Blg01513.0 (mRNA) - B. lanceolatum

Overview
NameBlg01513.0
Unique NameBlg01513.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:182143..191569-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01513.0 ID=Blg01513.0|Name=Blg01513.0|organism=Branchiostoma lanceolatum|type=mRNA|length=9427bp|location=Sequence derived from alignment at Sc0000046:182143..191569- (Branchiostoma lanceolatum)
GACAAAAGCGCTAGATTTCGCTGCAGCACTGTAGCATCACAGAGACGACA CAGCAAGCGCGTCCTTCGTACTTTCTTGGTTCAGAGCTCAGGATTTAAAG GTTTTCTAACATATGGCAGACTCGTACAACTTCGTGAAGTCGTCCAAGCT TAAGCTGAAGGGAGAGAAGAGCAGGTAAAAGCACATCCGTTTCGGAGCCG AGAAACTGCTTTGCCTTTCAGTTGCTCCTCTCTGCCCCCCTCCCCACTTC ACATTTCGGCTTGATGTTTTCTTTCGCTTATAATCTAATTAAGAAATTAT TGACGGACATGAAAATGATTTGCAAGCTACAGAGAGATATTTGACAATAT GTAAAAGCTTTGTGAATTCATGATTTTGTACCACACTTATACATACTTAT CACTAGTAGAGCAGCAAAATTATCATGATAACAAAAATTATAAATGTAAA TTTATAATTTTTTTTATCATGATATTTTTGCTGCTCTACTAGTAATAAGT TTTTATAAGTGTGGTACAAAATCATGAATCCACAAAGCTTTTACTATGGG CAAAAAAACAGTTCCAGATTTTATGCGAGTTGATGACTTAAGGGGAATCA GAAAGAGAAGTCTAAGGCTGCCTGATGAATTTGTTAGATGATCCGACCAG TTTGTATCAATACGAGCGATCGCTCTTCTATATTTACATGTACATAGGAG ATGCTACTAGTACTAGCTTCCTTACTACTAGTACTAGTAGTAGTAGTACT GTGAGTGGTAGGCAGAACAGTACTAGTGTTAACGTATCAGATTACTTAAG CCCCATCTCATTGGACCCATAGCACGTTGACGGCCTCACAATGTCATAAA TTAGATTTCTGTTCCCTTGACTTTATAATGGGGATATCATGCAGACTGTA CAAGTACATTTGTATGACTAAAAAGACAACAAAAGGTGTAAAAAAGATTT GTTTCTTATCAATGAAATTCGTTACTAGTAGTAACGGCACTGTCAAATCG CTCTGTCACACAAACTGCCCAAGTCACAGAGAGGTCACCAAAGTGCAGCG GGTCCAGTGCAGGGATCTCCCCAAAGAACGGAACAGTGGCGCTCCTCCAT TCTGTTCTAACCCCAGCTCCATCTTGTTGATTTTCAAAGTTAGGATATTT CTTCCAATATTTCCTTAGCTAAGCCATTAATTTTGCTCAAAAGTTGAGGT TTCATAAAGTGTAGACAACATGTAAAGCTGAAGTTGCAAAAAATCACTTC TATTTGTGTCTGGAAAAGACAAAATGCAACAGCTTCTAGGGAGGGGTGTG CGGCACCCCTCAAGATTTCCCTCTTGCGACACGTATCCTGTGCTTGGCAT CTCCCCCCCATCCTGCTCTATATTTATGGGGAGATCCCTGCAGTGGGATA GGGTCTTCAGCGATTAACATTTGATTAGCAGATTATTTACCAATCAATCT TTTTCCTACCACTGCGTCACCGTGATATTGTCGCAATTGCTTTTATTCTC CAGCCACAAGAAACACAAGAAGAAGAAGCGTAAGAGAGACAGAGAAGACG ACTCAGCCGGACCTTCAGTTAGCGAGCTGCGCCAGGACCAAGAACTACAC