACTT
AAGCATGTTTTTTTTTGCTTACAGTGGGAGACTGTTGGTCGGCACTGCCT
TTGGCTTTGCTGTCCACATTGTGTCTACCTACTTTGTCACCAACAAGGCA
TTCCAGCATGTGTCTGAGGGTGAGTAGGCCATATGTGAAGATGTTTATTT
GTTACTGTGAACAACCTACCAGAAACTCTATACTGCAGTGTAATGCAACA
ATTGTACATAGATTTCCAATGATAGAAGGATGTCCCTGTAGCTCAACTGG
TAGCAGCCTCACAGTTTAGCTCCTAGTTCCAATTAGTTGGTAACTTGGAA
ACATGGTTTCAAATTCTGGGAAGGGTATCTCGGTTGTAGCTGCACCCATC
TTTCAGAAGGGACGTACGATGGGGGTCCTGTGTTCAAGGAGGTGCCTTGA
GCATGTTAAAGTGGAAGGGCTAGCTGCCCCTCCCAGTTGAGTATACCCTG
CTTCTGAAACAGTAAGGAAACATGCTGCCCTGTGTTCCACTAGGCCCTAC
AGGGGTCATAAGGAAGAACTAACATAGTTATGTTTCCATGTGTGATCTTT
GGTTATTTTTTTCTTTCTTCTTCAGCCTCCAGCTCCAGTTGGCTACAGGA
GCATGTAGCAGACATGAGCAGAAGGTATGATATTTTTATATAAAATTTGT
GGGTCTGTGTTCTCTAGGTCTCAATTCAGCACTCGTCATTACATCATCTT
ACAGAATTTTGCTGCATATGACAGAGAAATGTGAAGATCATTCTGTCAAT
GTTGACGGACAAAAATCAGTGGGTAAAGATATAAAAGTATCCAAATTTGA
ATAGTAATAATTTAAATACCAGCCTGGAATTTTAACAATAACGAAAATCT
GTACATGATGAAGGAAAAGTCTCTTTAGGATTTTTTCGTCAATGGAAATT
TGGAATTTTTCTGGAATTGACAGACCAAAATGGTCATGTCCCTGCATACT
GTGTGGTCTGTATGGTAGGCTTGTCTGCTATTACAAGGTCTTTGAATATT
GGCAAAATAAAATTCTAGCAATGCATCAAACCTTACAGCACTGGACTTAT
CTTTTCTTGGTATTTATGAAGTTTCTTGTGTTAAGCAGTATTTTTTAGTG
TTTGTAATAACGTGGGAAAGATTTTGTACTAATTATGCTGCATTTCCAGT
TTGTGCAGCGTCATTCCAGGACTGAGTAGCTTGTTACTACCCAGGATCAA
CCCTCTGCCTCTCATCGCTGTGGCAGGGGCCCTGGCTCTCTTCATCACAG
ACATGCTCATAGAGATCAAGTAAAGCCTCTATAATTTGTCTTCCCTACTA
CATTTTTGGCGACGCCTCAGGGGCAGGCCTAATTAATTTTGGTGTTTTAG
CAACATGTTCCTCCATTTAATTTTTTTTTTAATTTTGTTTATTTTGTCTT
CTGGCTGCAATTAAGGTACATGTATTGATTTTTTTCTCCCCTAGTAATTA
TTTCCGTGCGGACACATTTGCAGCCATCTCCATAGCCATCATGACCGTCG
GTACCATGTTTCCCATGTCTGTGTACAGTGGCAGGATTCTCCTACAGGTC
AGTACTGGCCTTCTTTATGGCTGTCATTCCACAGGAAAATTGATCATCCG
ACGAGTCTTTGAGCTCTGAATTACATTTTTGGCAGTGATACTCCCACTGT
TCTCTTGATCATCTGGCAATTTTTAGAGATTGGCCAATGTTTACATGTTC
CTGAGTCTCGTCCAATGCAATGGGTTAGATTTTCAAGCGAAAAATACACT
GACTCAGACTGTAGCAGTAAGCAATGGTACCACAGATTGTCCTCTTCACA
TTTTTTTGCAGAGCCAAATGTTCAGTAACTTGACAATGACAAGGTTTTTG
ACCTAACTATGAAAATGTATGCTCTTTAATTTCAGACGACACCATCTCAC
ATAATAGGACAGCTAGACAAGTGTTTGAGAGAGGTGGGTTCCCTATAGTT
CTACTGTTTCTAGTTTGCAGAAAATTCGGTGATCAGAAATGCAAACTGTG
ACTTTCAAGGTTTCTCTACCTTCTCTGTATCTTCATCCAGTAGTGGTTTA
CCTTGGATTGTCACAACTCCACACAAGATGACTGGTTCTGATGGTTCAAT
GTAGCTGCACTCAAATGCGCTGGCTAAGCCAGGAAATCTCTATTGGGGAA
GGGCCTGTTGCACATGCGTGTTAGTGGGTCATTAATATTAACACTTGTTA
CATCTTTTTACACTGACTTGGTTGAAAAGTAAATTTATGAGATAACTGTA
CAATGTGCCTCTCTTTCTTAAAGGCATCAACTCTTGATGGGGTGTTGGAA
TTCAGGAACGAACATTTCTGGACCGTCTCCTTTGGAACTTTGGTGAGTAC
TTAAAGTCACAACATGTGTAGTGCATGATGTTATGTACATGTTATATATG
TATATATATTTATGTTTATGTTTGTTGTCTGCATTGAAATAAGAGATTTC
TCAAAAGACTGTAGAAAGGAAAAACAATACTTTGATTAGTCATTAAAAAA
