Blg01439.0 (mRNA) - B. lanceolatum

Overview
NameBlg01439.0
Unique NameBlg01439.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:1640151..1642857-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01439.0 ID=Blg01439.0|Name=Blg01439.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2707bp|location=Sequence derived from alignment at Sc0000046:1640151..1642857- (Branchiostoma lanceolatum)
ATGCCATTATCTCGTCCGGAGGTTCCATCTTGACTCGCACCGGCAGCCTC GCTTTGGTGCAAACTCACGCACGTTCACGCCAAGAATGTGCTCGCGCGAG AATACGATTCAGTATCTGGAATGAGGTCTATTGTGTAATGTTTCGGGTGT ACGGAAACAGCCGGGCTGTCTACCTGGCCTGTCCATATTTATGTCATTGT TGTAAGATTTTCACTGAAGAAAGATTGTTTTGAGACAGACTGCTTGTTGT GTACAAGGTATAAGATCTAGCCACATTGCTTCAATCTGAAATATGACATG AGGGAGCATGAAGGCCACATGTTCAGAAAAAAAAAAGAATACTAAGGGCA GAAATTTTTACTTGGGGACGGATACAAAAAAATTTTAAAAGAATTTTTCC ATCCATGGGAATTGGGTGGACGGATAAAAATGTCCAGCTGCAGCTGGCTA GAGCCTTGTACAGGGTTATTTGAGAAGTCTATGACTCTATTATGATACGC CAATGAAGGTTAGACATTATAGGTAATACAATAAGCCATGATTTGCAACT TTTTCAGGCCATCGTGAGGGCTGTGTACCAGGCGTTGGTCAAGGGTACCG GTACCGGTGCAGAAGAGAACCAAGGATTCGACTTGAGTGAAGCGTACGTA TTGTAGGGAAAGTTGTAGGCTTCAGTAAAAAGTCTTTAGTTTTGGGTGAA GGATAGAAAAGTCATACGTATATAGCCAATGTGGGTCACAATACTTTGGG CCGCTCAGAAGTAGAGAGGAAAGACAAAGCCTACACTTCTTTAGTCAACT GCAGGCAAGGTACATAAAGCATAGGTATGGTTGTGCTTATGCAATGTTTA TATGTACAAATACATTATGATGTTGAAAATACCAGTGTCCTGATGCATTA CAGTTTTGCAATCATTATGTTAAACCTCAATTTTTTTGTTAGGTCTCATG GAACTTGTCTCAAGGATACATGTATTGTGTTTAAAAGCTAGAGCCATATA TTGATATTATTATTAAAAAATCTCATCACCAGTGACATACCAACATGTTA TTCTAATTTACTTGTAGTTTGAAGTCGCCCTACAACCTGCGTGTGTTGAA CGAAGTGGTGCAAGAGGTTTTGAAGGACAGCGGAGGCGACAAGTGTGAAT TCTCTGCAAGGGAGATAAGAGGTGATCTCTGATATCTATTTGTATGTTAA TGAGCAGTTGGATTTATCATTATATTGCAATGTTATCATAATATCTGTTA TCTATTATGGAATTGCAGGATCTCACAAACAGGAACGCCTTCGCCTAGCA GCAGTATACCGCTCTTGTGTCGCCTGTCGCCTAATAAATTATGTGCATCG GAATGTAGATACTGATGGTAACTCTAACCTTAAGTGAAAAAAAATTGCAT CTGGACAACATCAGCAAAGCCATAACAGATACCTTTAGCAGGACATTTTT ACGAATTCAATTTTCAGAAAATGATTTCGAACACGTTTAATTCATTGTTG TAATTTTTCTACATGATTACAGAGAGACGAGGACCTGTAACACATAGGGG AGAATCGGTAAACATATTAAAATATTTTTGTAACAACAATCACGACAACA AAATCTGCATATAACGATAATACAAACTGCACTCTTGTTTTCTTGCCTGC AGAAAAAATGGCGATGATAACGACTCTGACATGTAAAGCACATTAAAAAC AGTGGAGGGTAATATGAGGAAATCATACTGATAAATGATACTAGACAGGA AATATTTATGACAAGATGACATTTATGTCTACCTCTGATGGGCTACAATT AGAAGAACAGCAGTGAATTCATGTATGTAAGTCTTTCATACTCTTTTCGT ACTTCTACTAAGTCTTTTGTGTTTACGACTTATTAAGTCTTTGGTAGGGC TTGCAACAGCAATGTTGAGTTTCCCTTGTTTCTTTTAGAAGCTGCCAAGC GGTATTACAGGTCGCTCAAGGATGATGCCGTCAGGAGGGGGAAGGGAAGG CACTTGGAGCATCGCAGGAGGGCCAGGAAAGGCCAGCGTTTGATGCAGGT GAAGTTATATACTTAAGCCTTTTATACTTAATTTACTCAATAGGATTATG CTCTTTGTTCATCCTGTGACAAAAGAGATCTCCATTGGAGGCGAAATTGC TAAAGAAATCGCTGTGACAGGCCCTCAAGCACCCTGACTTGGTCTTATTT TTCATACTCTATTAAATTCAGTGTCCAAAATACAATTATGCAATTTGCAA GCAATTTGCAAGATTTGCAAGTAGAACAAATCTGAACTTGCAAGTTGAAA ATACTGATGGATCGTGTAAGCAGTATGCAAAGGGGCAGACGTTAGTTTTG TGTTGCACAGTATAGGGTATAATATAATGATATAATAATGCAACATTTCT GTTACAGAAGGCAAACAGAAGAAGTAAGGCCATGGAGAAGTCCCTGGAGT CGTGGCCGGACAAATCTCGTAAGAGGGCACGTGAAATAATGGGAGTGAAG TACCAATCATCTGAATCAAGTGGAGACGAGCAGGACCCTTCTGTCTTCTC TGTCCGTCGTTTTGAATGGGAAACTCCAAAAATGAGGAAGTTAAAAGATG CACTTGATAAGATTTGCCCACAAAGGGGTACTCGTCGAGTAGTGGCCGAG GAATACTCGAACCGGCCAATACCCGACGGAACCCCCGGCTGGGCATTCAA GAGTTGA