GGTTTGTATTTCTTTGTTTGTATCGCATTTCCAGTACAAGTACATACAAT ACTAACTTGCTAGACTATGACATGCTTCCTTGCACCATGGATCCGGCGCA GCTGTCTCCGTACTCTGGCCTTCACTAGTGTTTTTCGTCCCTTACATCTG ACACACCTCTGGTCGACGTCGGCGTGGCGTAACGGTTAGAGCGTTGAACT CGGAATCCGTAGGTCCCAAGTTCGATACTCAGCATGCCCCAATGGTGTAC CCTTGGGAAAGGCACTTTACACTACCTTCCTGGACGGTGGAGTGACGCCC ACCGAGCCTACTCGGCTAATCTGTCGAACTGGGTGCCAAAAACACCCTAC GGATTTGGTTGCCGATGTGCCAACATCCAGCACATTTGCCACTGAGAAGT GAGAACCGTTAAATTTTTTTATTTTCTGGTCGGCGGGACGGCAGGGTGGA TGTCTTCATCCTACTAGTACCTCCGGCACAGCCGCCTCTACTTCTGGGAT GTCTGTTTCCAGTTCCTATCCTTCCTTCTTATCCAGATGACAAAACTGCT CTCTACCCCTCTTCAGACACCAGTTGAACAAGCTGTGTCTGTGCCTTCCC TCTGATCTGTAGATCTCGGCATACCGGCAGGAGAGTGAAGCTCCAACGAA CCTACAAACACCTACTTCCACTGGGTAGAGCTGGGTTCTCCAGCCATTCT CTCTACACTGCTGGACTGTACTTGTTCCTCATACTTGCATCTCTTCTTCT CATATGCTGATTCAATATTTTCTTCCCATGCCAGGGGACAGTCAACTCCA CTATAACTTATAAGTTAGTTTAACCACTGACTTCTGGTCCGTGGACCACA AGACAATATCCGGTCTCAGTGAAGTGAAGTAAAGAAATACAGTAGGTTTG GAGTGTCATTTTTAAGGGCACAACATCGGGACTTACTTTGGATCTAAAAA TCTGAGTCAATCTAACCACAAGGCCACAAATGCCAAAGGCATGACAAATC TTGCATACAGAATATTGATATAAGTTATAAACCACTACTAGTAGTAATTA CTAAATATCAGTTATTTTGGTCAATCAAGATAGATGTTTTAATTTAGAGA CTCTTTTTGAGTACAATGTACATTTGTTGACATAGAAAAAAATATGAAAC CTGCAGTTTTGTCTCCATCTGCTAGGTGGCTGGTGGAGTGTGGAGAATTT TGACCAGATCAAGAACAACATTGCCATAGAGCTGGGGAACAGTAGCTATG TGATGGCCATGGACACTGGACTATTTACACTGGGCGCTCCTCATGCAGGT GATGTTTGTTTGTTTATTTGTTTGTTTGTTTGTTTGTTGTTTATTTGTTT GTTTGTTTGTTTGTTTGTTTGTGCCCATTGAGTTCAGAAGCAGTAGTCAT TTACAAGACTGCGTTGTATCTTTGGGAAAGGCACTTTACACAACTTTCCT TACTTCTACTACAGGGTACCTAACTTCATTTGTAGAGGTTGTACTAATAG TATTAGTAATACTAGTACAGGACTGATGGTTGAAGGAAATTGATGGGCTC AGCTTTCCAATAAAAACCCACTGCGGCTACAGCCTCAAAAAGGCTATGGG ACTTATGTAACTTTTACCTTTACCTTTTACCTAACACCTTAAGTTTGTAG GAAAAGGTACATGTATTTAAAGCCCAAACAATATACGTAATGAAACGGTA ATCACTACAACCAGTTCTACATAATCATGTAACCAATGTTCCCTGTTTTT TATGTAAATACAGATGGGGAGGGACCAGACCCAACAGAACAGCTCACAGC AATCGTCGTCTCGGAAACCAAGATCGCTCTGAAGTCAGGGTACGGGAAGT ACCTGGGCGTGAACTCCGAGGGCGTGGTGATTGGACGCGCGGAAGCCATC GGACCGCGGGAACAGTGGGAGCCTGTGTTTCAGGAAGTATGTAGAATATT TTCTCTGCCAAAAAATAAGATTGTGTCGTTTTTTGCAAAAACCAGATTCA