TTTCATCTTCCACTTTCAGGCTGGCTCACTTCATGTTAGGATCAGAAGAG
ATGCCAATGAGCAGGTAAGCCATGTACATATGATTTTCCCTCTGAGAAGC
ACTCTTAAGTTTCCATGGTTGATTTCAACAAGGATAATTTAGCATAGAGT
TTTACAATATATATCTAAAACCTTTTCACTCATTAGGGCATCTCCATTTA
GGACCTCAGATGATTCAATAACAGTAACTTGTCTATGAAAATAACCATCT
TTGCATGATATCTACTGTACTGATGTATGTATATATTTTTTCAGATGGTC
TTGGCCCATGTCTCGAATCGCCTGTCCAACTTGGTGACCGTACTGACCAT
CCACATCTTCAAGGACGACTGGACAAGAGCATCCCTGTCTGCCTCCAACT
ATCCCTCCCGTCAACCCTACACCAGCACACCCGCCAAGACCGGACTGGAC
CCCACCGTCCCGACCATCAACCCTTTCCAGTCCCTCCCTCCCCTGGCCCC
TAACCTGTCCACCATCACCCCCATAGGTTCCCCTGCAGGCCCATCCCTGC
ATCAGCCCGGCAGTAATACTAGTAGACTGTACAGTAGTGGCATCAATGCA
GCACCCAGTCATATACCTGCAGGGACCACTGGGGGCAGGATACCACTCAG
ATCCTATCAGCCTACTAATCTATTTGGTGCTGGCAGTGGGACAGGACAAA
AGTCAACGACAGAACTTGGGCACAGATGAAAAGGCTCGGGATACTGTAAT
TCTTGAAATTTTTTTGCGGTGGTTTTATGTTCGCTGTTTTTGCGGTGACC
GCTCTGGCTCACAGCAAACTCAAAACTGGTCAACTACAGAACTTGCACGC
AGATGAAAAAGCTTAGGATAACTGTAGTTCTTGAAATCTTCACGATGGTT
TTATATTTGGCAGTTTTCACGGTGACCGCTCACAGCAAACTTAAAACCAG
TGTTTCCATTACTGTACAGTATTATGTGACTATAGTGCTATCATGAACCA
CTGCCAGCACTCGATTTTGTAAATACCACAAGATAAAATCAATGTGAACT
AAAAAGCATTTGTAGTATGTATAGCTACATATGTATGTAGGATTAAGTAG
TACATTAAGCTAAGGATAGGAGAAAAACCTGGTATTAATACTGTATAGAC
TGTATCAACATAGATGGTCTGTACATGTATGCAGGTCAGGTTGTATGTGT
ATCTGCATCTTTATAGCCGGTATAACCGCCATTCAGCATAACACACCAAC
TTCACAGGCACGCTGCGCAGCAGCAGCTGGTTTGTAGTAGCAATTACTGC
TCTATGAATTAATGTTGGGTTAGAAGTAATAAGCTAATAGGGTCACAGTA
TTCTTTCTATCCTCAGTAATGTTTTTGCCAGTTGTGTTAATAATTGTATG
TTTGGCTGCAGTAGTATACTTGTATTGAACTTGTATGCCATTTCAAGGTT
TCTTATGTTAGATGAAGATCATATGGTTCATGGAACCATGTAGAAACTAA
AAGTGAATAATAGTTATCATTATTAATTGTACTACATGGAAGAGAAATGT
CATCAAATTTTCTACAGCTCCATATGATCACATATGCTTCTGTGCCACAA
CTGCAACTACTGGTAATGTAGACATTTTGTCACATGGCAACATTACATAA
TATTTATCAAGCAGGCACAATATTGATATTCATGTTTCCAAAATAAAATA
AACACGATGTTCATTTGACC Coding sequence (CDS) from alignment at Sc0000173:14363..22382+ >Blg01623.3 ID=Blg01623.3|Name=Blg01623.3|organism=Branchiostoma lanceolatum|type=CDS|length=1263bp|location=Sequence derived from alignment at Sc0000173:14363..22382+ (Branchiostoma lanceolatum)
ATGTTCATAGCAGTGCTGAATGTGCTGTGTACCCTGGTGTTGTTTGTGTG
GTGTAGGACCACAAGGAGCATGGCTCTGCTGGCATACACATACCTTACTG
TGTTTGACATTTTCTGCCTGATCACATGTTTGATCAGCATCTGGGTTTCC
ATACAGAAGCCAACTTCTGCATTTGCATTTGGATATGAAAGATTCGAGGT
CCTTGCAGTGTTTACCAGCACAACGTTGGCTCAGCTGGCGCAACTGTTTG
TGGTTAAAGAAAGTATTGAGAGGCTGCTGCACCATCATGATGTCCATACT
GGGAGACTGTTGGTCGGCACTGCCTTTGGCTTTGCTGTCCACATTGTGTC
TACCTACTTTGTCACCAACAAGGCATTCCAGCATGTGTCTGAGGCCTCCA
GCTCCAGTTGGCTACAGGAGCATGTAGCAGACATGAGCAGAAGTTTGTGC
AGCGTCATTCCAGGACTGAGTAGCTTGTTACTACCCAGGATCAACCCTCT
