Blg01567.2 (mRNA) - B. lanceolatum

Overview
NameBlg01567.2
Unique NameBlg01567.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000929:4904..11280+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01567.2 ID=Blg01567.2|Name=Blg01567.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6377bp|location=Sequence derived from alignment at Sc0000929:4904..11280+ (Branchiostoma lanceolatum)
GGAGAAGAATTTTCAAGATTGAAGTTCGGGTTAGTACTTTTATGCAGCCT TGTTTCCTTTCAGTGTATTTTAACATGCTTTCCTATGAGCAGCCATAACT TTGGGGTCAGCCCTAGTGCTAGTGACGCTGAAGAAGTGTGGATCATGGAT GTCACTCGAAATGTCCGGAAATGATCTCCAAAATCTATCCTGTAGTAAAG TTTACATTGTAATAGACACCATATCCATGTTACTATACTTTGCTTTTTAA ACAGCAGTCAATAACCATATGCACGCTTCATGTTAACTGCAGTTTAACAG TTCACCTGGCCGGAAACTGTATTTTCTGTCACGTTGATAAACGTAAGCCA TCCAGGTAAACAATACTAATATACAAGTTGTCTTACAATAGGAACTATCC AAACTCATTTTACATACGTACCAATTTCGCTTATTCACTAGTCGGACTTT GCCATGTTCAACCTGTTTTTCTAGTTTATTGTATAAAAGCAATGATTGGT TCTGTTAGTTCATTCTAGTAACGCTGAAGAAGGGTGGGTGTCACTCGAAA TGTCCGGAAATAATCTCCAAAAGTTTTCCAGTAGCAGAGTTTAAATTGTA TACGTTAAAAGAATATAGGAGGATTTCTCTCCACAAAAAACAAGCCTGTA ATGTTGACTGATTTCTTTCACATAACGAGTACGGTTGAAAGGATTGCATC ACATCCATAAACGACAATCTGTGTAAGAATCGGTAAGCAGCAATAGGCAC ATGATTAAAGTCCTATATTCATGTCTTTTTCTATTCCAGTATCTAAATGT CTGGAAGCAGAATTGAGCGAATGGAGCCACGCTATACCCTGGAACAGTTC AGCCTGCTGACACGTCTGCTGTCGATTGGTAAGAGACTTCATCAGACGGG CCTGCCAATGGACAGCATGCTCCAGGCCATTTACAACATGGAGGAAAGCT ATTGTTTGGGGTATGCTGCTTGGATCTTTCAAACTAAGACGAATGTTCAT TCAGATGGCAGAGATATTTAGTTTTTTTTCCTTTTCGACTTTTAAATTAC ACTAACAAATTACACTCTACGAACTGTTTTGCCTCGTGTGTTCAACATCT TCTTTATTTCGCAAAGAACTCATAAAACGACACATTTAAAACACTCGGAC AATATGAAGCGGTTTAAAAATCACCTCAGTCGGCCCCGTAAGCAGATCAA TAGAAATCTTTTGTCGCAACGGTAAAAAGTGCCGTGCATCAGCCATCAAT AATTCACTTATAAACATATATCTTTTAACTGCACACTTTGCATCACACAT CTTCTGCATGTTGTTTTTGTAGATCAGTACTGTTGTCTTAATATTCCATA TATGTAGAAGTGAAGCATTTCCACATAAATAATGGAAGTAAGGCATGCAT TTGCATTTGACGCATATCAACAGTTACATTAGTTTCGAGTGCCGCCGGAA GAGACTCATTTATGGAATGAATCCTATATTTTACCACCATGAAAATGCAG CATTTTCTCCTTTATCATGCAAGTTAGATCTTGATTTGTATAATCGATAT CTTTAGATAACTTTCTTTCTCAATTGGATAGTACGTGTCATCAAAATGCA TCGATTTCAAACTCCCCTCATTAATTATGCAAAACCGTGTTTCATCAGCA