Blg01564.2 (mRNA) - B. lanceolatum

Overview
NameBlg01564.2
Unique NameBlg01564.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0001695:24..2701+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01564.2 ID=Blg01564.2|Name=Blg01564.2|organism=Branchiostoma lanceolatum|type=mRNA|length=2678bp|location=Sequence derived from alignment at xfSc0001695:24..2701+ (Branchiostoma lanceolatum)
CTGGAACAGTCCTACCTGACCGAAAATTCTACTCTACTCTACTCTACATA CAAGAAAGTAACAGATGCCTCAATGTACCTGGGTACGATAGTGCATTACA TATGCGCAAATGACTCTGGGTACGAGACTGTATGAGATGGCGCACCCCTA CGTGTGAATGGTCTCGTCCAGACGCCATAGTAACCACTCTGTTGAGAAAC GCAAGATGGCGGACAGCGAAGAGACTGCAGCGGACACTACAGCAGGTAAG GGCCGTTACAACTGTCTACACTATTATTGAGTAAATCCGAGCACTGACAT TTGTGGCAGTAATCATCAGTGTTGAGATAGGATGGATAATGCGTTCCCAA TGCGAACGATTTCTATGTAGTACAATAGAGACAGTAGAAAAACACTAGCA GACGGTAGACTACCTTGCCAATCTACACAAATTTATCACAGAGAAAGGTA TCGATCCAAAATCACAGATCACCTCCGCTTTATTGAAGCTGTAGATTGGA GTTGTTTACTGCAGTGTTAATAACCAAACATCACACTGTCACTTGGACAT CGCTTGGCACTGGTATTGAAACTGACAACAAACGACATAGAAATGTATGT AATGTTTGTAGATATTTTGATGACCTTTCCATCTTTACCTACAGTATCTT CTGTCTGTGTAATGTTTTCTCATTTCAATAAAAAGAAATAGACCATGAAT ACCATTTAAACAGCTGCTTTGAAAAGAAGGTAGTTACGTGAAGCTCACAT ATGTCTTATTATTGTCTACTGTCAAGAGCAGATATTTACTGATAAGGAAT CTCATTTTCAAACCAAACTGCTGGCAGTTGATTCACAGCGGATGGAGTAA GGTATGTTTATTTTTGAGTAGGTGATCAATTTCAGAAGGTAAAGCACTTA TCGAAAGGCACAAAAGGTAAAGAAACAATTCTTATATGACTCCCTCCCTT GTCATATTGCTGGTCTAATTTTGCCTCACTGGTACATATATGCATCAATG TTTCGGGTACTTTGCCTGAAAGGGGAAATTCCCGTCTAATTGATTGACTT TGGGACAATGTTGTAGTTGAATTGTCATCCCTTTTTATCCACCAATCAGT GGACCCTGAGTCAGGTCAGTCTGAGGCTAGTGCTGCCTCAGACAGTGTGC CAGTGCGCAAGTCTAAAAACCTGCAGGAAGCAACCCAACATCTGAAGGAA GAGGCTCTACGTCGCTTTGTCCTAGAAGGAGGAGAGGAAACATCTACAGA TAAAGGCCCTACTGGTCCTAGTGCTGATTCAACAATGCTGAAGAGTGGCA GTCCTGATGATAGGAATGACCAGAGCAGTGATGCTCATGCTCAGTCTGCA GACAAAAATACTGCTGATACACGCACTGTAGAAAACATGCCATCCAAAGG TTCTGACACTACCACTGACAAAGGTCCTGATGGTATGCAAGAAAATGCCC ACTCAGATGATGGTACTGTTCCCACCCATACAGCTAGTAACGTTACTGAA GGTACCCGTCTGGATACCCATGTTATCAACAAAGATACCAATGATACCTA TGCTATCCATGAAGATGATGCCCACACTACTGCAGAAGGTGGTGCCGCAG TACCTGCTGCAAAGGAGGTCCCTGCTGCAGATACTAGCACTGCTGGTAGC TCTGATAAGCAGGATACAGCAGCAATGGCTGCCTCATTGGAGCCAACAGG AGAGTCAAGCCAGTCCAACATCCCGGCAAATGGGAACAGTGATGTTGTAT CTGGGAAGGAAGAAGACCCTAGGGCTGCCAGCATCCAGGAAAACAAGGAT GGAACTCCGGTCCAGCAGCGGCAGAAAAATTCACACTCACCCGACAACAA CCCAGAGATGATTCCTCCTGGTAGGATTTAATGGATAGCCAATCTCTGCA CATACGAAGCTGAATATGCACTTATCACTGCACCCCAATCAGCAGCGTCA CAATCTGCATGCCCTGCACTTTTGCGCACTAATTTTCCCAATCCCCGTGT AATAAACTGATTTTTTGCATGGCAGTAATTTAAGCACTGCATGAAATATC AATCATACAATGAACCAAGGGTATCTGGTGCAATATTCTGAGATCTGTCA CTTCTTCTATGGTAGTTGCACTAATCTTTGTATCCTATGAAAATGTGTCG TAAAATTTCCTTGCAAGATAGTCTAAGCAGTAAGCACCCCTACACCATTA TCCATTCGCCTATAACCATCCACTTTAACTCCACCATCACCAGCAGTCAC AGATTACCACCTTCCTTAATGCCATTGTGCCACTAAAGCAACCTAATGTG CAAGCCATGTGCAATTTTTGTATTCACCCACTTTTAGCTCCAGTACATGT TATACACAAGCACAACAAGCCATATTGACCATCCATATTGCCACAAGTAC AAAAATGTAACAGGAGATACATTCCCCCCCCTTTCTTTCCACTTCCAGGC AGTTCTCCCCAAATCCCCAAAGACAAAGATGTCTGAAATGTTGAAGCCAT TAGAATCCAGATATCTATCTCCCATTTCCCTTACGTTATCTTCCCTACAG CATGCATGTTCAGTGCTTAAATAAAACCTGTGATTAATATCCATACTAAT CAAATGCATATCATCAATATACAATGTATTTCAGAGTCAAACCAACAGGA AACAGCTGCTCCTCCAACTGAAGATGCC

