Blg01401.1 (mRNA) - B. lanceolatum

Overview
NameBlg01401.1
Unique NameBlg01401.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:1250560..1252469+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01401.1 ID=Blg01401.1|Name=Blg01401.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1910bp|location=Sequence derived from alignment at Sc0000046:1250560..1252469+ (Branchiostoma lanceolatum)
TCAATGTTTGCAATGATTCTTTTAATACATAAAACGAAATCGATCTATGT TTGCTCAAAAAAAATAATTTACAATGTCGGGAGAATACCTCTTAAAGTAG TAACTGTATGGATGGTTTTATCAAATGTTAGAAGAACATGTATATTTCAC ATAAGGTTGCTAAAACTATGTTGTTGAATAGTTGCAAAATTGATGCTTTG AATTAATTTCAATTTCAACTAAGATACCCAAGCCATCTGTTTCTTAAGAT AGCCAAGCCAAACCATTGATTTCACACCTTGTGGTGGACATTTCACACTT GTTGGTTGGGTCCTTTATCCCAACCTGTAATACGCTTTGTATTGTAAATG TGATTGACACCTTCAATTCATATTCATTTCGACTTAGAGACCCAAGCCAT GTCTTTTGTTGATATACTCAAGCCAAGCCAAATCTTCTTGACATTTCACA CATTAAAGTGGGCCCTTTATCCCAATATGTGAAAATCTTTGTCTTGTAAA CGTGAGAGTTGCTAAGTGTTGCTGACAAAAATATTTTCATCTTTGATTTA GATCATCCAAGTACAAAGTGGGATGGAATCCCATGTGGATGGACATCCCA AAGTATCACTGGTTGGTGCCCGTCTACGACGAGGCTAATGGAGAACAGGT CATCAGGATGCTGTGCAGCACCTGTAGGCTGCCTAACCAGGCACAGGACA ACGGGGAAATGTGGTGGTCACGTGACCCCGTTGTCAGCATGAGAATTGAC AATGTCAACCGACATTGGAGGTCGGACCAACACAAAGCAGCAGGGAACAA GGAGGCAGCCAGGGTTGCCGCGGTAGCGAATGGCGGCATCCTCCAGGCCT TCCAGTGCCAGGTATGACTCGCCTTTAACGTCTCTCAAAATGATTTTTGA TTTTGTAAGACAATGCAACATTATGATATCAATCATTATTTGCCATCAAT TTTACCACTGCGTGTAATTATAACACTGCTTTTCTATCAATCTATTTCAA GGTGTCACTGGAAAGAACGGCTCTCATCACCGCCATGAAGTGTCTGTACT TCCTGGCCAAGGAAGAAATAGCCCACACTACAAAATTCTCCTCACTTCTG GACTTTGCGAAGATCCACATGGGTTGTGATGTGCTCACACATCTCACCAA AGAGTCCAACGCAAAGTACAGGAGTGAGAGAATCCTTCTGGAGCTACTTC AGGTGGGCTTTTTCTAATGCCTTATTCTCTATCTATTTAAATAGATAAAA ATATCTAAATATATACCAAGAAACTTAGAGGTCGTTTTTTCTGTATTCAA TCATGTCCTGTATCAAATCTAACAGGTGATGGCGGGACAGATTCAAAATG GTCACCAGGCACTGCTGAAGGCGTCGGTGTTCTTTGGCCTCCAGTGTGAA GAGACCACAGACATCAGCACGACGAAGGAGCTGGTACTGCTGACAAGGTG AGTCTTTGTAATCTGCTGACAAGGTGAATAGACAGAAGCTTGGAAAACAA TGACTTACCTGAAAATAGCAACTAACCAATGTCTAACCAATGAAATATGT ACAATGTTATTTTATGTTGCAGACTCATCACAGCGAATGGAGAAGTGGCC AACAGGTTCGCTGCGATGATCCCTGTGCCTGATGGGACAGCCCGCACCAT CACAGACCTCATTCTGGGCTGGCTGCGGGAGAAGAACCTGGACATCAAGA GGCTCCTCGGGTTTGGGTCTGATGGTGCCCCAGCGATGACAGGTAGGTAG ATACCATTCATGAATGGACATTAACACATTTTGAAATTAAGAAATTTGTA TCTGATATAAATATAATACAGTTTATATAATGTTTTACTTGCTTACTGAA GAATCACAAAATAATGCTAACAATTTACCTGTAATCCCCTGCAGGACGGA GAAACGGTGT

Coding sequence (CDS) from alignment at Sc0000046:1250560..1252469+

>Blg01401.1 ID=Blg01401.1|Name=Blg01401.1|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at Sc0000046:1250560..1252469+ (Branchiostoma lanceolatum)
ATGTGGATGGACATCCCAAAGTATCACTGGTTGGTGCCCGTCTACGACGA
GGCTAATGGAGAACAGGTCATCAGGATGCTGTGCAGCACCTGTAGGCTGC
CTAACCAGGCACAGGACAACGGGGAAATGTGGTGGTCACGTGACCCCGTT
GTCAGCATGAGAATTGACAATGTCAACCGACATTGGAGGTCGGACCAACA
CAAAGCAGCAGGGAACAAGGAGGCAGCCAGGGTTGCCGCGGTAGCGAATG
GCGGCATCCTCCAGGCCTTCCAGTGCCAGGTGTCACTGGAAAGAACGGCT
CTCATCACCGCCATGAAGTGTCTGTACTTCCTGGCCAAGGAAGAAATAGC
CCACACTACAAAATTCTCCTCACTTCTGGACTTTGCGAAGATCCACATGG
GTTGTGATGTGCTCACACATCTCACCAAAGAGTCCAACGCAAAGTACAGG
AGTGAGAGAATCCTTCTGGAGCTACTTCAGGTGATGGCGGGACAGATTCA
AAATGGTCACCAGGCACTGCTGAAGGCGTCGGTGTTCTTTGGCCTCCAGT
GTGAAGAGACCACAGACATCAGCACGACGAAGGAGCTGGTACTGCTGACA
AGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01401.1Blg01401.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01401.1-exon-Sc0000046-1570713199:1250560..1251420Blg01401.1-exon-Sc0000046-1570713199:1250560..1251420Branchiostoma lanceolatumexon
Blg01401.1-exon-Sc0000046-1570713199:1251561..1251761Blg01401.1-exon-Sc0000046-1570713199:1251561..1251761Branchiostoma lanceolatumexon
Blg01401.1-exon-Sc0000046-1570713199:1251885..1252301Blg01401.1-exon-Sc0000046-1570713199:1251885..1252301Branchiostoma lanceolatumexon
Blg01401.1-exon-Sc0000046-1570713199:1252454..1252469Blg01401.1-exon-Sc0000046-1570713199:1252454..1252469Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:1250560..1252469 +
Properties
Property NameValue
GeneIDBlg01401