CAGAAATACTTACTTTATTTACTTAGTTTCCCTCCCATCAGCTAATATAC CGCTCAAATATCAATTCAATAGCTTGTCCAGAACAAAAGATATCAAGTTC TGCTGCAGTACCATGCCAAGCCGATACGGAGACCAAAATCGAATCATAAC GAGGTCTTATCGAGATAAGATAACAGAATACCAATAAAATCATTCAAGGA GTTCTCGAGTTATCGTGTTAAAGTCTGAATACGTTTGTTCTTTCTTGAAA ATATTGGAAAAAATCTGAAGTAACTCCAACATATCTCTTTATTCAGAACA ATTTTACATTTTAACGTGTAATTTTTACTATGTAATTTTTTGACTATTTG ANAAAAATTCTGAAGTAACTCCAACATATCTCTTTATTCAGAACAATTTT ACATTTTAACGTGTAATTTTTACTATGTAATTTTTTGACTATTTGAACAT GTTCTTACGGTTTGCAACGTTTTTCAAATGGCAGATCTAGGATATTTCAC CCATGATCATAGGTGCTAGTCAAGCTCTTTTGTTTGCATATTTTTGGATT TCACAGTCGGGTACTTCTGGCTCTTTTTCTTGAGGCATCTTTGCATGACA CCCAGGCATATTTTACAGTACTTTGGTAAGATTCAATCTACTGACGCATT TAAGAAATGCTTGAACATTTCACTACATGTTAGAACAAATGATAAATCTA TCATGCAGCAGTCTAGAAACTGACATCAATAACGTTTGCGTTGGAGTAGG GCAGAAAATATCTAAAACATCAAATAATTTTATAAATGGCTGTTGACAGT TACTTATCTCAGCCAGATTGTTACAACGGTTTCCAAAATGTTAGAGCAAC AGGCAACAGACATCCACGCGAATTTGTCGACTTGACTCTATTGCCTTATA TGTTTCTTGTTTTCCTTCTAGAAAAAAATTCTGTCAGCAAGAATATCATT CTGTATGCAAGAATCCTTGTTTTAAGCACAATAAAGGATCCATGTTTTGA GCATTAATAAGCAAGAAAGTTCAAGAACATTATTATAGTAGAATCAAATT TTCAAGAAAAAATATTTTAAAGGAAGAATCTTTAAGAATACCATATCTAA CCAAACAAAAACGAATCTTACAGTAAGACAGCAACAGACCATTTTTCTTA TTTTTCTAGAAAATTCTCATTGGAAAACATCGGGCTAGAAATAGTATCTT AACTTCAGCAAAAGAGGAATAAAATCATTGATGTAATAATTGACATAGAC AAGACTTCGCAGAGGTTTCTTGATTTTTTTTGTTTTTCTTTCTATGTGAA AATATTTCTCAACATAAGAAAACAAGAAAATAAAGAAAAAAACAAAAAAG ATTTTTGGTAGTGTATTTATTTACCTTTGTTACAGAGTACTGATAGGCTT CTATTGGTATTTTGTCAAACCTTGGTGCTTTGCCGCTTTTGAGGGCTTTC ATGCGCTCTTCAAGTTCACTGTCGCTAAGGTGGACTTCCTGGCTTACCGT AGTCTCACGCTGGCGGCGAGAGTATGCAGGTGGTGGGGCAAACTTTTGNA AGAAAGAAAAAAAAAGATTTTCGGTAGTGTATTTATTTACCTTTGTTACA GAGTAATGATAGGCTTCTATTGGTATTTTGTCATACCCTGGTGCTTTGCC GCTTTTGAGGGCTTTCATGCGCTCTTCAAGTTCACTGTCGCTAAGGTTGA CTTCCTGGCTTACCGTAGTCTCACGCTGGCGGTGAGAGTCTGCAGGTGGT GGGGTAAACTTTTGGGCAAAGAAAGTGCTCCATGATGACAAAAGTTGCTC TGAAGTCATAATTGGCTCACCCGCTGGGTCCATGGATTGCATTTTTGCTT TGCTGTTTGTCTTGTCACCGAGTATCTTGGTTAAGCGAGTCATTTCTCAT GAGTTTCCTGTTTGCTCCGCTACTTCGATGTCTCTTATTATACTGTCAAT GATACTTCGGTAACCTTTCCGGGTCGATTGTGAAATCACTTAGAGGCTTC CTCACGTCGTTGACTGTTCATGTTTTGGGAGTTTACTTGTCTGTGTGAGC