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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000046:1207537..1215424+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01477.1 ID=Blg01477.1|Name=Blg01477.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7888bp|location=Sequence derived from alignment at Sc0000046:1207537..1215424+ (Branchiostoma lanceolatum)
TTGTCTTGTTCATCTTAGCAGACTCAGCTCAAGTGATCAATGTTTAATAT
ATTGACAAGAACGATGAAACAAATACAAAATCTCTATAGAAGGGATTTGG
CTTCAGCGTCATCGTCCCCGGTGGTTGCGGATAAATGCTGTGTTATGCGA
GACCTTAACAATCAACCAGCTGAAGTGAAAAGAAGTCCAACCTGTTTGTC
TGCTTGAACGTTTCACCTCTGACATCAAAGCGGCTGTGCAGAAATCACTG
TCAAGTATGCTAATGAGTAAAACCAGATTCCTTCCTGTGATCTTCGGTGG
TTCGACTTCTTTACTATCAAAATTGAAACACGACATACGCAAGGTAATAA
TTTCATTTGTCACAGCTTTAAATTCGGTGTTTTATGAAACGGGTGCAACA
ATATTTTAGACGAATCCAAGATGGCGGCGAGGGTGTGTACTCTTGACCCA
ACAGGTTGTGCCTAACACATTATAAATCGGGCTACCTAACGACATACTTG
ACTCTTTTTTTTTGTCTCTGCTTCTATGTTGTCTTTCTCCGCACAACTGA
TTCTTTTTCATTCCGTAATGTCAGTCTGCCGAGAAATCGGCAATTATTGA
CATGTGCCGGGTCAACTCAGCAGGTTAGGTGGGAACACGAAACAAAACAT
CCGGGAACACCGCTAACGCCAATGAGTCTGACCCTTAACTAGAGTTCCAC
GACCTGAAACCTAATAAAAATAAAGCTCTACCATCCTCCGCGGGTCGCTG
GGAAAAAAATTAGAAATTGGCCAAAATAGAGTCACTTTTATGAAGGGAGT
CGGCTACGGAGAATGTTACCCCCGGCAAATATTCTCCTTTTAGCCGGTTC
GGTTAGTCTGGTAGAGACTAATCAAAATGACGTTAACCTTTTGGAGTGAC
TTTCGTGAACATTTCTCATTGATAACGCAAATAAGGTCCTTTTTTACGTG
TTATGTGAGTTGATCAACTCCAACCAAAAACACAAGTTGTTTGAGTTGCA
AAACAGTTTATTTCTTATTACTTCATATGATAATTATGAATCCTAATTTT
GAAATTTGAGTTTCCGTGTATACATATTATGAACTTTGAAGACCAATATT
GAAATTGAACCTAACGAATTGAATGTGTGGTGCCTTACTTTGTTCTTAGA
CTATTTCACAAGACGTTGTTCTTCTTCATATATGTATATCTATTTAGTAT
CGGGCCGTTCAAGTCAAATACAAGACAATGTCGTCAGATCGTAGTGACGT
CATCGTGCTGTGTCCGTTCTCCAAAGAAAATAAGAACAGGATGGAAGGCC
TACGTAGATGTCCAACAGTACAGGTTTGTCTGACAATGAAACGCTTGTAC
AGTACAGTTAAAGTCATAGATTTACCCGACACTAATTTTCAACACTATTT
TTAACACTACGCTTTGACATCTCGTAACGAAAATACTGGGTTTTTGCATT
TTGGTTTATGTCACAAGTCATTCCCGCTCGACCAACAAATCGCGTACGTT
CTCGCGAGATTGTGCTCTCGAGAAAGTATATTTAAGATGGCGCCGGAGTT
GTTGAAATGGATCTATTGTCGCATTGAAACCTATACTTGCATTTCGGGAA
AAGATTGCATGGATGGTTGTTGCGTATTATTCAGTTGTTTTATCACTTAA
ACCGCTCCACACCATTTGATAGGTGAAGAAGGTGATTTTTAGCAACATCC
AGGGCAAGGAGACTCTCAAAGACTACGTGGAGCGAGCAAAGCAGGCAAGT
GACATCCAAGATTCCATTCTGTGGCACATTTCTACAGCATTATACAAATC