CTTTAAAACAAACAAAGTTTATGCTGATGATCTTATAGGCAACTAAAGCA ATATCAGGGCAAAAAATGGACATGAAAAAAATGCTGAAAAAATTATGGTA CTATTGGTAGTGACCTTACTAACACTGTTTAGCACATTAATTTTGCGTAA TAACTTCACACTTTGGGCATTTTAAAACTGCGCAAAAACGAGCCGTACCA TGATGGCCTTAGTTTCGAAAACCTACGAAAACCCTGCAACAATTTTCATA TCACACAGACATCATATTTTTGCATTATAGATGTCACTATACATTGTGAT AGTGTTGTTTGAGCTAATCATGTATAGAAATGACTGAATAAATTGACTTT CAAATCCAATTTTCGGGCCCTAATATTGCTTGGGTTTCCTTTAAGTTTGA ACCGACACTGGGAATATGGATAAGTATCATGAAAATGTCATTTAGTGATT AAACTGTCATTTTGTCTTTACAGCAGCGTACTAGTATCCCAGCTGTGTAA GACTTCTGTTTTATTGCCAACCACTGGTCTTCCCTCTAAAGAAGCAGTAA TTTTCAGTAGGGAAACTTTAACTTTCAATCTTACGGGGATCTCTGGTTAG CAAAGCCCCCATTTTCCCCCCACAAAAAAGAAACGTACCGTCCAAAATAA GAACGTATAGGGTGGATTTTGAGGCTGAAAGAAAATAAATGTACCGGTAC GTTCATTTGGTAGATGGGAGTATTTTTCAGTGGGGAATCAGGTCTTCCCT CTAAAGAAGCAGTATTTTTCAGTGGGGAAACGGGTCAGAACTAATTCAAG CTCCAATTACATTGCAATACCATCCAAAAGAAAAGATGGCAGACTTCACT CACTTACCCATACTGCTTTGTCCCAGTCCCTTGAAATCTCACAGACAAAA ATAGCAGCACTAAGGATGACAATGCTGCATTTTGTATACTGTAAATGCAG AAATGTTCACGGTGTTTTTATGTTGCCGTTTTTTGCGGCGACCGTTTCAC CACAAACGTTAAGCCACCGCAAACTTTTTATCCAATACTGTTAGCAGTAT TGTGACTAAAGCACTGCCGCGAACTTAAAACCATCGCTAACACTCCATTT TCGCCTTAGCTCAAAAGAAAACAACATGCGAACTTAAATGCATTTACAAC TTGTATTGGGGATTGCAGAAACACAATACAGAAACAGACTAGCCAAGGCC GCAAAAAAATCGAAACTTAAATAATAATCAGTGATGAATTATTGTTATCT TGTCTGCAGGGTAAAATGGCGCTGTTGGCGGGAAACAGCTGTTTCGTATC GTGTAACGACAGCGGGGACATCGTCGCCACCACCAAAACAGCGGGCGATG GCGAGATGATCAAGGTTCCGTAAATTCACTTATTTTCGTGATGACTTAAT TTCATAGTCTGAGGAAAAAGGAGTCTTTTACAGTTTTTTAAAGTTTCGCG TTGAAACAATTTGTGTAATACAATGTTACCGCCACCTTGCAATTGAATAT TTCAAAATCAACAGTTGACAGGAAGGTTGGTTGTTTTGCCTTCGTCCTTT ATTTCCTTTTTTCTTTGTCTAATTTTCAATTTTCCAAATCTTTTATCATA CTGTTGGCAGAATTGCCAGTACTGTTCATCCTTGTGACCATCTTTGCATT GTGGACAAGTTAAGAGTACCTACATGTAATATGAAGCCTTGCATATATTA CTTTTAGCCTAGTAGATTTTTAATGACAATTTTTGATATTGGAATCATTT AGAAGAACCGCCTTCCATTCAAACGCTCAGGTGATATTATGATAACTTAT GACTTCATTTTCTGGTACATTTTTGTTACTTTAAAAAATTACAAAGATTT AAATTTTTTTGACCTGTGCATGTCTAAAAAAAACACTTTTTGTTGCTGTG TTCTTTCCACAGATCAGAACAAATGTAGAAAAAGTCAAGAAACAGAAAGT GGACGTACCGGATGAGGAGAAAGGCTCGCTGAAGGAGGCAGAAGTCAACT