GGGACGGGAGAGAGGTGCGTTTTGGTAGGAAAGCAGATGCTGGTTGAGAC ACAGAGGTTTTCCAACAACTCAGCGGGGTCATCTGGGTTGTACTTTTGGC AAGCAATGTTTGCGCTAACTCTGCTGTCAAAGTTCTGCAATAACTCGGCA TCATGCTGAAGGAGATTGTAATACAGCGTTTTTGTTGCTTTGTGCTTCAT TTTGATTCGTGTTTCCAACAGGCAGCTGATCATACCGTGATCGTAATGCC GTCCCCATCGTTTGCATGTCATGTCCCATTTCACTTTCCTGTCCTGGATT AAGGCTGCCCAGCGGGGTGATATGACATCATAATCGATTTGCAATGGCTT GTACTCTGGGTTTTTGCCGGGTAGGTCGCAGTTGATTTGCGTCTGTGGGG TTGGAAGTAAGTAGAGGCTGCTGTGAGGTTTGTTCTGCGTATCATGTCCC TAACGTTGGCTTTACTGCCGTTTTGTCCCTAACGTTGGCTTTACTGCCGT TGTTAGATGGCATCGCCCACCTTCCTTCGTGTTTATTGACCGGTCCAGTC TCGATAGAGTGTCCATTCTTTGTTGGTACTACTGTCGTCGTCCTCTCGTG TTTTTGCTGTCTTCCCCTTTATTAATAGACATGTCAGAACTAGTTTCATA CTCGATCTCGATATCAGAATCGTTGTCGGTTTCCGCGTCCGCACCTCCCG AGAACTCGTTGCTACAAATCAATAATATCTATTCTAATATCACATTGAAA GCATGACATATATCGGATAAGGAAACTTTGTAAATATTTGTAAAGAAAAC AATCAAAATCGCATAAGCTAATTAAGCGTCATAGTCTTCCACCTATGCAC ACACACTCGCCAATTTTTGTCACAAAGATCATTTACAGTTTGCTTTTTTT GTGATTGCTGTTGATAAATTGTTTCAGTCATAAAGATATTCTGACATGTT GTGTTAACAATTACTATTCATTATCATGATCTATGCAAAATGATTAAAAA GCATCTTATACTAAACATTACATTTATATTAAAAAGTCGTTATGGCACAC ATAAATATACTCCTGGGGTCAAAATGGACCCATACGGTTGGATTTAGGTC GGATCATCGAATGAGTTTCCGGAATTATTTCATATCCATTTGTTTTGTTG TATATTTAATTTTGACGGGAATACTCTGCCATTGACAATTAACTTTGACG ATTTCAGCGCATAAAATAACATAGATGACGCCATCATGTTCACCCTTCTT TAGCTCCTATGTTTTTTAGACAATTGATAGCTTGATAAGGTTCCATTAGT TTATATCCTGTTGTTAGACATTTGAATCCAATGCTGTTATCGTAACGTTG CAGGGAAAAATTGCCTGCGTCAGGAACTGCACCACTGCAAGTTTTCACAC ATGATCAGCTCACTCTGCTGACGCGTCAGCTGGCAATACATCAGAGGCTT CAGGAGACGGGTCTGTCAGATGACAGCATCATCTACAGCCTCTTCAAATT GCAGATGAAAACTGGGAACATCGATATCGATGGTATGTTATTGCATGCAA GCCAAACGTTCGAACTGAGTATTAATATTAAATCCTAGTTTTTCACCCAA AATGTATACTATTTTCGTCTTGAGCATGAACCGTTCTGAGTTTGATTTGT TTCCTGTCGTCGTATGTATATTTTCACAACTTATAGAAAGTCTCAATGGT GTCAAATGTGCCAACTTATCGGGTATGCAAAGCCGAAGAAAGATGTACTA GATACGTGCGAGCTAGTAATAAAAGTATATCTTAAGTTAATAGAAAAGTA TTGGGTTGAAAATACACCTACTCTACAGTTTCCCCCTACTATGCCTTTGA TAGGACTACATAGGAGTAACCCATGATGATGATGATGATTTAGTTAAAGA AGAATAAGAATTGAAACTATATGACGCATTTTCGGCAATCTTGGATCATC ACAGACGTCTGGGCTTTTTGTGGATATCTGGGATGGGGGGGGGGCATTCC CATCAATGCGCATAGTATTCTTGGATATACATGAGCTAAAGCTGGGTACA