ATTTTTGTTGCGAAATGCATGCTGTAAACACAAAACATCAATGTCCTTTG
CGAATAGAACTTAATATTTGCCTGTACAACACAGCGATAGATGTGTAGAT
ATAAATGTGCACAATAACGTTTGTGCGCTAATCGGATCATGCGAAATATA
TTAATATTGGTAGTTTGTGATACAGATGTTCAGTGCGGACATTCAAATTT
CACAACTCAGCATATATTTTTAAAGCATCGATAGTCTTTAGCCTACCTAA
CAGGGAGTTCAAGACATGGTTTTGCCAACATTATCATAGAATTTCCCTGT
CATACGAACATTTTTTAATGAACACACACACACACACACACACACACACA
CACACACATACACACACACACACTCTCTCTTTCTTTCTCCCCTTCTCTCT
CCCTCTCTTTCACACAAACACAAACTCACGCACACATTGACTCTGTGTTT
GTAGCACACATATACCTACGTGCAAAAATAAGGACATAAGGAGGTAGTAT
TAACCACACAACAATAGACACACAAGCAAACAAACACACGCGCGCGCGCG
CGCGCGTGCATTACCTTGGTTGAAATAACACGCCATAATGTCATTTACTA
TTTATGTTAAATCTACCATTTTTTTCTTTCTATCAGATTGTGAAAAACGA
GAACGTGAACATCGTTCTCCCAACCGGTGACCTGTGTACGTTCGTGCACG
CCGCCATTGCCAGGGACTTCCCCCATATTCCCGGGCCCAGTGTTGAGTCA
TGCTACCTGGCGTTCCACAAAGCCTACACACGGCAGTACCTGGACCCGAG
CGAAAACCCAACCCCCTACGACATCTTGGATCTTGACTCACCCACCCTGT
CAGAAGACGCAGAGAGGGCCCTGGCAAAAGTCGGTAAGAGACTCACCGGA
ATGTTTCTCCGAACAGTTTAAGGTCAAGATATCGAGATCAGTTACTAAGC
AATATTTCAACATAGTTCACATTATTTATATGATTTACAGTAATAGCAAA
TACTACGGCAAAGGTAACGATAGCCCTTAATTAATCAGTACCTGGACCCG
AGGGAAAACCCAACCCCTTACCATATTTCGGCAAAAGTCGGTAAGAGACC
CACCAGAACGCTACTCAATTTAAGGCCAGGATATCAAGATTTTTTTCATA
AGCAAGAAGATAATCTTGCGATTTAAGTATTGGATATTTCACATGATTTG
CAGTGATAGTAAATATTACGGCAAAGGTAACGATAGCCCAATAACACTTT
TGAGGCCGGTGGGGCAGTATGTTGCCGTCCACTGTGTCAGAGGTGTGGTT
GTGGGAGGAGGAGACGGACCTTCTCCATCCTCCAAAGTCAGGTAACCGTT
CTTACACCTGGGTGGAGTGAAGGAAGATGTGTTAAGTGCCTTTCCCAAGG
AAAAAAAGTCAAGTCAGGAACCCTCGATCTCTAGCCTAATCACTGGGCCA
TCCTATGACATTGTTTTTGATGGACGCGTCACAATCTGACCTGAGTATTC
CATATGAATCTGTATTTGTTACAGAGAACTGATATACACAGCATTAAAAT
CAGACACGCGGATACTAAGTATGTTTACGTAACTCGTAACGTTGAACGGC
TTCCAAGAATTGCTTGTTGTGAATGATATGAAAATGAAATGAACATATTT
CATGAAAATTGCATTTTTTTCTTATCAGGTCTTCCGGCCTTTGTAAAGCC
TGCAACAGGATTTGACACCTTTGGCGTGAAAAAGGTGGAAAGCGTCGAAG
AAATGAAACTCGCGCTGCAGAATCTCCAAACAACGATGGAAGAAGATGCT
GGCTTTCTGTCAGCGCCAAGTGCTGCATTCTTTAGGTTGGCAGATTTGCA
TTTATAATAGATCAACGTAATTAGATAGTTATAGACCAATCTCTTGATCC
CGCCCGTTAACTCTCGGAAGACGACACGCAAAGTACACTTAAATGCTGGC
AATGCTGCTCCCTCTACTTGTCATTACCTAGCACTGCAGCTAAAAAAATT
ACGTTTTGATCAGATACGAGTAGGTCTTATTGAGACCTCGAAACGATTAC
ATACTGGTCCCCCTAGCAGATTGTTATAGTATTGTAGTTATAGCATTATA
TCTAATGATATAAAGATTGTACAGTAACCAGATTTGAGTGGCTGATAGCT
GCTTGTGCACTTGGATGTGCACCCTCCTCTAGCAGTGCTGGATCTCACTC