Coding sequence (CDS) from alignment at Sc0000046:1640151..1642857-

>Blg01439.0 ID=Blg01439.0|Name=Blg01439.0|organism=Branchiostoma lanceolatum|type=CDS|length=621bp|location=Sequence derived from alignment at Sc0000046:1640151..1642857- (Branchiostoma lanceolatum)
ATGCCATTATCTCGTCCGGAGGCCATCGTGAGGGCTGTGTACCAGGCGTT
GGTCAAGGGTACCGGTACCGGTGCAGAAGAGAACCAAGGATTCGACTTGA
GTGAAGCTTTGAAGTCGCCCTACAACCTGCGTGTGTTGAACGAAGTGGTG
CAAGAGGTTTTGAAGGACAGCGGAGGCGACAAGTGTGAATTCTCTGCAAG
GGAGATAAGAGAAGCTGCCAAGCGGTATTACAGGTCGCTCAAGGATGATG
CCGTCAGGAGGGGGAAGGGAAGGCACTTGGAGCATCGCAGGAGGGCCAGG
AAAGGCCAGCGTTTGATGCAGAAGGCAAACAGAAGAAGTAAGGCCATGGA
GAAGTCCCTGGAGTCGTGGCCGGACAAATCTCGTAAGAGGGCACGTGAAA
TAATGGGAGTGAAGTACCAATCATCTGAATCAAGTGGAGACGAGCAGGAC
CCTTCTGTCTTCTCTGTCCGTCGTTTTGAATGGGAAACTCCAAAAATGAG
GAAGTTAAAAGATGCACTTGATAAGATTTGCCCACAAAGGGGTACTCGTC
GAGTAGTGGCCGAGGAATACTCGAACCGGCCAATACCCGACGGAACCCCC
GGCTGGGCATTCAAGAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01439.0Blg01439.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01439.0-exon-Sc0000046-1570713199:1642837..1642857Blg01439.0-exon-Sc0000046-1570713199:1642837..1642857Branchiostoma lanceolatumexon
Blg01439.0-exon-Sc0000046-1570713199:1642215..1642300Blg01439.0-exon-Sc0000046-1570713199:1642215..1642300Branchiostoma lanceolatumexon
Blg01439.0-exon-Sc0000046-1570713199:1641687..1641790Blg01439.0-exon-Sc0000046-1570713199:1641687..1641790Branchiostoma lanceolatumexon
Blg01439.0-exon-Sc0000046-1570713199:1640810..1640919Blg01439.0-exon-Sc0000046-1570713199:1640810..1640919Branchiostoma lanceolatumexon
Blg01439.0-exon-Sc0000046-1570713199:1640151..1640450Blg01439.0-exon-Sc0000046-1570713199:1640151..1640450Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:1640151..1642857 -
Properties
Property NameValue
GeneIDBlg01439