ATGTGTACGTGAAACTTATTTTTACCTCAACCATTTCTTTGGTAAAGCCG GCGGCCCCATGTATGAGGGAGCTTCTGGCATAAGCCTTACTTTAAGCGTC TGCACGTAAAAGAACCCAACACACTTATTGAGAAGAGTAGGGGTGATCCG GTGTGCTTGGCCAAAAATGCATATGGGTGCCGTGGCAAGGCCGCCGTGCA GTTGCACGAACAGCCCGAGATTATACCAGAGGTCCCTTCAGGGATGTGGG TCACATTTCATTTCATTTATTGATGTCTTTGCTTAGGCCATGTTGATTTG AATATGGAAGAAGATGTGAGAGAANGGTGTGCTTGGCCAAAAATGCATAT GGGTGCCGTGGCGAGGCCGCCGTGCAGTTGCACGAACAGCCCGAGATTAT ACCAGAGGTCCCTTCAGGGATGTGGGTCACATTTCATTTCATTTATTGAT GTCTTTGCTTAGGCCATGTTGATTTGAATATGGAAGAAGATGTGAGAGAA CAAAAATGCTTGAAGAGTCTAGTATTTCAACTGTATAATAAATTAATTGC ATACGACTCAATATAGTGAAGATTTGTTTTTTGGATCACTTTTGCTGCGG TATATAGCAAAGACTGTGAACTTAGAAATTCTGCAGATATTTCAAGCTCT ACACTACCGTAAATGCAGGAATGTTCACAGTGTTTTTTTTGCTGTGAACT CTGTAACCACAAAAAGCAGTTCCATTGTGTGACTGTAGCGCTACTACATT GTATTGTCGGTGTCAAACTCAAACTCTAAACCACCACGAACACTCCATTT TCTCCTTAGTATATATACCATGAAAGCAAACTTTTCTGCATTTTACAGTA TTACAGTTTCTGTAATTATTCACATTCTTTAACCTTCTCCCTGCTGCCTA ACTCTGTAACCAAAGGGAGTTGGGTGCCAAACGGCTGCTTCAGTGTGCTA AAGGTTAACTTCAAGAGTTATTGAAGTAGATGCCATATGAAAAATCTTTT TATGATTCATTTCCATGAAATGTAGTGTGTTCTCCTGTAATATGATGCTG TTTTGACCCATACAGGAAGAAGTTCCAAAGTTACCAAGACCGCAGGTTAA GAATCAACCCGGAAGACAGGTCCAAACTTAAGAAGGCCAAGGAGAAAGGC ACCCTACACGAGTCTCTTTTGGACAGGTGAGATCTACATGATTTATTGGT CAGAAATTACCCGTGCAATGGCAGCCAGTGCTGAATTGCTGCAGGGTTTA CAATCACATAATACATAACAGATTCATATTTGCTCCACACTTGTACTTTG TGAAACTGTCGCAAGGGTCTTGGCGGCTACCATTTAGCCCCAGCAGGTGA CCTCAATACGACCTTCCCCAACCGAAGTCAGGTACCCATTCACACCTGGG TGGAGTGGGGAAAGTCGTGTAAAGTACCTTTCCCAAGGGCACAACATCGG GGCACACTAGTGGTTTCGAACTCGGGACCTCTCGGTTCCGGGCGAAACAC ACTTACTGATTGCGCCACACAACGCCACATGTATGTCTTGTAAAAATAAG AAAGGCACTAACAGTCTTACTATTGGTGTTATTTAAACCATAGAAAATGT TCAATTTGCTTCTTACATATTTCAGTTCTAGATTCTTAGAAAGCTATGTC TAGATCTCAGTTTATATGCTGCATGTAAATCAATTCATTTTTGTGAGGAA TTTCACGTAATTTCGTATTAGGATCTTTTTCATTGTGTTTTGAGTTCGCA GTTGAAGCATTACTGTTGCACAGTGGTACTTTCATCAATGAAGTTTTATC ATTGAGGAGCACTGTTTAAAGGCACCCAGAGCATTTTATGAGGCTTGAAA ACTGGAAATATTCTAGTTGCTGTAATCTTTGTGAAATTGACAATTAATGC CATAATGATTGTTTACTACATTTGCATGCGGATTTCTAATCAAAAGTGCT CAAAAGCAGCACAAAAATAAGCTACATGGTGACCGTGATATTTTAGTTTC