GGCAAATACTCGGCAAAACCTTCCGGGGACCAGTCCTACCCTTTTGAAAC
CATGGTTTGCGATTGAAAAACCTGTATTGTTTTCGCTGGTAAGTAAAGGT
GCTACCATGTTGGGTGTGACCATTTTGACGGGAGGGGTGTTTTTCCCTTT
AGTCTATTTGTCGCCAATGTTAACCTTATAACTCTGTTGTGCAAATCAGG
GATTATTTTAAGCAGTATCTGGACGTGGAAAAGTACCCGCTCGCCACCCG
AGATGTCGTGATCGTCGAGCCGTACGTGGACGCCGAGGCCCTCTGTACCG
CTGACGGTTGCATTGTCGATAAAAGGATCGTGCATTTTGCAGTGAGTTCT
ACATTGATTAAGTGAAAGATCTAGAGTTTTTTTTTCTTTTTAATTAATAC
TATGTTGCAGTATTTTAGTAACCGGATACCTACACCGGACTGCGCCTGTT
TGCGACAAACTATTGCGGAAGCTTTGACAATTATTAACCAATTTTCTTAT
TCGGTCACACTGACGTGCGACGCACACTAAAATACATGACCTCTGCAAAC
AAAATGGCCGCCCAAAGTTCGGGCAGTGAGATACCACAATAAGGCTAGCG
CTGTGTTTATTTCAATTGTAAAACTTTTGCAAATTTTTGGGCAGCACATC
CAATGAAGAAACATGTTTCCGGGTACGCGTTTTCTTTCTATTGAAAAATA
CACAACTGTAAAAACATATCCGGTCCGTCGAAACATTACATCCGAAATCT
GACCGGTAAAACGATTTTTATGACAGCTAACATTGCAACTAGCCACCATG
ATTGCTAAAACTGCAACTAGCCACCATCCGCAAGAGGCACTCTTGTGCTG
ACAGCGCCTGAAAGCATCACTCAGTACAAAAAAGTGCACATTCGACCTAT
CGCACTGTGCCGAAATTTTCCTACCTGATCCTGCCAGTAATACACCAACT
TTTACCTCAAATTCTTTTGATATCAGGTGTAATCGATGAATCGATAAGAT
CTATGATCCAACTAGACAAACGTGTTTTTGTTTACATTTTTTATATACGG
TACCACTTTGACAGTGCACACTTGGAGTGATGAACAGGAATGTGACCTTA
TGTTTTTTGCTATGTTTGTATTACTCGCCAGATAACAGACGAGCTCCGCT
TTGATCATCGAGAGGCAAAATTCATGTCCGTGATCTCCCCAACCTCTGAA
CCCGAGGGTGTACAGAGGCGGATGTGGGAACTCTATGATGGAGTCATGAA
CAGGATGATTCAGTTTGGCTTCAACAATGGTGTCACAGATATCGAAGTCT
TCAAAAAGAAAGATGGACAGGTAAGCCATTCTGAGTCACAGAAGTTTAAC
TAGCATCTGTCTATAGTATGTGGTCTATGTACCACTACTGAAAAGTTTTT
GCCTCATAGAAATACGGCAATAGCGGAACCCAGCATTGAGACATATAGTC
ATTTTTTTAGCGCACGTATATTTCATGTTGTTTCCATCCTTCCAGCAGAC
CCGATATGCTCGGTTCATTACCTCCCATAGCGGCCCTGCAATATCCCGCC
TGTGAACTCGCCTCTGGCGACGTTATTCATGAGTAATTAACTAGCTAGCC
TTATTTGGCACAAACAGCCGTTTTTGCTTTGAACCAAAAGTAGCGATACA
AAACTAAACCTGATTGGTTGATAGCATCCCAGCGTCCTTTGCTCTCTTGC
TCCAGATGAGCTTAAGCCAACTCTCTGATTGGCTGAAAGCTGTTTTGGTG
CTGACGAGTTCACAGGCTGGAAAGGGCAGGGCTGCTATGGGAGGTAATAA
ACCGAACATGCCTGGCCTGCAAATGGGAAAAGTTCCTTTTTTCCTAAATT
TTTTCCTTATTTGCAATCGAGAGCCATATTTTTTTCTTATTTCTTTAGCT
GATGCTGTGTGAAGTGAATGCAAGGGGGTCGAGTTTTTTGCGAGGAGTGT
ACGATGTCAGCCACGAGAATCTCAACCAGGACTATGTGTACCTGTCTGCT
GGCTACGGCATCCAGTCAGCTACACCCACTTTGACAGGAAGGTTCGCGAT
CGCTTACCCCGTAAAGTTTTGGGGTGTTGACAACCCGGGATCCGAGGAAC
TGATGGACTTTGACCAGGTAAGGCACAACGCTCATATTAGATCATTTCAA
AAACATGATCACCAGCTCAACAAATTCAAGTACTAATCGGAATTTTCGAC