TCTAACAATCAACACCCATTGTGTTGGTTTCTCATAACCGGCAAACGACC TTTAGGTGTTTCACTTGTACACAAGCTTTGTACACGAGGAACAAGCTGCA TAACACATAAAACCTATTCTTAGTCGAATCCTTAACGTTTTCGAGGTTTG TCTCTCTTCAACCGCGGGGTCCCCGGCCTTACGTCCAATATGAGAGGACG CCCCTTACCGAATCTAGGTACTGATTTTCCCATGAGTAAAGAGATAGCTG TAAAGTGCATTTCCCAAGGTCACTGCATTGGGGCCAGGAATGGATTCTAG CCTTGAGATTCTAATTAAACAGGGCAAACCACAATACCAACATTTACATT TTTGCATTGCCTTCAAAACCGTTTCAGATCTCCAGAAAATACCTGAGGGG GAAGAGTCAGCAGATGAAGGAAAAGAGGGGGCAGAGGTTGAGGTCATCCC AAACACGGACACGTCTGCTGAACCAATGACAGCGGAGGAGATAAAGATAG AGGTGGACAGCATGATGGGGTAAAAGTTTCATTTGTTTGTTTCCTGTTTT TTATTTGTTCATTAAGTCTTCTTGGTGCCAGGAGGCTGAGTTGTTTGGTT TGTTTAAATTCCTGAACAAGATTCTAC

Coding sequence (CDS) from alignment at Sc0000929:4904..11280+

>Blg01567.2 ID=Blg01567.2|Name=Blg01567.2|organism=Branchiostoma lanceolatum|type=CDS|length=489bp|location=Sequence derived from alignment at Sc0000929:4904..11280+ (Branchiostoma lanceolatum)
ATGTCTGGAAGCAGAATTGAGCGAATGGAGCCACGCTATACCCTGGAACA
GTTCAGCCTGCTGACACGTCTGCTGTCGATTGGTAAGAGACTTCATCAGA
CGGGCCTGCCAATGGACAGCATGCTCCAGGCCATTTACAACATGGAGGAA
AGCTATTGTTTGGGGGAAAAATTGCCTGCGTCAGGAACTGCACCACTGCA
AGTTTTCACACATGATCAGCTCACTCTGCTGACGCGTCAGCTGGCAATAC
ATCAGAGGCTTCAGGAGACGGGTCTGTCAGATGACAGCATCATCTACAGC
CTCTTCAAATTGCAGATGAAAACTGGGAACATCGATATCGATGATCTCCA
GAAAATACCTGAGGGGGAAGAGTCAGCAGATGAAGGAAAAGAGGGGGCAG
AGGTTGAGGTCATCCCAAACACGGACACGTCTGCTGAACCAATGACAGCG
GAGGAGATAAAGATAGAGGTGGACAGCATGATGGGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01567.2Blg01567.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01567.2-exon-Sc0000929-1570713199:4904..4932Blg01567.2-exon-Sc0000929-1570713199:4904..4932Branchiostoma lanceolatumexon
Blg01567.2-exon-Sc0000929-1570713199:5693..5863Blg01567.2-exon-Sc0000929-1570713199:5693..5863Branchiostoma lanceolatumexon
Blg01567.2-exon-Sc0000929-1570713199:9957..10135Blg01567.2-exon-Sc0000929-1570713199:9957..10135Branchiostoma lanceolatumexon
Blg01567.2-exon-Sc0000929-1570713199:11031..11280Blg01567.2-exon-Sc0000929-1570713199:11031..11280Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000929genomeSc0000929:4904..11280 +
Properties
Property NameValue
GeneIDBlg01567