Blg01476.0 (mRNA) - B. lanceolatum

Overview
NameBlg01476.0
Unique NameBlg01476.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:706642..708610+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01476.0 ID=Blg01476.0|Name=Blg01476.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1969bp|location=Sequence derived from alignment at Sc0000046:706642..708610+ (Branchiostoma lanceolatum)
CCCTCCTGTAGCTTCTGCCGAGGAGTGAAGACTGTGTATTTGGTGAGTAT TTTCGGGAATTTCAACGTTATCTGTGACGGACATTAACTGGAAGGATACG TAACTGATAAAGGGATAAATGTGTTAAGTATTTGAGTAGATGCCGTATGG ATGTCTCCGGTGGCAAAAGACGCAGACCGACTTTTAGGTGGACGGAGAAT TGTGCTGTCTGCTATTGGCGCCCATTTAATATGAAACCGAAGTCGGTTCG GAGCTAAACAAATAGTAAACAATGGGTCCATACTTTGACTGGACTTTTAG AGGCCAGCTTACATGACTGTCAAGTGTGCTCAGAATATTGAATCGCATCT CTTACGTAAAAGTAGTGAACGTTTTCGATAGCGGCACTGATGTGCCCCGT GCCCCCCTCCCCCCAAAAAACAACAACTTTGGGAGAATTAAAAGCTACAT GTACTTAAGAAAATGTGACATGATTGTGATGTGTTCGTCACGAAGCTGTA AATAAAGCTTCCAATTGAAAGAGATTATGTGCAGCTGGTCACGTCAAAAG TCTAATGGGATAACAACTGTGTGTAGTGTAAATCAGATACATGTATATAT GTCTGTATATAATCTATTCTGTACTTTTAAGACTGAGTGAGGTAAAACAG TAACATGTAGGGAGGAAGCTGTAGGGAGTTAAGGACAATCCATGGCTTCC TTTATCATATCATAGAATAGTCAATTTCTTTTTCAAAGCTCCTAGTACTT GCAATTGAATGTCCTTTGTGAAAAGTCAGATTCTCTCTGGCTTTCCTGCA TGTCTGAGTGTTTTTCTCAGGGAAGAGGATGGTTTGATGTCTGCTTGATG CCAGCTTTCTTCTCTAACTTGTAGGTTGTACAAGGGGAAACCATGGTAAA ACACGGGCCACCCCCTGCAGTCTGGTACACGAGGCTGAAGAACTATGCAG AAGGCACCTACAAGTTCGGGAGGGGGGAAAGGCCCGGGAAGGGCAGTCCC TGGGACAAAATGGTGAAGGCCATTGACAAGTGCCCCAAGCAAACAAACCG GACAGCCACGCATGATGTACTGGGTCGACCAATCATCTGTGGATGCGGGT TTCATCTGGTGAGTTGTGTTCTAGGACGCCTGGCTCCTTTTTTTTCACAC GCTAACATTAGGTTTTCAATGTACAGAGGATGCCATCCATGAAATCAAGT TCAATGTGATCCTATTTAGGTTATCAGCTTGTTATTGTCAACTTGTTATT GTTTAAGGTCTCCTCCATCTTATTCTAGGACCTGGAAAGTTTTCTAAGGT GCAGAGTATCATTTCTTTAAAGTAAATTGCAACTAAGCTGTTGTCTGTCA ATGATCATGTGCATTAGCAGTTTCTGTAATTGTAATCTGACATACTTGTT GCTTATTGGTAATAAAAGGTGCCAAGCAATGCAGTTCCACCCGGAGCACA GTTCCATACCAGTGAGAGGGTAGAAGAATCTGGAGGTGCTGGGGTAGGAG CAGGGGATGGAGGCTTCAGGACTGACCCTGCAGCTGGGGAAGTGAAGACT GAGGATGTTAACCGTGGGGATGGACAGGAGATGGCGCACCTGGGGGCAGG AGAGGTGAGCTCCAGTGCAAGTGTTTCTGTTTGGCAGGATATGGTAGTTT TCTCCATAGTTTCATCTTAATTAGTTTTATGTGTAGGGATTTTTTACGTA AAGGGTTGTTGAATGGGCTACCATCTGCATGGCAATATCATGTGTATATA AGATATTATATGGCAACCATAGATGTTGCAAGGACTGTCTCTGTGGACTG TCTCTGTGAGGATGTTATGGAGATGTAGCATCATCATATGTAGCATACTG GTGTTTAATGTCAACGAAATATTGCTTGACGCGGTGTATCCTACGAATTC CACACATCATGTCTTGTCCTCTTTTGCCATAGTTCCCACTCCACGCTGCC CCTTCAGGACTGCGACTGA

Coding sequence (CDS) from alignment at Sc0000046:706642..708610+

>Blg01476.0 ID=Blg01476.0|Name=Blg01476.0|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at Sc0000046:706642..708610+ (Branchiostoma lanceolatum)
ATGGTAAAACACGGGCCACCCCCTGCAGTCTGGTACACGAGGCTGAAGAA
CTATGCAGAAGGCACCTACAAGTTCGGGAGGGGGGAAAGGCCCGGGAAGG
GCAGTCCCTGGGACAAAATGGTGAAGGCCATTGACAAGTGCCCCAAGCAA
ACAAACCGGACAGCCACGCATGATGTACTGGGTCGACCAATCATCTGTGG
ATGCGGGTTTCATCTGGTGCCAAGCAATGCAGTTCCACCCGGAGCACAGT
TCCATACCAGTGAGAGGGTAGAAGAATCTGGAGGTGCTGGGGTAGGAGCA
GGGGATGGAGGCTTCAGGACTGACCCTGCAGCTGGGGAAGTGAAGACTGA
GGATGTTAACCGTGGGGATGGACAGGAGATGGCGCACCTGGGGGCAGGAG
AGGACTGCGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01476.0Blg01476.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01476.0-exon-Sc0000046-1570713199:706642..706683Blg01476.0-exon-Sc0000046-1570713199:706642..706683Branchiostoma lanceolatumexon
Blg01476.0-exon-Sc0000046-1570713199:707516..707749Blg01476.0-exon-Sc0000046-1570713199:707516..707749Branchiostoma lanceolatumexon
Blg01476.0-exon-Sc0000046-1570713199:708060..708245Blg01476.0-exon-Sc0000046-1570713199:708060..708245Branchiostoma lanceolatumexon
Blg01476.0-exon-Sc0000046-1570713199:708599..708610Blg01476.0-exon-Sc0000046-1570713199:708599..708610Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:706642..708610 +
Properties
Property NameValue
GeneIDBlg01476