TGGTTCTACGTATATATTAAAACATCTTCCCCAGTCTTCCTGAGTATCCT
GACCCAATCGCCCTTGACATTTCAGTTTTGTTTACGTGTGGCGTCATCAA
TCTGTCACAGGTTGTTGAAGAGTTTACACCCCCCTCATCCCGAATGAGAA
AGACCTTGAACATTTTAGTCATTAGCAAAATTAGAGTCAGTGTTCATCCG
CTGAAAATAGAAAGAGGCCGGTACAGAAAATTGCCTATACACAATAAAAT
TATTATTATATTTTTTCCCTTTTATCTACAGTTCAAAAAGCTTAAGTCGG
ATCCTGACGTGCGCTTCGTCCGGGAAGCAGGGCCTGGTCACTTCAGCATT
TTGTTGTTTACCTACGGTGACACCAGGGAATCCATGATGGAGAAACTTGT
TGATGTGCTAAAAGTCGTGGTAAAAAAGCCAGAACAACTGGCATACCCTG
TACAATATGGCATGTAAGATTATATTATTTGAAGGGGTGCCTAAGTATCC
TTACGCCTTTTACGGAACCCATACGGAATACAAAGTAATCTTACGGAAAT
TTTATAATCAACAACTCAAGAAACGCGTAAATTTTACAATTCATACATTC
AACTACTAAGAAACATGTGACTTTTGCGATATTCATATGATTTTGATAAC
TTAGTTCCTTAAAGCTAGAATTAATTCCATACAATCCATATGCTTCTTTG
CATTGCATTGGATTTATTCCACACAAATTGTATTGTGAAATTCCGTAAAA
TTAGCTTGTTTTCTGTAAAAGTTATCAGAATTCAAAAAAAAAAATTCGTC
TGCATATTCAAGCAGACTCGTAAAGCACTGAACAACTCACATGGATAAGT
AATTATTCAGTGATTTAACTTCAACATTAAATGCTTTGCAATGCTTCAAG
CTCTGCAGCTTATCTTCAAGTTGTTATTATAAATCTTAGTAACTTTCATA
CAAGCCTCAACTTAATATGGAAGGTCACTGATTTTGACAAAGCGAGACAG
ACTTGATCGATATCTCTGCTTGCAATTACAACATGACCGGACTTTCCATG
TGTAAGTCATGTTATGTGGATACTTTTTCCGAACCGTTTGGCCTAATCCT
GCCGTTAAGGCTATCCGGTTTATAGAATATATTCATGAACCGTCTAAACT
ACACGTTTGTTTCTGGCTAGAGACAATAAATCTAAACACCCCAAAAGTAA
CAATTATTGCAAAATCAAAACAGATTCTGTCTTGAAAACTATCTCTTATT
CATTCGAAACTATCTCTCACCCATTACAAAAATAGTAGAATGAAACAAAG
GATTAGAGCCAACTCTTTTCAAATTGAGATTTGTCGGCTCTATAGCACAC
TTTGGCTAATGCGAGACTGTGTCCAACATTTAACAATGGTTTGGGGAATA
AGTTCCACTTTAAAACAAATGGTTCAACCTAGTATGATAAATACGAACAA
ACAATGTTTACATTAATTCTATTGCATGTAAGACCGATATAATATAACCA
CATACAGCGATGGAGTTATTCAATGATTCATCATGCCCCGTTCATTATCT
GCCAATTCAAGTACAATTCTACAAAAAAAATACAGCATATTGTTACAAGT
CGCTGGAATGCCCTTCCTGGCACTGTAGTGACGGCTCCTACCGTTGAGTC
GTCACTACCAACACCATGATGATGATGATTATGATGAT Coding sequence (CDS) from alignment at Sc0000046:1207537..1215424+ >Blg01477.1 ID=Blg01477.1|Name=Blg01477.1|organism=Branchiostoma lanceolatum|type=CDS|length=1206bp|location=Sequence derived from alignment at Sc0000046:1207537..1215424+ (Branchiostoma lanceolatum)
ATGCTAATGAGTAAAACCAGATTCCTTCCTGTGATCTTCGGTGGTTCGAC
TTCTTTACTATCAAAATTGAAACACGACATACGCAAGTATCGGGCCGTTC
AAGTCAAATACAAGACAATGTCGTCAGATCGTAGTGACGTCATCGTGCTG
TGTCCGTTCTCCAAAGAAAATAAGAACAGGATGGAAGGCCTACGTAGATG
TCCAACAGTACAGGTGAAGAAGGTGATTTTTAGCAACATCCAGGGCAAGG