ACGCGCCTAGCGTAAATAGGCTGATAGCGTAGCCCCTCCCGCCTCTGTCA AACCGTAGAAATGCAAAATTAAAACATAGAAACATTTGAAGAACATGCAG TCACTCTCTCATTGGTCGAACCGCTAATTGTGATGGACAGTCAGGATCAG TCTATTAGGGCTTGGATTTTCTATCAGTTCTCACCACACAACGACATCGT ATCTTTAATGTCGATATGTAATGGTATTAATAGTGTTATTGAAACTTGCA ATGTGTAGGAATGACTAGAAATTTGAGTTTTTTTATTAAAGTTTCAAGCC TCATAAAATGCTCTGGATGCCTTTAATACATTAATACAAAACACATATTT GCGGTGTTATGATTTGCAGTAAGTGGTTTCTTACCACAGCGAATATTTCA AGACTTGCACATAATAGCTAACCTTTACTTTTTAAAACTCCAATAAAAGC AATTAATGTTACAATTTAGTTACCACAGTGCTGGTACTGATATGATGTAG TTCTTTACCATGTGAATAAAGATGATGATTTTATATCATATACTAAATTT ATATTTTCTTTGACTGTGTTACAGGAGAGAAAAGATGAAGGCAGACCGAT ACTGCAAATAAGGAAACAGCAGCACAATGGGGGAGGGGGGCACAGAACAT CTAGTCTTATTTGTAACACTTATTCAAGCATTTTTTCAACTTAAAAAAAA AGATAACTATACTTTAACATCAAATACACTCAAAGATTTTTGTGTTGAAA ATGATGGGTATTTTTAAACAAGTAGGTTTTCCCCCATTACCATACAAGGG ATCTAGCAAATAATTTGTAAAGGTTTTACTAGAAATACCGACATGGAACA GTTACTGTAAAGAGATTGGAAAGGTTTGAATTTGAAAGAGCTGAGGACAG AATAATCTTTACCACTTTGCACATGAAATAAAAGAGAGCTACATCTAATG TGTGATGTTAGTAATTGTGTTTGATTTTTGACTTAAATAAATAGACTTTT ACCTGTATCAATTGTACTTACCGAAGAATTGAAATTAAAATGTACACTTG CAAAAGTTGTAAGACAAACATAGCAGGTTATTTCAGTTAATCTGTATGTA TATTAATTCCATATCTTCTTTCATATTTCATCAATGTATGACGAAGACCC ACCTGATAAAGTTTATGGAGATTTAAATTTTGGTTCTTGTGTTGCAAAGT CATGATCAGCTTGCAAAAAAAGAAGGGAACGCGTAAAATTTATTTCCAGT CATTGTGGACTTAGAATTATATTTTGGTTAATATGAAATCCTTGTGTACA GAGAGAAATGTCTTTGATTAAAGTTCAGAAAGTCGAAAGGTAAATTTGAA GACAAAGAAGAATGTAGACACGAGTAAAAATAAAGAATATAGTGTTTCTA TGAAGTCAACCTGGAATAGCAATAAACCACTAAATGCAAAGAAACAACGA TGTGATGCAGTTCAATACCTCAAGTTTAATTTCCAGTTAAGTAATTTTAC ATGTCTTACTTTTTCTGACCATAATGACATATTGTCTAGCTCTTTTTACT AGCTTTTAGTTGGTATCAAATTCAAAGAAGCCCTGGATGTCTTTTTCATT GTGCAACAGCCAAACTGTTTCAGAATCACAGAAATGTGTAATACCATTTT ATAACAGTATTATCAACCAGAGTTCCTCATTCAACACAAATTAATCACTT TGGGGAGTTTTTGAAATTTGTTTATTCTGCTGTCTCATAGAAGTATGATC ATAAATTTCCTAAGATGTGTGTTATAAACTTTTACATCATTGCGACAAAA ATAAAGGTAGAGCTTTCAGCTCCAAAC

Coding sequence (CDS) from alignment at Sc0000046:182143..191569-

>Blg01513.0 ID=Blg01513.0|Name=Blg01513.0|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000046:182143..191569- (Branchiostoma lanceolatum)