Coding sequence (CDS) from alignment at xfSc0001695:24..2701+

>Blg01564.2 ID=Blg01564.2|Name=Blg01564.2|organism=Branchiostoma lanceolatum|type=CDS|length=870bp|location=Sequence derived from alignment at xfSc0001695:24..2701+ (Branchiostoma lanceolatum)
ATGGTCTCGTCCAGACGCCATAGTAACCACTCTGTTGAGAAACGCAAGAT
GGCGGACAGCGAAGAGACTGCAGCGGACACTACAGCAGTGGACCCTGAGT
CAGGTCAGTCTGAGGCTAGTGCTGCCTCAGACAGTGTGCCAGTGCGCAAG
TCTAAAAACCTGCAGGAAGCAACCCAACATCTGAAGGAAGAGGCTCTACG
TCGCTTTGTCCTAGAAGGAGGAGAGGAAACATCTACAGATAAAGGCCCTA
CTGGTCCTAGTGCTGATTCAACAATGCTGAAGAGTGGCAGTCCTGATGAT
AGGAATGACCAGAGCAGTGATGCTCATGCTCAGTCTGCAGACAAAAATAC
TGCTGATACACGCACTGTAGAAAACATGCCATCCAAAGGTTCTGACACTA
CCACTGACAAAGGTCCTGATGGTATGCAAGAAAATGCCCACTCAGATGAT
GGTACTGTTCCCACCCATACAGCTAGTAACGTTACTGAAGGTACCCGTCT
GGATACCCATGTTATCAACAAAGATACCAATGATACCTATGCTATCCATG
AAGATGATGCCCACACTACTGCAGAAGGTGGTGCCGCAGTACCTGCTGCA
AAGGAGGTCCCTGCTGCAGATACTAGCACTGCTGGTAGCTCTGATAAGCA
GGATACAGCAGCAATGGCTGCCTCATTGGAGCCAACAGGAGAGTCAAGCC
AGTCCAACATCCCGGCAAATGGGAACAGTGATGTTGTATCTGGGAAGGAA
GAAGACCCTAGGGCTGCCAGCATCCAGGAAAACAAGGATGGAACTCCGGT
CCAGCAGCGGCAGAAAAATTCACACTCACCCGACAACAACCCAGAGATGA
TTCCTCCTGGTAGGATTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01564.2-exon-xfSc0001695-1570713199:24..268Blg01564.2-exon-xfSc0001695-1570713199:24..268Branchiostoma lanceolatumexon
Blg01564.2-exon-xfSc0001695-1570713199:1123..2701Blg01564.2-exon-xfSc0001695-1570713199:1123..2701Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01564.2Blg01564.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0001695genomexfSc0001695:24..2701 +
Properties
Property NameValue
GeneIDBlg01564