AGACTCTCAAAGACTACGTGGAGCGAGCAAAGCAGATTGTGAAAAACGAG
AACGTGAACATCGTTCTCCCAACCGGTGACCTGTGTACGTTCGTGCACGC
CGCCATTGCCAGGGACTTCCCCCATATTCCCGGGCCCAGTGTTGAGTCAT
GCTACCTGGCGTTCCACAAAGCCTACACACGGCAGTACCTGGACCCGAGC
GAAAACCCAACCCCCTACGACATCTTGGATCTTGACTCACCCACCCTGTC
AGAAGACGCAGAGAGGGCCCTGGCAAAAGTCGGTCTTCCGGCCTTTGTAA
AGCCTGCAACAGGATTTGACACCTTTGGCGTGAAAAAGGTGGAAAGCGTC
GAAGAAATGAAACTCGCGCTGCAGAATCTCCAAACAACGATGGAAGAAGA
TGCTGGCTTTCTGTCAGCGCCAAGTGCTGCATTCTTTAGGGATTATTTTA
AGCAGTATCTGGACGTGGAAAAGTACCCGCTCGCCACCCGAGATGTCGTG
ATCGTCGAGCCGTACGTGGACGCCGAGGCCCTCTGTACCGCTGACGGTTG
CATTGTCGATAAAAGGATCGTGCATTTTGCAATAACAGACGAGCTCCGCT
TTGATCATCGAGAGGCAAAATTCATGTCCGTGATCTCCCCAACCTCTGAA
CCCGAGGGTGTACAGAGGCGGATGTGGGAACTCTATGATGGAGTCATGAA
CAGGATGATTCAGTTTGGCTTCAACAATGGTGTCACAGATATCGAAGTCT
TCAAAAAGAAAGATGGACAGTTCAAAAAGCTTAAGTCGGATCCTGACGTG
CGCTTCGTCCGGGAAGCAGGGCCTGGTCACTTCAGCATTTTGTTGTTTAC
CTACGGTGACACCAGGGAATCCATGATGGAGAAACTTGTTGATGTGCTAA
AAGTCGTGGTAAAAAAGCCAGAACAACTGGCATACCCTGTACAATATGGC
ATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01477.1-exon-Sc0000046-1570713199:1207537..1207879 | Blg01477.1-exon-Sc0000046-1570713199:1207537..1207879 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1208734..1208859 | Blg01477.1-exon-Sc0000046-1570713199:1208734..1208859 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1209209..1209280 | Blg01477.1-exon-Sc0000046-1570713199:1209209..1209280 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1209973..1210219 | Blg01477.1-exon-Sc0000046-1570713199:1209973..1210219 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1211015..1211171 | Blg01477.1-exon-Sc0000046-1570713199:1211015..1211171 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1211736..1211877 | Blg01477.1-exon-Sc0000046-1570713199:1211736..1211877 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1212668..1212856 | Blg01477.1-exon-Sc0000046-1570713199:1212668..1212856 | Branchiostoma lanceolatum | exon |
| Blg01477.1-exon-Sc0000046-1570713199:1214018..1215424 | Blg01477.1-exon-Sc0000046-1570713199:1214018..1215424 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000046 | genome | Sc0000046:1207537..1215424 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01477 |
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