Blg01622.0 (mRNA) - B. lanceolatum

Overview
NameBlg01622.0
Unique NameBlg01622.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000173:125426..127195+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01622.0 ID=Blg01622.0|Name=Blg01622.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1770bp|location=Sequence derived from alignment at Sc0000173:125426..127195+ (Branchiostoma lanceolatum)
ATGTCACTGGAAGTCGGTACCGGCCCTCGTCTCTGTTCAATGAAGGTTGA TATAACCTGGCGTAGTACATGTATATCTATAGCCTTCCGGTATAATGTGA GACGTGAAGAACAGATGATGTAACGTTACAATCAATATAAAGATCACGCA TTTGTGTAAAACTATGCAAACTCACTTTACTCCGAGCTGATATTCCTGCA TGGTTCTCGTGATTTGTTCACTTGAGCTCCGATGTTGGTCTCCCCTTGTA GGTAACCCACCGGTTACCACCATCAACCCTGCCCTTTCTGAGCCTGAGAC CAAACATTTGCCAGTATATGGAGTAGCAATCATCTCTACGGTGACGGGAA TCTTCGGCATCGTGGGCACCATAGGCAATGGTCTTGTGATTTTGGCTTTC TGCACTTACAAGCAGGTACAATGTATGTTAGTATTGACTGAGTAATTCTG TGACTGCATCGATATTGGTTTTAATGGTACTTTTGTTCCTGTGCCTCATG TGGGATTATCTCAAAGTACACATACACACAGTCATTTCTCCTCAAATCGT ATACTTGTGTAGGCATATACCTTTTTGTAGTAGTGGACAACTTCAAGTCA ACCGTACACACTCATACCGCATCTTCAGAAAAGACTCTGTAGTGTAGCCG CATAATCCCCCTTTAGAACTCTTTTCCAGCTCGTTTGCTTGTGTATTCTG CTCAATGACATTTCAGAATCATCTGAGAATGGTGTTATTCCCACAGGTAC GAACTTCCGCCCACACCTTCATCCTGAGCATCAGCATCAGCGACATCCTC ATGACAGGTTTTCAGTATCCTACAGCAATGGCCTCCATGATCATCGGCGC CCCATCTCTCGGACACGCCATGTGTCCCGTACTAGGCTCCTTATTCTTCT TTAGTATCTACGTGTCGTTCTTGTCTATGGTCCTGATCGCCTTCAACAGA TGCATACACATCACGAAGTCAACAGACACATACAGGGAACTGTTCAGCCC TCTCAAGTCGTTCTTGTGGGTTCTGTTGTCCTGGGTTGTGAGTGGGTTGT TGGTAGCTCCGGGGTTTCTAGGCTATGGCGAGTTCGGTTGGAGCAAATAC CAAGTCTGTAGCATAGTGCCCGAAAATCCTTACAGTGCCTACTACATCTC ACACGTTTCTGGGATCTCCTATTGGCTTGTGTTTTGTTTAGTTGCCGGCA TCTATTTCAGAATCTACTTGTACGTGAAAGATTCTGTGGTCACCATGGCC GCTGCGAATCAAAACCTTGCAAACCCTGGGCAATACGTGTCCAGAAGGGT AATCCAACGAACAAAACACATGTTCATCATATTCTGTGTTTTCACAGTCT GCTCGGCTCCGAGTGTGTTGTTGTATAGCATCAATGTACACAAACGCTTC TTGCCAGATGCGGCGATAGTTGCGTTGACTACACTGTACCGCCTGAATCA TGTCCTGAATCCTTTTCTGTACGCCTGGAAGCTGCGCGTATTCAGGCGTG CTTTTAAGGCCCTCATTCGCTGCAAGCGGCAACTACCCTTCCAACCTACT GGAATTTAACCACCATACCTTCTGCCTAGTTGCCAGCCTTGTCTAATTTT TCTATGTGTTGTAGTCAAATTTTAAACGTCTAAATTATCTAGCACTCATT TTGTATAGTTTCCGTTTCTAAAGCCCTTGGGTCACTCGGCTAGCGCTATG CCAGCACTACAGCATGGGATTAACTCCACTGCTAGTAGTCTGTGTTTCAC TTCTATGTTTCCATAGGTAA

Coding sequence (CDS) from alignment at Sc0000173:125426..127195+

>Blg01622.0 ID=Blg01622.0|Name=Blg01622.0|organism=Branchiostoma lanceolatum|type=CDS|length=453bp|location=Sequence derived from alignment at Sc0000173:125426..127195+ (Branchiostoma lanceolatum)
ATGTCACTGGAAGTCGGTAACCCACCGGTTACCACCATCAACCCTGCCCT
TTCTGAGCCTGAGACCAAACATTTGCCAGTATATGGAGTAGCAATCATCT
CTACGGTGACGGGAATCTTCGGCATCGTGGGCACCATAGGCAATGGTCTT
GTGATTTTGGCTTTCTGCACTTACAAGCAGGTACGAACTTCCGCCCACAC
CTTCATCCTGAGCATCAGCATCAGCGACATCCTCATGACAGGTTTTCAGT
ATCCTACAGCAATGGCCTCCATGATCATCGGCGCCCCATCTCTCGGACAC
GCCATGTGTCCCGTACTAGGCTCCTTATTCTTCTTTAGTATCTACGTGTC
GTTCTTGTCTATGGTCCTGATCGCCTTCAACAGATGCATACACATCACGA
AGTCAACAGACACATACAGGGAACTGTTCAGCCCTCTCAAGTCGTTCTTG
TAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01622.0Blg01622.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01622.0-exon-Sc0000173-1570713199:125426..125441Blg01622.0-exon-Sc0000173-1570713199:125426..125441Branchiostoma lanceolatumexon
Blg01622.0-exon-Sc0000173-1570713199:125677..125840Blg01622.0-exon-Sc0000173-1570713199:125677..125840Branchiostoma lanceolatumexon
Blg01622.0-exon-Sc0000173-1570713199:126172..126440Blg01622.0-exon-Sc0000173-1570713199:126172..126440Branchiostoma lanceolatumexon
Blg01622.0-exon-Sc0000173-1570713199:127192..127195Blg01622.0-exon-Sc0000173-1570713199:127192..127195Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000173genomeSc0000173:125426..127195 +
Properties
Property NameValue
GeneIDBlg01622