ATGGCAGACTCGTACAACTTCGTGAAGTCGTCCAAGCTTAAGCTGAAGGG
AGAGAAGAGCAGCCACAAGAAACACAAGAAGAAGAAGCGTAAGAGAGACA
GAGAAGACGACTCAGCCGGACCTTCAGTTAGCGAGCTGCGCCAGGACCAA
GAACTACACGGTGGCTGGTGGAGTGTGGAGAATTTTGACCAGATCAAGAA
CAACATTGCCATAGAGCTGGGGAACAGTAGCTATGTGATGGCCATGGACA
CTGGACTATTTACACTGGGCGCTCCTCATGCAGATGGGGAGGGACCAGAC
CCAACAGAACAGCTCACAGCAATCGTCGTCTCGGAAACCAAGATCGCTCT
GAAGTCAGGGTACGGGAAGTACCTGGGCGTGAACTCCGAGGGCGTGGTGA
TTGGACGCGCGGAAGCCATCGGACCGCGGGAACAGTGGGAGCCTGTGTTT
CAGGAAGGTAAAATGGCGCTGTTGGCGGGAAACAGCTGTTTCGTATCGTG
TAACGACAGCGGGGACATCGTCGCCACCACCAAAACAGCGGGCGATGGCG
AGATGATCAAGATCAGAACAAATGTAGAAAAAGTCAAGAAACAGAAAGTG
GACGTACCGGATGAGGAGAAAGGCTCGCTGAAGGAGGCAGAAGTCAACTA
TGTGAAGAAGTTCCAAAGTTACCAAGACCGCAGGTTAAGAATCAACCCGG
AAGACAGGTCCAAACTTAAGAAGGCCAAGGAGAAAGGCACCCTACACGAG
TCTCTTTTGGACAGGAGAGAAAAGATGAAGGCAGACCGATACTGCAAATA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01513.0Blg01513.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01513.0-exon-Sc0000046-1570713199:191396..191569Blg01513.0-exon-Sc0000046-1570713199:191396..191569Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:189969..190066Blg01513.0-exon-Sc0000046-1570713199:189969..190066Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:188672..188794Blg01513.0-exon-Sc0000046-1570713199:188672..188794Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:188034..188206Blg01513.0-exon-Sc0000046-1570713199:188034..188206Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:186606..186710Blg01513.0-exon-Sc0000046-1570713199:186606..186710Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:185966..186057Blg01513.0-exon-Sc0000046-1570713199:185966..186057Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:184794..184904Blg01513.0-exon-Sc0000046-1570713199:184794..184904Branchiostoma lanceolatumexon
Blg01513.0-exon-Sc0000046-1570713199:182143..183395Blg01513.0-exon-Sc0000046-1570713199:182143..183395Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:182143..191569 -
Properties
Property NameValue
GeneIDBlg01513