Blg01564.0 (mRNA) - B. lanceolatum

Overview
NameBlg01564.0
Unique NameBlg01564.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0001695:847..2701+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01564.0 ID=Blg01564.0|Name=Blg01564.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1855bp|location=Sequence derived from alignment at xfSc0001695:847..2701+ (Branchiostoma lanceolatum)
GCAGTTGATTCACAGCGGATGGAGTAAGGTATGTTTATTTTTGAGTAGGT GATCAATTTCAGAAGGTAAAGCACTTATCGAAAGGCACAAAAGGTAAAGA AACAATTCTTATATGACTCCCTCCCTTGTCATATTGCTGGTCTAATTTTG CCTCACTGGTACATATATGCATCAATGTTTCGGGTACTTTGCCTGAAAGG GGAAATTCCCGTCTAATTGATTGACTTTGGGACAATGTTGTAGTTGAATT GTCATCCCTTTTTATCCACCAATCAGTGGACCCTGAGTCAGGTCAGTCTG AGGCTAGTGCTGCCTCAGACAGTGTGCCAGTGCGCAAGTCTAAAAACCTG CAGGAAGCAACCCAACATCTGAAGGAAGAGGCTCTACGTCGCTTTGTCCT AGAAGGAGGAGAGGAAACATCTACAGATAAAGGCCCTACTGGTCCTAGTG CTGATTCAACAATGCTGAAGAGTGGCAGTCCTGATGATAGGAATGACCAG AGCAGTGATGCTCATGCTCAGTCTGCAGACAAAAATACTGCTGATACACG CACTGTAGAAAACATGCCATCCAAAGGTTCTGACACTACCACTGACAAAG GTCCTGATGGTATGCAAGAAAATGCCCACTCAGATGATGGTACTGTTCCC ACCCATACAGCTAGTAACGTTACTGAAGGTACCCGTCTGGATACCCATGT TATCAACAAAGATACCAATGATACCTATGCTATCCATGAAGATGATGCCC ACACTACTGCAGAAGGTGGTGCCGCAGTACCTGCTGCAAAGGAGGTCCCT GCTGCAGATACTAGCACTGCTGGTAGCTCTGATAAGCAGGATACAGCAGC AATGGCTGCCTCATTGGAGCCAACAGGAGAGTCAAGCCAGTCCAACATCC CGGCAAATGGGAACAGTGATGTTGTATCTGGGAAGGAAGAAGACCCTAGG GCTGCCAGCATCCAGGAAAACAAGGATGGAACTCCGGTCCAGCAGCGGCA GAAAAATTCACACTCACCCGACAACAACCCAGAGATGATTCCTCCTGGTA GGATTTAATGGATAGCCAATCTCTGCACATACGAAGCTGAATATGCACTT ATCACTGCACCCCAATCAGCAGCGTCACAATCTGCATGCCCTGCACTTTT GCGCACTAATTTTCCCAATCCCCGTGTAATAAACTGATTTTTTGCATGGC AGTAATTTAAGCACTGCATGAAATATCAATCATACAATGAACCAAGGGTA TCTGGTGCAATATTCTGAGATCTGTCACTTCTTCTATGGTAGTTGCACTA ATCTTTGTATCCTATGAAAATGTGTCGTAAAATTTCCTTGCAAGATAGTC TAAGCAGTAAGCACCCCTACACCATTATCCATTCGCCTATAACCATCCAC TTTAACTCCACCATCACCAGCAGTCACAGATTACCACCTTCCTTAATGCC ATTGTGCCACTAAAGCAACCTAATGTGCAAGCCATGTGCAATTTTTGTAT TCACCCACTTTTAGCTCCAGTACATGTTATACACAAGCACAACAAGCCAT ATTGACCATCCATATTGCCACAAGTACAAAAATGTAACAGGAGATACATT CCCCCCCCTTTCTTTCCACTTCCAGGCAGTTCTCCCCAAATCCCCAAAGA CAAAGATGTCTGAAATGTTGAAGCCATTAGAATCCAGATATCTATCTCCC ATTTCCCTTACGTTATCTTCCCTACAGCATGCATGTTCAGTGCTTAAATA AAACCTGTGATTAATATCCATACTAATCAAATGCATATCATCAATATACA ATGTATTTCAGAGTCAAACCAACAGGAAACAGCTGCTCCTCCAACTGAAG ATGCC

Coding sequence (CDS) from alignment at xfSc0001695:847..2701+

>Blg01564.0 ID=Blg01564.0|Name=Blg01564.0|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at xfSc0001695:847..2701+ (Branchiostoma lanceolatum)
ATGCTGAAGAGTGGCAGTCCTGATGATAGGAATGACCAGAGCAGTGATGC
TCATGCTCAGTCTGCAGACAAAAATACTGCTGATACACGCACTGTAGAAA
ACATGCCATCCAAAGGTTCTGACACTACCACTGACAAAGGTCCTGATGGT
ATGCAAGAAAATGCCCACTCAGATGATGGTACTGTTCCCACCCATACAGC
TAGTAACGTTACTGAAGGTACCCGTCTGGATACCCATGTTATCAACAAAG
ATACCAATGATACCTATGCTATCCATGAAGATGATGCCCACACTACTGCA
GAAGGTGGTGCCGCAGTACCTGCTGCAAAGGAGGTCCCTGCTGCAGATAC
TAGCACTGCTGGTAGCTCTGATAAGCAGGATACAGCAGCAATGGCTGCCT
CATTGGAGCCAACAGGAGAGTCAAGCCAGTCCAACATCCCGGCAAATGGG
AACAGTGATGTTGTATCTGGGAAGGAAGAAGACCCTAGGGCTGCCAGCAT
CCAGGAAAACAAGGATGGAACTCCGGTCCAGCAGCGGCAGAAAAATTCAC
ACTCACCCGACAACAACCCAGAGATGATTCCTCCTGAGTCAAACCAACAG
GAAACAGCTGCTCCTCCAACTGAAGATGCC
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01564.0-exon-xfSc0001695-1570713199:847..874Blg01564.0-exon-xfSc0001695-1570713199:847..874Branchiostoma lanceolatumexon
Blg01564.0-exon-xfSc0001695-1570713199:1123..1893Blg01564.0-exon-xfSc0001695-1570713199:1123..1893Branchiostoma lanceolatumexon
Blg01564.0-exon-xfSc0001695-1570713199:2658..2701Blg01564.0-exon-xfSc0001695-1570713199:2658..2701Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01564.0Blg01564.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0001695genomexfSc0001695:847..2701 +
Properties
Property NameValue
GeneIDBlg01564