GCCTCTCATCGCTGTGGCAGGGGCCCTGGCTCTCTTCATCACAGACATGC
TCATAGAGATCAATAATTATTTCCGTGCGGACACATTTGCAGCCATCTCC
ATAGCCATCATGACCGTCGGTACCATGTTTCCCATGTCTGTGTACAGTGG
CAGGATTCTCCTACAGACGACACCATCTCACATAATAGGACAGCTAGACA
AGTGTTTGAGAGAGGCATCAACTCTTGATGGGGTGTTGGAATTCAGGAAC
GAACATTTCTGGACCGTCTCCTTTGGAACTTTGGCTGGCTCACTTCATGT
TAGGATCAGAAGAGATGCCAATGAGCAGATGGTCTTGGCCCATGTCTCGA
ATCGCCTGTCCAACTTGGTGACCGTACTGACCATCCACATCTTCAAGGAC
GACTGGACAAGAGCATCCCTGTCTGCCTCCAACTATCCCTCCCGTCAACC
CTACACCAGCACACCCGCCAAGACCGGACTGGACCCCACCGTCCCGACCA
TCAACCCTTTCCAGTCCCTCCCTCCCCTGGCCCCTAACCTGTCCACCATC
ACCCCCATAGGTTCCCCTGCAGGCCCATCCCTGCATCAGCCCGGCAGTAA
TACTAGTAGACTGTACAGTAGTGGCATCAATGCAGCACCCAGTCATATAC
CTGCAGGGACCACTGGGGGCAGGATACCACTCAGATCCTATCAGCCTACT
AATCTATTTGGTGCTGGCAGTGGGACAGGACAAAAGTCAACGACAGAACT
TGGGCACAGATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01623.3-exon-Sc0000173-1570713199:14363..14779 | Blg01623.3-exon-Sc0000173-1570713199:14363..14779 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:15386..15428 | Blg01623.3-exon-Sc0000173-1570713199:15386..15428 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:16861..16926 | Blg01623.3-exon-Sc0000173-1570713199:16861..16926 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:17262..17342 | Blg01623.3-exon-Sc0000173-1570713199:17262..17342 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:17585..17620 | Blg01623.3-exon-Sc0000173-1570713199:17585..17620 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:18187..18281 | Blg01623.3-exon-Sc0000173-1570713199:18187..18281 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:18738..18786 | Blg01623.3-exon-Sc0000173-1570713199:18738..18786 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:19312..19431 | Blg01623.3-exon-Sc0000173-1570713199:19312..19431 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:19607..19709 | Blg01623.3-exon-Sc0000173-1570713199:19607..19709 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:20048..20095 | Blg01623.3-exon-Sc0000173-1570713199:20048..20095 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:20436..20504 | Blg01623.3-exon-Sc0000173-1570713199:20436..20504 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:20682..20726 | Blg01623.3-exon-Sc0000173-1570713199:20682..20726 | Branchiostoma lanceolatum | exon |
| Blg01623.3-exon-Sc0000173-1570713199:20957..22382 | Blg01623.3-exon-Sc0000173-1570713199:20957..22382 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000173 | genome | Sc0000173:14363..22382 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01623 |
|
